Dictyostelium_discoideum_anatomy
type: Ontology
has date: 15:03:2010 17:51
saved by: Pascale
has default namespace: Dictyostelium_discoideum_anatomy
comment: This is an OWL translation of an ontology whose native representational form isobo. The translation was performed using the oboInOwl xslt library. For details, see http://www.berkeleybop.org/obo-conv.cgi

vegetative amoeba
type: Class
has definition: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#1
has broad synonym: amoebae
has exact synonym: vegetative cell
has exact synonym: vegetative cell (sensu Mycetozoa)
has OBO namespace: Dictyostelium_discoideum_anatomy
has db xref: CL:0000263
subclass of: single cell organism

http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#1
type: Definition
label: Unicellular haploid myxamoeba that feeds on bacteria by phagocytosis and divides by binary fission. The size of vegetative cells range from 12-20 microns by 8-12 microns. The cells exhibit a roughly rounded but rather irregular shape.
has db xref: DDB:pg
has db xref: DDB_REF:5048
has db xref: PMID:4338436

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

DDB_REF:5048
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_5048

PMID:4338436
type: DbXref
has URI: http://purl.org/obo/owl/PMID#PMID_4338436

amoebae
type: Synonym

vegetative cell
type: Synonym

vegetative cell (sensu Mycetozoa)
type: Synonym
has db xref: CL:0000263

CL:0000263
type: DbXref
has URI: http://purl.org/obo/owl/CL#CL_0000263

CL:0000263
type: DbXref
has URI: http://purl.org/obo/owl/CL#CL_0000263

aggregation territory
type: Class
has definition: Area covered by a group of chemotactic cells converging toward the same aggregation center. Can reach a diameter of up to 1 cm.
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: multicellular organism

Area covered by a group of chemotactic cells converging toward the same aggregation center. Can reach a diameter of up to 1 cm.
type: Definition
has db xref: DDB:pg
has db xref: DDB_REF:5048
has db xref: DDB_REF:5054

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

DDB_REF:5048
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_5048

DDB_REF:5054
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_5054

loose aggregate
type: Class
has definition: First adherent mass of cells observed during development, relatively flat with indistinct borders.
has exact synonym: loose mound
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: multicellular organism
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#17

First adherent mass of cells observed during development, relatively flat with indistinct borders.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

loose mound
type: Synonym

develops_from
type: ObjectProperty
has OBO namespace: Dictyostelium_discoideum_anatomy

mound
type: Class
has definition: Hemispherical structure composed of post-aggregative cells that are undergoing differentiation.
has broad synonym: pseudoplasmodium
has exact synonym: tight aggrgate
has exact synonym: tight mound
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: multicellular organism
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#25

Hemispherical structure composed of post-aggregative cells that are undergoing differentiation.
type: Definition
has db xref: DDB:pg
has db xref: PMID:52566

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

PMID:52566
type: DbXref
has URI: http://purl.org/obo/owl/PMID#PMID_52566

pseudoplasmodium
type: Synonym
has db xref: DDB_REF:5048

DDB_REF:5048
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_5048

tight aggrgate
type: Synonym

tight mound
type: Synonym

tipped mound
type: Class
has definition: Hemispherical structure composed of post-aggregative cells that are undergoing differentiation and that have formed a tip.
has broad synonym: pseudoplasmodium
has exact synonym: tipped aggregate
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: multicellular organism
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#32

Hemispherical structure composed of post-aggregative cells that are undergoing differentiation and that have formed a tip.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

pseudoplasmodium
type: Synonym
has db xref: DDB_REF:5048

DDB_REF:5048
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_5048

tipped aggregate
type: Synonym
has db xref: PMID:7553878

PMID:7553878
type: DbXref
has URI: http://purl.org/obo/owl/PMID#PMID_7553878

standing slug
type: Class
comment: Synonym from Kessin book p. 166.
has definition: Cylindrical structure that is formed by elongation of the mound under the control of the tip. The elongating tip is called the first finger.
has exact synonym: finger
has narrow synonym: first finger
has broad synonym: pseudoplasmodium
has OBO namespace: Dictyostelium_discoideum_anatomy
has db xref: ISBN:0521583640
subclass of: multicellular organism
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#40

Cylindrical structure that is formed by elongation of the mound under the control of the tip. The elongating tip is called the first finger.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

finger
type: Synonym

first finger
type: Synonym

pseudoplasmodium
type: Synonym
has db xref: DDB:http://preserve.nal.usda.gov:8300/jag/v50/v50i02/500135/a500135.htm

DDB:http://preserve.nal.usda.gov:8300/jag/v50/v50i02/500135/a500135.htm
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_http://preserve.nal.usda.gov:8300/jag/v50/v50i02/500135/a500135.htm

ISBN:0521583640
type: DbXref
has URI: http://purl.org/obo/owl/ISBN#ISBN_0521583640

migratory slug
type: Class
has definition: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#41
has related synonym: grex
has broad synonym: pseudoplasmodium
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: multicellular organism
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#51

http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#41
type: Definition
label: When the conditions are not optimal for the completion of development, the standing slug bends from a vertical position to a horizontal position, producing a migratory that slug has the ability to migrate towards more favorable environmental conditions. The slug is cylindrical in shape with a rounded, tapering region at its anterior end that is raised with respect to the substratum. It usually measures between 0.8 to 1.2 mm in length with a diameter of 0.15 to 0.25 mm. Slugs sense and respond to light, temperature and acidity, and do not enter culmination until the conditions are optimal. The slug can move at a speed of 0.5 to 2 mm per hour. A trail of slime is deposited on the surface during migration.
has db xref: DDB:pg
has db xref: DDB_REF:439
has db xref: DDB_REF:5048
has db xref: DDB_REF:5053
has db xref: DDB_REF:5054

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

DDB_REF:439
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_439

DDB_REF:5048
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_5048

DDB_REF:5053
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_5053

DDB_REF:5054
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_5054

grex
type: Synonym
has db xref: ISBN:0124561500

ISBN:0124561500
type: DbXref
has URI: http://purl.org/obo/owl/ISBN#ISBN_0124561500

pseudoplasmodium
type: Synonym
has db xref: DDB_REF:5048

DDB_REF:5048
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_5048

early culminant
type: Class
has definition: Structure formed after the arrest of slug migration formed when cells of the posterior region of the slug move under the tip. Stalk tube formation is initiated at this stage.
has broad synonym: culminant
has narrow synonym: mexican hat
has broad synonym: pseudoplasmodium
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: multicellular organism
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#60

Structure formed after the arrest of slug migration formed when cells of the posterior region of the slug move under the tip. Stalk tube formation is initiated at this stage.
type: Definition
has db xref: DDB:5059
has db xref: DDB:pg
has db xref: DDB_REF:5048

DDB:5059
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_5059

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

DDB_REF:5048
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_5048

culminant
type: Synonym

mexican hat
type: Synonym

pseudoplasmodium
type: Synonym
has db xref: DDB:5048

DDB:5048
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_5048

mid culminant
type: Class
has definition: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#61
has broad synonym: culminant
has broad synonym: pseudoplasmodium
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: multicellular organism
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#67

http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#61
type: Definition
label: Structure in which stalk tube formation has progressed down the prespore zone. Basal disc formation begins at this stage, with the migration of pstA and pstB cells to the lower part of the culminant to form the basal disc.
has db xref: DDB:pg
has db xref: DDB_REF:5059

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

DDB_REF:5059
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_5059

culminant
type: Synonym

pseudoplasmodium
type: Synonym
has db xref: DDB_REF:5048

DDB_REF:5048
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_5048

late culminant
type: Class
comment: Kessin book p. 201.
has definition: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#68
has broad synonym: culminant
has related synonym: pseudoplasmodium
has OBO namespace: Dictyostelium_discoideum_anatomy
has db xref: ISBN:0521583640
subclass of: multicellular organism
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#75

http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#68
type: Definition
label: Structure in which stalk tube formation has progressed down to the basal disc. The sorogen ascents up the stalk to it apical position dring this stage. Terminal differentiation occurs at this stage: death of the stalk cells and encapsulation of the spores.
has db xref: DDB:pg
has db xref: DDB_REF:5059

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

DDB_REF:5059
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_5059

culminant
type: Synonym

pseudoplasmodium
type: Synonym
has db xref: DDB_REF:5048

DDB_REF:5048
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_5048

ISBN:0521583640
type: DbXref
has URI: http://purl.org/obo/owl/ISBN#ISBN_0521583640

fruiting body
type: Class
comment: Synonym from Kessin book p. 12-13.
has definition: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#76
has exact synonym: sorocarp
has OBO namespace: Dictyostelium_discoideum_anatomy
has db xref: ISBN:0521583640
subclass of: multicellular organism
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#82

http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#76
type: Definition
label: Dicty asexual organism which is terminally differentiated and consists of a long stalk on top of which sits the sorus that contains spores. The mature fruiting body measures between 1.5 to 3 mm in height.
has db xref: DDB:pg
has db xref: DDB_REF:5048

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

DDB_REF:5048
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_5048

sorocarp
type: Synonym
has db xref: DDB_REF:5048

DDB_REF:5048
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_5048

ISBN:0521583640
type: DbXref
has URI: http://purl.org/obo/owl/ISBN#ISBN_0521583640

stream
type: Class
has definition: Macroscopic appearance of groups of chemotactic cells orienting themselves in a head to tail fashion as they are migrating in the direction of the chemotactic stimulus to form aggregates.
has exact synonym: pseudoplasmodial stream
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: subdivision
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#88

Macroscopic appearance of groups of chemotactic cells orienting themselves in a head to tail fashion as they are migrating in the direction of the chemotactic stimulus to form aggregates.
type: Definition
has db xref: DDB:pg
has db xref: DDB_REF:5048

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

DDB_REF:5048
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_5048

pseudoplasmodial stream
type: Synonym
has db xref: DDB_REF:5048

DDB_REF:5048
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_5048

part of
type: ObjectProperty
type: TransitiveProperty
has OBO namespace: Dictyostelium_discoideum_anatomy

surface sheath of the loose aggregate
type: Class
has definition: Acellular material composed of polysaccharides and proteins, formed during late aggregation and that holds the cell mass together in the aggregate.
has related synonym: extracellular matrix (ECM)
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: surface sheath
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#93
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#94

Acellular material composed of polysaccharides and proteins, formed during late aggregation and that holds the cell mass together in the aggregate.
type: Definition
has db xref: DDB:pg
has db xref: PMID:4338436

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

PMID:4338436
type: DbXref
has URI: http://purl.org/obo/owl/PMID#PMID_4338436

extracellular matrix (ECM)
type: Synonym

surface sheath of the mound
type: Class
has definition: Acellular material composed of polysaccharides and proteins that holds the cell mass together in the mound.
has related synonym: extracellular matrix (ECM)
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: surface sheath
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#99
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#100

Acellular material composed of polysaccharides and proteins that holds the cell mass together in the mound.
type: Definition
has db xref: DDB:pg
has db xref: PMID:4338436

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

PMID:4338436
type: DbXref
has URI: http://purl.org/obo/owl/PMID#PMID_4338436

extracellular matrix (ECM)
type: Synonym

prestalk region of the tipped mound
type: Class
has definition: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#101
has related synonym: apical tip of the tipped mound
has exact synonym: pst region of the tipped mound
has OBO namespace: Dictyostelium_discoideum_anatomy
has db xref: PMID:10642783
has db xref: PMID:2513127
subclass of: prestalk region
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#107
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#108

http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#101
type: Definition
label: Elongated protusion of the tipped mound located on top of the cell mass that contains pstA cells flanked by pstO cells (expressing ecmA from the proximal and the distal part of its promoter, respectively).
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

apical tip of the tipped mound
type: Synonym

pst region of the tipped mound
type: Synonym

PMID:10642783
type: DbXref
has URI: http://purl.org/obo/owl/PMID#PMID_10642783

PMID:2513127
type: DbXref
has URI: http://purl.org/obo/owl/PMID#PMID_2513127

prespore region of the tipped mound
type: Class
has definition: Region of the tipped mound mostly composed of prespore cells. In addition to prespore cells, the prespore region contains anterior-like cells (ALC) that express ecmA and/or ecmB.
has exact synonym: psp region of the tipped mound
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: prespore region
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#112
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#113

Region of the tipped mound mostly composed of prespore cells. In addition to prespore cells, the prespore region contains anterior-like cells (ALC) that express ecmA and/or ecmB.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

psp region of the tipped mound
type: Synonym

surface sheath of the tipped mound
type: Class
has definition: Acellular material composed of polysaccharides and proteins that holds the cell mass together in the tipped mound.
has related synonym: extracellular matrix (ECM)
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: surface sheath
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#118
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#119

Acellular material composed of polysaccharides and proteins that holds the cell mass together in the tipped mound.
type: Definition
has db xref: DDB:pg
has db xref: PMID:4338436

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

PMID:4338436
type: DbXref
has URI: http://purl.org/obo/owl/PMID#PMID_4338436

extracellular matrix (ECM)
type: Synonym

prestalk region of the standing slug
type: Class
has definition: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#120
has exact synonym: pst region of the standing slug
has OBO namespace: Dictyostelium_discoideum_anatomy
has db xref: PMID:10642783
has db xref: PMID:2513127
subclass of: prestalk region
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#125
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#126

http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#120
type: Definition
label: Elongated protusion of the standing slug located on top of the cell mass that contains pstA cells flanked by pstO cells (expressing ecmA from the proximal and the distal part of its promoter, respectively).
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

pst region of the standing slug
type: Synonym

PMID:10642783
type: DbXref
has URI: http://purl.org/obo/owl/PMID#PMID_10642783

PMID:2513127
type: DbXref
has URI: http://purl.org/obo/owl/PMID#PMID_2513127

tip-organizer of the standing slug
type: Class
has definition: Part of the prestalk region of the standing slug that acts as an organizer, that is, a signalling center that directs the morphological characteristics of the entire organism.
has related synonym: tip of the standing slug
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: tip-organizer
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#130
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#131

Part of the prestalk region of the standing slug that acts as an organizer, that is, a signalling center that directs the morphological characteristics of the entire organism.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

tip of the standing slug
type: Synonym

prestalk A region of the standing slug
type: Class
comment: See p. 146 Kessin book.
has definition: Most apical region of the prestalk zone of the standing slug characterized by high expression of the ecmA gene directed by the proximal part of its promoter (ecmA promoter).
has exact synonym: pstA region of the standing slug
has OBO namespace: Dictyostelium_discoideum_anatomy
has db xref: ISBN:0521583640
subclass of: prestalk A region
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#136
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#137

Most apical region of the prestalk zone of the standing slug characterized by high expression of the ecmA gene directed by the proximal part of its promoter (ecmA promoter).
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

pstA region of the standing slug
type: Synonym

ISBN:0521583640
type: DbXref
has URI: http://purl.org/obo/owl/ISBN#ISBN_0521583640

prestalk O region of the standing slug
type: Class
comment: See p. 146 Kessin book.
has definition: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#138
has exact synonym: pstO region of the standing slug
has OBO namespace: Dictyostelium_discoideum_anatomy
has db xref: ISBN:0521583640
subclass of: prestalk O region
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#142
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#143

http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#138
type: Definition
label: Area of the prestalk zone of the standing slug located posterior to the prestalk A region and characterized by low expression of the ecmA gene directed by the distal part of its promoter (ecmO promoter).
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

pstO region of the standing slug
type: Synonym

ISBN:0521583640
type: DbXref
has URI: http://purl.org/obo/owl/ISBN#ISBN_0521583640

prestalk AB core region of the standing slug
type: Class
comment: See p. 146 Kessin book.
has definition: Cone-shaped area of the prestalk zone of the standing slug that occupies a core among the pstA region. Cells of the pstAB region express both the ecmA and ecmB genes.
has exact synonym: prestalk AB region of the standing slug
has narrow synonym: pstAB region
has OBO namespace: Dictyostelium_discoideum_anatomy
has db xref: ISBN:0521583640
subclass of: prestalk AB core region
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#149
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#150

Cone-shaped area of the prestalk zone of the standing slug that occupies a core among the pstA region. Cells of the pstAB region express both the ecmA and ecmB genes.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

prestalk AB region of the standing slug
type: Synonym

pstAB region
type: Synonym

ISBN:0521583640
type: DbXref
has URI: http://purl.org/obo/owl/ISBN#ISBN_0521583640

prespore region of the standing slug
type: Class
has definition: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#151
has exact synonym: psp region of the standing slug
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: prespore region
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#154
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#155

http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#151
type: Definition
label: Region of the standing slug mostly composed of prespore cells. In addition to prespore cells, the prespore region contains anterior-like cells (ALC) that express ecmA and/or ecmB. The prespore region occupies about three quarters of the organism.
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

psp region of the standing slug
type: Synonym

basal region of the standing slug
type: Class
has definition: Region of the standing slug in contact with the substratum and composed of prestalk B cells.
has exact synonym: base of the standing slug
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: basal region
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#159
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#160

Region of the standing slug in contact with the substratum and composed of prestalk B cells.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

base of the standing slug
type: Synonym

peripheral layer of the standing slug
type: Class
has definition: Outer-most cell layer surrounding the standing slug. The peripheral layer is composed of electron-dense cells that are connected to each other, forming a coherent tissue.
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: peripheral layer
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#164
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#165

Outer-most cell layer surrounding the standing slug. The peripheral layer is composed of electron-dense cells that are connected to each other, forming a coherent tissue.
type: Definition
has db xref: DDB:pg
has db xref: DDB_REF:1910

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

DDB_REF:1910
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_1910

surface sheath of the standing slug
type: Class
has definition: Acellular material composed of polysaccharides and proteins that holds the cell mass together in the standing slug.
has related synonym: extracellular matrix (ECM)
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: surface sheath
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#169
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#170

Acellular material composed of polysaccharides and proteins that holds the cell mass together in the standing slug.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

extracellular matrix (ECM)
type: Synonym

prestalk region of the migratory slug
type: Class
has definition: The prestalk region of the migratory slug is located at the anterior of the organism. It consists of about one quarter of the cells.
has related synonym: anterior region of the migratory slug
has exact synonym: pst region of the migratory slug
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: prestalk region
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#175
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#176

The prestalk region of the migratory slug is located at the anterior of the organism. It consists of about one quarter of the cells.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

anterior region of the migratory slug
type: Synonym

pst region of the migratory slug
type: Synonym

tip-organizer of the migratory slug
type: Class
has definition: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#177
has related synonym: tip of the migratory slug
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: tip-organizer
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#181
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#182

http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#177
type: Definition
label: Part of the prestalk region of the migratory slug that acts as an organizer, that is, a signalling center that directs the morphological characteristics of the entire organism. The tip guides the moveement of the organism during migration.
has db xref: DDB:pg
has db xref: DDB_REF:5053

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

DDB_REF:5053
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_5053

tip of the migratory slug
type: Synonym

prestalk A region of the migratory slug
type: Class
comment: Synonym from Kessin book p. 175.
has definition: Anterior-most region of the prestalk zone of the migratory slug and characterized by high expression of the ecmA gene directed by the proximal part of its promoter (ecmA promoter).
has exact synonym: prestalk AO region of the migratory slug
has exact synonym: pstA region of the migratory slug
has exact synonym: pstAO region of the migratory slug
has OBO namespace: Dictyostelium_discoideum_anatomy
has db xref: ISBN:0521583640
has db xref: PMID:10611970
subclass of: prestalk A region
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#190
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#191

Anterior-most region of the prestalk zone of the migratory slug and characterized by high expression of the ecmA gene directed by the proximal part of its promoter (ecmA promoter).
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

prestalk AO region of the migratory slug
type: Synonym

pstA region of the migratory slug
type: Synonym

pstAO region of the migratory slug
type: Synonym

ISBN:0521583640
type: DbXref
has URI: http://purl.org/obo/owl/ISBN#ISBN_0521583640

PMID:10611970
type: DbXref
has URI: http://purl.org/obo/owl/PMID#PMID_10611970

prestalk O region of the migratory slug
type: Class
comment: See p. 146 Kessin book.
has definition: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#192
has exact synonym: pstO region of the migratory slug
has OBO namespace: Dictyostelium_discoideum_anatomy
has db xref: ISBN:0521583640
subclass of: prestalk O region
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#196
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#197

http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#192
type: Definition
label: Area of the prestalk zone of the migratory slug located posterior to the prestalk A region and characterized by low expression of the ecmA gene directed by the distal part of its promoter (ecmO promoter).
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

pstO region of the migratory slug
type: Synonym

ISBN:0521583640
type: DbXref
has URI: http://purl.org/obo/owl/ISBN#ISBN_0521583640

prestalk AB core region of the migratory slug
type: Class
comment: See Kessin book p. 146.
has definition: Cone-shaped area of the prestalk zone of the migratory slug that occupies a core among the pstA region. Cells of the pstAB region express both the ecmA and ecmB genes.
has exact synonym: prestalk AB region of the migratory slug
has exact synonym: pstAB region of the migratory slug
has OBO namespace: Dictyostelium_discoideum_anatomy
has db xref: ISBN:0521583640
has db xref: PMID:8223266
subclass of: prestalk AB core region
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#204
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#205

Cone-shaped area of the prestalk zone of the migratory slug that occupies a core among the pstA region. Cells of the pstAB region express both the ecmA and ecmB genes.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

prestalk AB region of the migratory slug
type: Synonym

pstAB region of the migratory slug
type: Synonym

ISBN:0521583640
type: DbXref
has URI: http://purl.org/obo/owl/ISBN#ISBN_0521583640

PMID:8223266
type: DbXref
has URI: http://purl.org/obo/owl/PMID#PMID_8223266

prespore region of the migratory slug
type: Class
has definition: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#206
has broad synonym: psp region of the migratory slug
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: prespore region
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#209
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#210

http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#206
type: Definition
label: Region of the migratory slug composed mostly of prespore cells. In addition to prespore cells, the prespore region contains anterior-like cells (ALC) that express ecmA and/or ecmB. The prespore region occupies about three quarters of the organism.
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

psp region of the migratory slug
type: Synonym

posterior region of the migratory slug
type: Class
has definition: Region located at the very posterior of the migratory slug that contains pstB cells (rearguard cells). These cells form the basal disc in the mature fruiting body.
has broad synonym: rearguard region
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: posterior region
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#214
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#215

Region located at the very posterior of the migratory slug that contains pstB cells (rearguard cells). These cells form the basal disc in the mature fruiting body.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

rearguard region
type: Synonym

peripheral layer of the migratory slug
type: Class
has definition: Outer-most cell layer surrounding the migratory slug. The peripheral layer is composed of electron-dense cells that are connected to each other, forming a coherent tissue.
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: peripheral layer
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#219
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#220

Outer-most cell layer surrounding the migratory slug. The peripheral layer is composed of electron-dense cells that are connected to each other, forming a coherent tissue.
type: Definition
has db xref: DDB:pg
has db xref: DDB_REF:1910

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

DDB_REF:1910
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_1910

surface sheath of the migratory slug
type: Class
has definition: Acellular material composed of polysaccharides and proteins that holds the cell mass together in the migratory slug.
has related synonym: extracellular matrix (ECM)
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: surface sheath
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#225
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#226

Acellular material composed of polysaccharides and proteins that holds the cell mass together in the migratory slug.
type: Definition
has db xref: DDB:pg
has db xref: PMID:4338436

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

PMID:4338436
type: DbXref
has URI: http://purl.org/obo/owl/PMID#PMID_4338436

extracellular matrix (ECM)
type: Synonym

prestalk region of the early culminant
type: Class
has definition: The prestalk region of the early culminant is located at the most apical part of the organism. It consists of about one quarter of the cells.
has exact synonym: pst region of the early culminant
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: prestalk region
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#230
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#231

The prestalk region of the early culminant is located at the most apical part of the organism. It consists of about one quarter of the cells.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

pst region of the early culminant
type: Synonym

prestalk A region of the early culminant
type: Class
has definition: Anterior-most region of the prestalk zone of the early culminant characterized by high expression of the ecmA gene directed by the proximal part of its promoter (ecmA promoter).
has exact synonym: pstA region of the early culminant
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: prestalk A region
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#235
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#236

Anterior-most region of the prestalk zone of the early culminant characterized by high expression of the ecmA gene directed by the proximal part of its promoter (ecmA promoter).
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

pstA region of the early culminant
type: Synonym

prestalk O region of the early culminant
type: Class
has definition: Area of the prestalk zone of the early culminant located posterior to the pstA region and characterized by low expression of the ecmA gene directed by the distal part of its promoter (ecmO promoter).
has exact synonym: pstO region of the early culminant
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: prestalk O region
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#240
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#241

Area of the prestalk zone of the early culminant located posterior to the pstA region and characterized by low expression of the ecmA gene directed by the distal part of its promoter (ecmO promoter).
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

pstO region of the early culminant
type: Synonym

prestalk AB core region of the early culminant
type: Class
has definition: Cone-shaped area of the prestalk zone of the early culminant that occupies a core among the pstA region. Cells of the pstAB region express both the ecmA and ecmB genes.
has exact synonym: prestalk AB region of the early culminant
has exact synonym: pstAB region of the early culminant
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: prestalk AB core region
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#246
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#247

Cone-shaped area of the prestalk zone of the early culminant that occupies a core among the pstA region. Cells of the pstAB region express both the ecmA and ecmB genes.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

prestalk AB region of the early culminant
type: Synonym

pstAB region of the early culminant
type: Synonym

prespore region of the early culminant
type: Class
has definition: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#248
has exact synonym: psp region of the early culminant
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: prespore region
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#251
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#252

http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#248
type: Definition
label: Region of the early culminant mostly composed of prespore cells. In addition to prespore cells, the prespore region contains anterior-like cells (ALC) that express ecmA and/or ecmB. The prespore region occupies about three quarters of the organism.
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

psp region of the early culminant
type: Synonym

upper cup region of the early culminant
type: Class
has definition: Region of the prespore zone of the early culminant that borders the prestalk region. This region gives rise to the upper cup of the fruiting body.
has related synonym: prespore/anterior region of the early culminant
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: upper cup region
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#258
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#259

Region of the prespore zone of the early culminant that borders the prestalk region. This region gives rise to the upper cup of the fruiting body.
type: Definition
has db xref: DDB:pg
has db xref: PMID:1879341
has db xref: PMID:8016318

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

PMID:1879341
type: DbXref
has URI: http://purl.org/obo/owl/PMID#PMID_1879341

PMID:8016318
type: DbXref
has URI: http://purl.org/obo/owl/PMID#PMID_8016318

prespore/anterior region of the early culminant
type: Synonym

stalk tube of the early culminant
type: Class
has definition: Open, cylindrical tube of the early culminant composed of cellulose and glycoprotein and surrounded by a ring of actin in which stalk cells accumulate.
has broad synonym: sorophore sheath
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: stalk tube
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#268
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#269

Open, cylindrical tube of the early culminant composed of cellulose and glycoprotein and surrounded by a ring of actin in which stalk cells accumulate.
type: Definition
has db xref: DDB:pg
has db xref: DDB_REF:5053
has db xref: ISBN:0521583640
has db xref: PMID:11130075
has db xref: PMID:9799430

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

DDB_REF:5053
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_5053

ISBN:0521583640
type: DbXref
has URI: http://purl.org/obo/owl/ISBN#ISBN_0521583640

PMID:11130075
type: DbXref
has URI: http://purl.org/obo/owl/PMID#PMID_11130075

PMID:9799430
type: DbXref
has URI: http://purl.org/obo/owl/PMID#PMID_9799430

sorophore sheath
type: Synonym
has db xref: DDB_REF:5059

DDB_REF:5059
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_5059

basal region of the early culminant
type: Class
has definition: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#270
has exact synonym: base of the early culminant
has exact synonym: prespore/base region of the early culminant
has OBO namespace: Dictyostelium_discoideum_anatomy
has db xref: PMID:10611970
subclass of: basal region
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#275
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#276
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#277

http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#270
type: Definition
label: Region of the early culminant located at the closest to the substratum composed of rearguard cells that originated from ALC/pstB cells. This region eventually gives rise to the outer basal disc and lower cup of the fruiting body.
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

base of the early culminant
type: Synonym

prespore/base region of the early culminant
type: Synonym

PMID:10611970
type: DbXref
has URI: http://purl.org/obo/owl/PMID#PMID_10611970

peripheral layer of the early culminant
type: Class
comment: Kessin book p. 195.
has definition: Layer surrounding the Mexican hat and composed of an electron-dense cell type.
has OBO namespace: Dictyostelium_discoideum_anatomy
has db xref: ISBN:0521583640
subclass of: peripheral layer
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#282
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#283

Layer surrounding the Mexican hat and composed of an electron-dense cell type.
type: Definition
has db xref: DDB:pg
has db xref: DDB_REF:1910

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

DDB_REF:1910
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_1910

ISBN:0521583640
type: DbXref
has URI: http://purl.org/obo/owl/ISBN#ISBN_0521583640

surface sheath of the early culminant
type: Class
has definition: Acellular material composed of polysaccharides and proteins that holds the cell mass together in the early culminant.
has related synonym: extracellular matrix (ECM)
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: surface sheath
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#288
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#289
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#290

Acellular material composed of polysaccharides and proteins that holds the cell mass together in the early culminant.
type: Definition
has db xref: DDB:pg
has db xref: PMID:4338436

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

PMID:4338436
type: DbXref
has URI: http://purl.org/obo/owl/PMID#PMID_4338436

extracellular matrix (ECM)
type: Synonym

prestalk region of the mid culminant
type: Class
has definition: The prestalk region of the mid culminant is located at the most apical part of the organism. It consists of about one quarter of the cells.
has exact synonym: pst region of the mid culminant
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: prestalk region
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#294
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#295

The prestalk region of the mid culminant is located at the most apical part of the organism. It consists of about one quarter of the cells.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

pst region of the mid culminant
type: Synonym

prestalk A region of the mid culminant
type: Class
has definition: Anterior-most region of the prestalk zone of the mid culminant characterized by high expression of the ecmA gene directed by the proximal part of its promoter (ecmA promoter).
has exact synonym: pstA region of the mid culminant
has OBO namespace: Dictyostelium_discoideum_anatomy
has db xref: PMID:2513127
subclass of: prestalk A region
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#300
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#301

Anterior-most region of the prestalk zone of the mid culminant characterized by high expression of the ecmA gene directed by the proximal part of its promoter (ecmA promoter).
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

pstA region of the mid culminant
type: Synonym

PMID:2513127
type: DbXref
has URI: http://purl.org/obo/owl/PMID#PMID_2513127

prestalk O region of the mid culminant
type: Class
has definition: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#302
has exact synonym: pstO region of the mid culminant
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: prestalk O region
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#305
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#306

http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#302
type: Definition
label: Area of the prestalk zone of the mid culminant located posterior to the prestalk A region and characterized by low expression of the ecmA gene directed by the distal part of its promoter (ecmO promoter).
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

pstO region of the mid culminant
type: Synonym

prestalk AB core region of the mid culminant
type: Class
has definition: Cone-shaped area of the prestalk zone of the mid culminant that occupies a core among the pstA region. Cells of the pstAB region express both the ecmA and ecmB genes.
has exact synonym: prestalk AB region of the mid culminant
has exact synonym: pstAB region of the mid culminant
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: prestalk AB core region
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#311
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#312

Cone-shaped area of the prestalk zone of the mid culminant that occupies a core among the pstA region. Cells of the pstAB region express both the ecmA and ecmB genes.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

prestalk AB region of the mid culminant
type: Synonym

pstAB region of the mid culminant
type: Synonym

stalk of the mid culminant
type: Class
comment: Synonym from Kessin book p. 12-13; Kessin book p. 193.
has definition: Tubular structure of the mid culminant that consists of cellulose-covered cells stacked on top of each other and surrounded by an acellular stalk tube composed of cellulose and glycoprotein.
has exact synonym: sorophore of the mid culminant
has OBO namespace: Dictyostelium_discoideum_anatomy
has db xref: ISBN:0521583640
subclass of: stalk
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#318
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#319

Tubular structure of the mid culminant that consists of cellulose-covered cells stacked on top of each other and surrounded by an acellular stalk tube composed of cellulose and glycoprotein.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

sorophore of the mid culminant
type: Synonym
has db xref: DDB_REF:5053

DDB_REF:5053
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_5053

ISBN:0521583640
type: DbXref
has URI: http://purl.org/obo/owl/ISBN#ISBN_0521583640

stalk tube of the mid culminant
type: Class
has definition: Open, cylindrical tube of the mid culminant composed of cellulose and glycoprotein and surrounded by a ring of actin in which stalk cells accumulate.
has broad synonym: sorophore sheath
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: stalk tube
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#327
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#328

Open, cylindrical tube of the mid culminant composed of cellulose and glycoprotein and surrounded by a ring of actin in which stalk cells accumulate.
type: Definition
has db xref: DDB:pg
has db xref: ISBN:0521583640
has db xref: PMID:11130075
has db xref: PMID:9799430

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

ISBN:0521583640
type: DbXref
has URI: http://purl.org/obo/owl/ISBN#ISBN_0521583640

PMID:11130075
type: DbXref
has URI: http://purl.org/obo/owl/PMID#PMID_11130075

PMID:9799430
type: DbXref
has URI: http://purl.org/obo/owl/PMID#PMID_9799430

sorophore sheath
type: Synonym
has db xref: DDB_REF:5059

DDB_REF:5059
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_5059

prespore region of the mid culminant
type: Class
has definition: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#329
has broad synonym: psp region of the mid culminant
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: prespore region
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#332
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#333

http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#329
type: Definition
label: Region of the mid culminant mostly composed of prespore cells. In addition to prespore cells, the prespore region contains anterior-like cells (ALC) that express ecmA and/or ecmB. The prespore region occupies about three quarters of the organism.
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

psp region of the mid culminant
type: Synonym

upper cup region of the mid culminant
type: Class
has definition: Region of the prespore zone of the mid culminant that borders the prestalk region.
has related synonym: prespore/anterior region of the mid culminant
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: upper cup region
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#338
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#339

Region of the prespore zone of the mid culminant that borders the prestalk region.
type: Definition
has db xref: DDB:pg
has db xref: PMID:8016318

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

PMID:8016318
type: DbXref
has URI: http://purl.org/obo/owl/PMID#PMID_8016318

prespore/anterior region of the mid culminant
type: Synonym

lower cup region of the mid culminant
type: Class
has definition: Region of the prespore zone of the mid culminant located just above the base and that is the precursor of the lower cup.
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: lower cup region
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#342
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#343

Region of the prespore zone of the mid culminant located just above the base and that is the precursor of the lower cup.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

basal disc of the mid culminant
type: Class
has definition: Region located of the mid culminant located closest to the substratum and composed of pst cells (rearguard cells).
has OBO namespace: Dictyostelium_discoideum_anatomy
has db xref: PMID:10611970
subclass of: basal disc
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#348
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#349

Region located of the mid culminant located closest to the substratum and composed of pst cells (rearguard cells).
type: Definition
has db xref: DDB:pg
has db xref: DDB_REF:5053

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

DDB_REF:5053
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_5053

PMID:10611970
type: DbXref
has URI: http://purl.org/obo/owl/PMID#PMID_10611970

peripheral layer of the mid culminant
type: Class
comment: Kessin book p. 195.
has definition: Layer surrounding the mid culminant and composed of an electron-dense cell type.
has OBO namespace: Dictyostelium_discoideum_anatomy
has db xref: ISBN:0521583640
subclass of: peripheral layer
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#354
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#355

Layer surrounding the mid culminant and composed of an electron-dense cell type.
type: Definition
has db xref: DDB:pg
has db xref: DDB_REF:1910

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

DDB_REF:1910
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_1910

ISBN:0521583640
type: DbXref
has URI: http://purl.org/obo/owl/ISBN#ISBN_0521583640

stalk of the late culminant
type: Class
comment: Synonym from Kessin book p. 12-13, Kessin book p. 193.
has definition: Tubular structure of the late culminant that consists of cellulose-covered cells stacked on top of each other and surrounded by an acellular stalk tube composed of cellulose and glycoprotein.
has exact synonym: sorophore of the late culminant
has OBO namespace: Dictyostelium_discoideum_anatomy
has db xref: ISBN:0521583640
subclass of: stalk
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#361
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#362

Tubular structure of the late culminant that consists of cellulose-covered cells stacked on top of each other and surrounded by an acellular stalk tube composed of cellulose and glycoprotein.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

sorophore of the late culminant
type: Synonym
has db xref: DDB_REF:5053

DDB_REF:5053
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_5053

ISBN:0521583640
type: DbXref
has URI: http://purl.org/obo/owl/ISBN#ISBN_0521583640

stalk tube of the late culminant
type: Class
has definition: Open, cylindrical tube of the late culminant composed of cellulose and glycoprotein and surrounded by a ring of actin in which stalk cells accumulate.
has broad synonym: sorophore sheath
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: stalk tube
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#370
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#371

Open, cylindrical tube of the late culminant composed of cellulose and glycoprotein and surrounded by a ring of actin in which stalk cells accumulate.
type: Definition
has db xref: DDB:pg
has db xref: ISBN:0521583640
has db xref: PMID:11130075
has db xref: PMID:9799430

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

ISBN:0521583640
type: DbXref
has URI: http://purl.org/obo/owl/ISBN#ISBN_0521583640

PMID:11130075
type: DbXref
has URI: http://purl.org/obo/owl/PMID#PMID_11130075

PMID:9799430
type: DbXref
has URI: http://purl.org/obo/owl/PMID#PMID_9799430

sorophore sheath
type: Synonym
has db xref: DDB_REF:5059

DDB_REF:5059
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_5059

sorus of the late culminant
type: Class
has definition: Ovoid structure of the late culminant supported by the stalk and that contains the spores.
has exact synonym: spore head of the late culminant
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: sorus
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#376
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#377

Ovoid structure of the late culminant supported by the stalk and that contains the spores.
type: Definition
has db xref: DDB:pg
has db xref: ISBN:0198529171

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

ISBN:0198529171
type: DbXref
has URI: http://purl.org/obo/owl/ISBN#ISBN_0198529171

spore head of the late culminant
type: Synonym

apical disc of the late culminant
type: Class
comment: Kessin book p. 193.
has definition: Most apical structure of the late culminant. Composed of cells that express the prestalk markers ecmA, ecmB and staB.
has OBO namespace: Dictyostelium_discoideum_anatomy
has db xref: ISBN:0521583640
subclass of: apical disc
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#382

Most apical structure of the late culminant. Composed of cells that express the prestalk markers ecmA, ecmB and staB.
type: Definition
has db xref: DDB:pg
has db xref: PMID:9203345

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

PMID:9203345
type: DbXref
has URI: http://purl.org/obo/owl/PMID#PMID_9203345

ISBN:0521583640
type: DbXref
has URI: http://purl.org/obo/owl/ISBN#ISBN_0521583640

upper cup of the late culminant
type: Class
has definition: Region of the late culminant located above the spore mass and composed of anterior-like cells.
has OBO namespace: Dictyostelium_discoideum_anatomy
has db xref: PMID:1879341
subclass of: upper cup
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#388
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#389

Region of the late culminant located above the spore mass and composed of anterior-like cells.
type: Definition
has db xref: DDB:pg
has db xref: PMID:1879341
has db xref: PMID:7128927

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

PMID:1879341
type: DbXref
has URI: http://purl.org/obo/owl/PMID#PMID_1879341

PMID:7128927
type: DbXref
has URI: http://purl.org/obo/owl/PMID#PMID_7128927

PMID:1879341
type: DbXref
has URI: http://purl.org/obo/owl/PMID#PMID_1879341

lower cup of the late culminant
type: Class
has definition: Region of the sorus of the late culminant located at the base of the sorus and composed of anterior-like cells.
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: lower cup
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#394
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#395

Region of the sorus of the late culminant located at the base of the sorus and composed of anterior-like cells.
type: Definition
has db xref: DDB:pg
has db xref: PMID:1879341
has db xref: PMID:7128927

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

PMID:1879341
type: DbXref
has URI: http://purl.org/obo/owl/PMID#PMID_1879341

PMID:7128927
type: DbXref
has URI: http://purl.org/obo/owl/PMID#PMID_7128927

basal disc of the late culminant
type: Class
has definition: Conical-shaped structure of the late culminant that anchors the stalk to the substratum. Composed of anterior-like cells.
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: basal disc
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#399
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#400

Conical-shaped structure of the late culminant that anchors the stalk to the substratum. Composed of anterior-like cells.
type: Definition
has db xref: DDB:pg
has db xref: DDB_REF:5053

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

DDB_REF:5053
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_5053

inner basal disc of the late culminant
type: Class
has definition: Central portion of the basal disc of the late culminant. Composed of stalk cells.
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: inner basal disc
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#403
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#404

Central portion of the basal disc of the late culminant. Composed of stalk cells.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

outer basal disc of the late culminant
type: Class
has definition: Ring of cells at the periphery of the basal disc of the late culminant. Composed of pstB cells (rearguard cells) and other anterior-like cells.
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: outer basal disc
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#407
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#408

Ring of cells at the periphery of the basal disc of the late culminant. Composed of pstB cells (rearguard cells) and other anterior-like cells.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

stalk of the fruiting body
type: Class
has definition: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#409
has exact synonym: sorophore of the fruiting body
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: stalk
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#415
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#416

http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#409
type: Definition
label: Tubular structure of the fruiting body that consists of cellulose-covered cells stacked on top of each other and surrounded by an acellular stalk tube composed of cellulose and glycoprotein. The stalk of the mature fruiting body is usually 5-15 microns in diameter and between 1.5 to 3 cm in height.
has db xref: DDB:pg
has db xref: DDB_REF:5048
has db xref: PMID:565220

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

DDB_REF:5048
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_5048

PMID:565220
type: DbXref
has URI: http://purl.org/obo/owl/PMID#PMID_565220

sorophore of the fruiting body
type: Synonym
has db xref: DDB_REF:5053

DDB_REF:5053
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_5053

stalk tube of the fruiting body
type: Class
has definition: Open, cylindrical tube of the fruiting body composed of cellulose and glycoprotein and surrounded by a ring of actin in which stalk cells accumulate.
has broad synonym: sorophore sheath
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: stalk tube
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#423
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#424

Open, cylindrical tube of the fruiting body composed of cellulose and glycoprotein and surrounded by a ring of actin in which stalk cells accumulate.
type: Definition
has db xref: DDB:pg
has db xref: DDB_REF:5059
has db xref: PMID:11130075

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

DDB_REF:5059
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_5059

PMID:11130075
type: DbXref
has URI: http://purl.org/obo/owl/PMID#PMID_11130075

sorophore sheath
type: Synonym
has db xref: DDB_REF:5059

DDB_REF:5059
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_5059

sorus of the fruiting body
type: Class
has definition: Structure of the fruiting body supported by the stalk and that contains the spores. The sorus is 125-300 microns in diameter, lemon-shaped, and grayish white to pale yellow in color.
has exact synonym: spore head of the fruiting body
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: sorus
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#429
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#430

Structure of the fruiting body supported by the stalk and that contains the spores. The sorus is 125-300 microns in diameter, lemon-shaped, and grayish white to pale yellow in color.
type: Definition
has db xref: DDB:pg
has db xref: DDB_REF:5048

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

DDB_REF:5048
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_5048

spore head of the fruiting body
type: Synonym

apical disc of the fruiting body
type: Class
has definition: Region of the fruiting body located above the spore mass and composed of anterior-like cells.
has related synonym: upper cup of the fruiting body
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: apical disc
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#436
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#437

Region of the fruiting body located above the spore mass and composed of anterior-like cells.
type: Definition
has db xref: DDB:pg
has db xref: PMID:1879341
has db xref: PMID:7128927

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

PMID:1879341
type: DbXref
has URI: http://purl.org/obo/owl/PMID#PMID_1879341

PMID:7128927
type: DbXref
has URI: http://purl.org/obo/owl/PMID#PMID_7128927

upper cup of the fruiting body
type: Synonym

lower cup of the fruiting body
type: Class
has definition: Region of the fruiting body located at the base of the sorus and composed of anterior-like cells.
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: lower cup
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#443
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#444

Region of the fruiting body located at the base of the sorus and composed of anterior-like cells.
type: Definition
has db xref: DDB:pg
has db xref: PMID:1879341
has db xref: PMID:7128927
has db xref: PMID:8631253

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

PMID:1879341
type: DbXref
has URI: http://purl.org/obo/owl/PMID#PMID_1879341

PMID:7128927
type: DbXref
has URI: http://purl.org/obo/owl/PMID#PMID_7128927

PMID:8631253
type: DbXref
has URI: http://purl.org/obo/owl/PMID#PMID_8631253

basal disc of the fruiting body
type: Class
has definition: Conical-shaped structure of the fruiting body that anchors the stalk to the substratum, around 150 to 400 microns in diameter. Composed of anterior-like cells.
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: basal disc
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#448
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#449

Conical-shaped structure of the fruiting body that anchors the stalk to the substratum, around 150 to 400 microns in diameter. Composed of anterior-like cells.
type: Definition
has db xref: DDB:pg
has db xref: DDB_REF:5048

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

DDB_REF:5048
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_5048

inner basal disc of the fruiting body
type: Class
has definition: Central portion of the basal disc of the fruiting body composed of stalk cells.
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: inner basal disc
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#452
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#453

Central portion of the basal disc of the fruiting body composed of stalk cells.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

outer basal disc of the fruiting body
type: Class
has definition: Ring of cells at the periphery of the basal disc of the fruiting body composed of pstB cells (rearguard cells) and other anterior-like cells.
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: outer basal disc
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#456
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#457

Ring of cells at the periphery of the basal disc of the fruiting body composed of pstB cells (rearguard cells) and other anterior-like cells.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

slime trail
type: Class
has definition: Acellular material from the surface sheath left behind the migratory slug as it moves. Can be up to 2-3 cm in length.
has exact synonym: slime track
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: acellular anatomical structure
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#463
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#464

Acellular material from the surface sheath left behind the migratory slug as it moves. Can be up to 2-3 cm in length.
type: Definition
has db xref: DDB:pg
has db xref: DDB_REF:5048

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

DDB_REF:5048
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_5048

slime track
type: Synonym
has db xref: DDB_REF:5059

DDB_REF:5059
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_5059

surface sheath of the mid culminant
type: Class
has definition: Acellular material composed of polysaccharides and proteins. Covers the basal disc of the mid culminant.
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: surface sheath
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#468
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#469

Acellular material composed of polysaccharides and proteins. Covers the basal disc of the mid culminant.
type: Definition
has db xref: DDB:pg
has db xref: DDB_REF:5059

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

DDB_REF:5059
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_5059

surface sheath of the late culminant
type: Class
has definition: Acellular material composed of polysaccharides and proteins. In the late culminant, covers only the basal disc.
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: surface sheath
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#473
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#474

Acellular material composed of polysaccharides and proteins. In the late culminant, covers only the basal disc.
type: Definition
has db xref: DDB:pg
has db xref: DDB_REF:5059

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

DDB_REF:5059
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_5059

surface sheath of the fruiting body
type: Class
has definition: Acellular material composed of polysaccharides and proteins. In the fruiting body, covers only the basal disc.
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: surface sheath
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#478
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#479

Acellular material composed of polysaccharides and proteins. In the fruiting body, covers only the basal disc.
type: Definition
has db xref: DDB:pg
has db xref: DDB_REF:5059

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

DDB_REF:5059
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_5059

tip-organizer of the tipped mound
type: Class
has definition: Part of the prestalk region of the tipped mound that acts as an organizer, that is, a signalling center that directs the morphological characteristics of the entire organism.
has related synonym: tip of the tipped mound
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: tip-organizer
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#483
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#484

Part of the prestalk region of the tipped mound that acts as an organizer, that is, a signalling center that directs the morphological characteristics of the entire organism.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

tip of the tipped mound
type: Synonym

single cell organism
type: Class
has definition: Cell that is an individual member of the species Dictyostelium discoideum.
has exact synonym: Dictyostelium discoideum single cell organism
has OBO namespace: Dictyostelium_discoideum_anatomy
has db xref: CARO:0000064
subclass of: cell

Cell that is an individual member of the species Dictyostelium discoideum.
type: Definition
has db xref: CARO:MAH
has db xref: DDB:PG

CARO:MAH
type: DbXref
has URI: http://purl.org/obo/owl/CARO#CARO_MAH

DDB:PG
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_PG

Dictyostelium discoideum single cell organism
type: Synonym

CARO:0000064
type: DbXref
has URI: http://purl.org/obo/owl/CARO#CARO_0000064

macrocyst
type: Class
has definition: Unicellular diplopid organism resulting from the fusion of two cells of opposite mating types.
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: single cell organism
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#493

Unicellular diplopid organism resulting from the fusion of two cells of opposite mating types.
type: Definition
has db xref: DDB:pg
has db xref: DDB_REF:398

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

DDB_REF:398
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_398

prespore region
type: Class
has definition: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#494
has exact synonym: psp region
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: subdivision

http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#494
type: Definition
label: Region mostly composed of prespore cells. In addition to prespore cells, the prespore region contains anterior-like cells (ALC) that express ecmA and/or ecmB. The prespore region occupies about three quarters of the organism.
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

psp region
type: Synonym

prestalk region
type: Class
has definition: The prestalk region is located at the most apical part of the organism. It consists of about one quarter of the cells.
has exact synonym: pst region
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: subdivision

The prestalk region is located at the most apical part of the organism. It consists of about one quarter of the cells.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

pst region
type: Synonym

prestalk A region
type: Class
has definition: Anterior-most region of the prestalk zone characterized by high expression of the ecmA gene directed by the proximal part of its promoter (ecmA promoter).
has exact synonym: pstA region
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: subdivision
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#503

Anterior-most region of the prestalk zone characterized by high expression of the ecmA gene directed by the proximal part of its promoter (ecmA promoter).
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

pstA region
type: Synonym

basal disc
type: Class
has definition: Conical-shaped structure that anchors the stalk to the substratum. Composed of anterior-like cells.
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: subdivision

Conical-shaped structure that anchors the stalk to the substratum. Composed of anterior-like cells.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

peripheral layer
type: Class
has definition: Layer surrounding the pseudoplasmodium and composed of an electron-dense cell type.
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: subdivision

Layer surrounding the pseudoplasmodium and composed of an electron-dense cell type.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

prestalk AB core region
type: Class
has definition: Cone-shaped area of the prestalk zone that occupies a core among the pstA region. Cells of the pstAB region express both the ecmA and ecmB genes.
has exact synonym: prestalk AB region
has exact synonym: pstAB region
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: subdivision
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#512

Cone-shaped area of the prestalk zone that occupies a core among the pstA region. Cells of the pstAB region express both the ecmA and ecmB genes.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

prestalk AB region
type: Synonym

pstAB region
type: Synonym

prestalk O region
type: Class
has definition: Area of the prestalk zone located posterior to the pstA region and characterized by low expression of the ecmA gene directed by the distal part of its promoter (ecmO promoter).
has exact synonym: pstO region
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: subdivision
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#516

Area of the prestalk zone located posterior to the pstA region and characterized by low expression of the ecmA gene directed by the distal part of its promoter (ecmO promoter).
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

pstO region
type: Synonym

stalk
type: Class
has definition: Tubular structure that consists of cellulose-covered cells stacked on top of each other and surrounded by an acellular stalk tube composed of cellulose and glycoprotein.
has exact synonym: sorophore
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: subdivision

Tubular structure that consists of cellulose-covered cells stacked on top of each other and surrounded by an acellular stalk tube composed of cellulose and glycoprotein.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

sorophore
type: Synonym

sorus
type: Class
has definition: Ovoid structure supported by the stalk and that contains the spores.
has exact synonym: spore head
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: subdivision

Ovoid structure supported by the stalk and that contains the spores.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

spore head
type: Synonym

peripheral layer cell
type: Class
has definition: Electron-dense cell connected to neighboring peripheral layer cells thus forming a coherent tissue around the multicellular organism.
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: cell
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#526
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#527
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#528
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#529
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#530

Electron-dense cell connected to neighboring peripheral layer cells thus forming a coherent tissue around the multicellular organism.
type: Definition
has db xref: DDB:pg
has db xref: DDB_REF:1910

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

DDB_REF:1910
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_1910

surface sheath
type: Class
has definition: Acellular material composed of polysaccharides and proteins, formed during late aggregation and that holds the cell mass together throuhout development.
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: acellular anatomical structure

Acellular material composed of polysaccharides and proteins, formed during late aggregation and that holds the cell mass together throuhout development.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

stalk tube
type: Class
has definition: Open, cylindrical tube that appears during culmination. The stalk tube is composed of cellulose and glycoprotein and surrounded by a ring of actin in which stalk cells accumulate.
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: acellular anatomical structure

Open, cylindrical tube that appears during culmination. The stalk tube is composed of cellulose and glycoprotein and surrounded by a ring of actin in which stalk cells accumulate.
type: Definition
has db xref: DDB:pg
has db xref: DDB_REF:5053
has db xref: ISBN:0521583640
has db xref: PMID:11130075
has db xref: PMID:9799430

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

DDB_REF:5053
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_5053

ISBN:0521583640
type: DbXref
has URI: http://purl.org/obo/owl/ISBN#ISBN_0521583640

PMID:11130075
type: DbXref
has URI: http://purl.org/obo/owl/PMID#PMID_11130075

PMID:9799430
type: DbXref
has URI: http://purl.org/obo/owl/PMID#PMID_9799430

inner basal disc
type: Class
has definition: Central portion of the basal disc. Composed of stalk cells.
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: subdivision
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#541

Central portion of the basal disc. Composed of stalk cells.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

outer basal disc
type: Class
has definition: Ring of cells at the periphery of the basal disc composed of pstB cells (rearguard cells) and other anterior-like cells.
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: subdivision
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#544

Ring of cells at the periphery of the basal disc composed of pstB cells (rearguard cells) and other anterior-like cells.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

prestalk A region of the tipped mound
type: Class
has definition: Anterior-most region of the prestalk zone of the tipped mound characterized by high expression of the ecmA gene directed by the proximal part of its promoter (ecmA promoter).
has exact synonym: pstA region of the tipped mound
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: prestalk A region
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#548

Anterior-most region of the prestalk zone of the tipped mound characterized by high expression of the ecmA gene directed by the proximal part of its promoter (ecmA promoter).
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

pstA region of the tipped mound
type: Synonym

prestalk AB core region of the tipped mound
type: Class
has definition: Cone-shaped area of the prestalk zone of the tipped mound that occupies a core among the pstA region. Cells of the pstAB region express both the ecmA and ecmB genes.
has exact synonym: prestalk AB region of the tipped mound
has narrow synonym: pstAB region
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: prestalk AB core region
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#553

Cone-shaped area of the prestalk zone of the tipped mound that occupies a core among the pstA region. Cells of the pstAB region express both the ecmA and ecmB genes.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

prestalk AB region of the tipped mound
type: Synonym

pstAB region
type: Synonym

prestalk O region of the tipped mound
type: Class
has definition: Area of the prestalk zone of the tipped mound located posterior to the pstA region and characterized by low expression of the ecmA gene directed by the distal part of its promoter (ecmO promoter).
has exact synonym: pstO region of the tipped mound
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: prestalk O region
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#557

Area of the prestalk zone of the tipped mound located posterior to the pstA region and characterized by low expression of the ecmA gene directed by the distal part of its promoter (ecmO promoter).
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

pstO region of the tipped mound
type: Synonym

tip-organizer
type: Class
has definition: Part of the prestalk region that acts as an organizer, that is, a signalling center that directs the morphological characteristics of the entire organism.
has related synonym: tip
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: subdivision
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#561

Part of the prestalk region that acts as an organizer, that is, a signalling center that directs the morphological characteristics of the entire organism.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

tip
type: Synonym

tip-organizer of the early culminant
type: Class
has definition: Part of the prestalk region of the early culminant that acts as an organizer, that is, a signalling center that directs the morphological characteristics of the entire organism.
has related synonym: tip of the early culminant
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: tip-organizer
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#565
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#566
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#567

Part of the prestalk region of the early culminant that acts as an organizer, that is, a signalling center that directs the morphological characteristics of the entire organism.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

tip of the early culminant
type: Synonym

lower cup
type: Class
has definition: Region located at the base of the sorus and composed of anterior-like cells.
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: subdivision
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#570

Region located at the base of the sorus and composed of anterior-like cells.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

apical disc
type: Class
has definition: Most apical structure of the organism.
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: subdivision
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#573

Most apical structure of the organism.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

upper cup
type: Class
has definition: Region located above the spore mass and composed of upper cup cells, derived from ALC/pstB cells.
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: subdivision
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#576

Region located above the spore mass and composed of upper cup cells, derived from ALC/pstB cells.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

posterior region
type: Class
has definition: Region located at the very posterior of the organism that contains pstB cells (rearguard cells). These cells form the basal disc in the mature fruiting body.
has exact synonym: rearguard region
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: subdivision

Region located at the very posterior of the organism that contains pstB cells (rearguard cells). These cells form the basal disc in the mature fruiting body.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

rearguard region
type: Synonym

apex of the mound
type: Class
has definition: Apical region of the mound where cAMP signals originate that trigger positive chemotaxis from pstA and pstO cells.
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: apex
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#582

Apical region of the mound where cAMP signals originate that trigger positive chemotaxis from pstA and pstO cells.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

basal region
type: Class
has definition: Region of the early pseudoplasmodium located at the closest to the substratum composed of pstB cells.
has exact synonym: base
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: subdivision

Region of the early pseudoplasmodium located at the closest to the substratum composed of pstB cells.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

base
type: Synonym

apex
type: Class
has definition: Apical region of the early plasmodium where cAMP signals originate that trigger positive chemotaxis from pstA and pstO cells.
has related synonym: tip
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: subdivision

Apical region of the early plasmodium where cAMP signals originate that trigger positive chemotaxis from pstA and pstO cells.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

tip
type: Synonym

upper cup cell
type: Class
has definition: Cell forming the upper cup. These cells arise from ALC/pstB cells that have migrated upwards from the prespore region.
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: anterior like cell
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#591
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#592
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#593
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#594

Cell forming the upper cup. These cells arise from ALC/pstB cells that have migrated upwards from the prespore region.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

lower cup region of the early culminant
type: Class
has definition: Region of the prespore zone of the early culminant that borders the base and that is the precursor of the lower cup.
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: lower cup region
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#597

Region of the prespore zone of the early culminant that borders the base and that is the precursor of the lower cup.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

lower cup region
type: Class
has definition: Region of the prespore zone located just above the base and that is the precursor of the lower cup.
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: subdivision

Region of the prespore zone located just above the base and that is the precursor of the lower cup.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

tip-organiser cell
type: Class
has definition: Type of pstA cell that composes the very tip of the organism.
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: prestalk cell
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#602
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#603
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#604
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#605

Type of pstA cell that composes the very tip of the organism.
type: Definition
has db xref: DDB:jgw

DDB:jgw
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_jgw

ALC/pstA cell
type: Class
has definition: Anterior like cell that expresses the ecmA marker from a promoter region that is proximal to the ATG (ecmAO promoter).
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: anterior like cell

Anterior like cell that expresses the ecmA marker from a promoter region that is proximal to the ATG (ecmAO promoter).
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

ALC/pstB cell
type: Class
has definition: Anterior like cell that expresses the ecmB gene. Some ALC/pstB cells become rearguard cells, while others become upper cup and lower cup cells.
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: anterior like cell

Anterior like cell that expresses the ecmB gene. Some ALC/pstB cells become rearguard cells, while others become upper cup and lower cup cells.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

lower cup cell
type: Class
has definition: Cell forming the lower cup. These cells arise from ALC/pstB cells that have migrated downwards from the prespore region.
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: anterior like cell
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#612
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#613
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#614
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#615
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#616

Cell forming the lower cup. These cells arise from ALC/pstB cells that have migrated downwards from the prespore region.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

apical disc cell
type: Class
has definition: Cell forming the apical disc formed of upper cup cells that remain at the top of the fruiting body once the stalk formation is complete.
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: cell
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#619
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#620
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#621

Cell forming the apical disc formed of upper cup cells that remain at the top of the fruiting body once the stalk formation is complete.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

upper cup region
type: Class
has definition: Region located above the prespore mass and composed of a population of ALC/pstB cells.
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: subdivision
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#624

Region located above the prespore mass and composed of a population of ALC/pstB cells.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

giant cell
type: Class
has definition: Large cell resulting from the fusion of two or more ameobae druing the sexual cycle of Dictyostelium discoideum. The giant cell eventually differentiates into a macrocyst.
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: single cell organism

Large cell resulting from the fusion of two or more ameobae druing the sexual cycle of Dictyostelium discoideum. The giant cell eventually differentiates into a macrocyst.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

cell
type: Class
has definition: Anatomical structure that has as its parts a maximally connected cell compartment surrounded by a plasma membrane.
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: Dictyostelium discoideum anatomical structure

Anatomical structure that has as its parts a maximally connected cell compartment surrounded by a plasma membrane.
type: Definition
has db xref: CARO:MAH

CARO:MAH
type: DbXref
has URI: http://purl.org/obo/owl/CARO#CARO_MAH

chemotactic amoeboid cell
type: Class
has definition: Starved cell that secretes and responds to chemoattractants (cAMP).
has broad synonym: amoebae
has exact synonym: chemotactic amoeboid cell (sensu Mycetozoa)
has OBO namespace: Dictyostelium_discoideum_anatomy
has db xref: CL:0000289
subclass of: single cell organism
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#637
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#638

Starved cell that secretes and responds to chemoattractants (cAMP).
type: Definition
has db xref: DDB:pg
has db xref: DDB_REF:5048
has db xref: PMID:4338436

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

DDB_REF:5048
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_5048

PMID:4338436
type: DbXref
has URI: http://purl.org/obo/owl/PMID#PMID_4338436

amoebae
type: Synonym

chemotactic amoeboid cell (sensu Mycetozoa)
type: Synonym
has db xref: CL:0000289

CL:0000289
type: DbXref
has URI: http://purl.org/obo/owl/CL#CL_0000289

CL:0000289
type: DbXref
has URI: http://purl.org/obo/owl/CL#CL_0000289

aggregate cell
type: Class
has definition: Differentiating cell composing the aggregate that has acquired adhesive properties.
has OBO namespace: Dictyostelium_discoideum_anatomy
has db xref: CL:0000259
subclass of: cell
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#642
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#643
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#644
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#645

Differentiating cell composing the aggregate that has acquired adhesive properties.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

CL:0000259
type: DbXref
has URI: http://purl.org/obo/owl/CL#CL_0000259

anterior like cell
type: Class
has definition: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#646
has exact synonym: ALC
has OBO namespace: Dictyostelium_discoideum_anatomy
has db xref: CL:0000265
subclass of: cell
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#650
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#651

http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#646
type: Definition
label: Cell that has properties of anterior cells (for e.g., accumulate vital dyes in autophagic vesicles) but that is are scattered throughout the rear of the slug. Some but not all these cells express the ecmA gene and/or the ecmB gene. ALCs maintain an amoeboid appearance during culmination. ALCs that express the ecmO promoter have been called pstO/ALC.
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

ALC
type: Synonym

CL:0000265
type: DbXref
has URI: http://purl.org/obo/owl/CL#CL_0000265

prespore cell
type: Class
has definition: Cell that is undergoing differentiation to become a spore. Characterized by the presence of prespore vesicles (PV).
has exact synonym: psp cell
has OBO namespace: Dictyostelium_discoideum_anatomy
has db xref: CL:0000267
subclass of: cell
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#658
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#659
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#660
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#661
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#662
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#663
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#664
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#665

Cell that is undergoing differentiation to become a spore. Characterized by the presence of prespore vesicles (PV).
type: Definition
has db xref: DDB:pg
has db xref: DDB_REF:439
has db xref: PMID:4330277

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

DDB_REF:439
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_439

PMID:4330277
type: DbXref
has URI: http://purl.org/obo/owl/PMID#PMID_4330277

psp cell
type: Synonym

CL:0000267
type: DbXref
has URI: http://purl.org/obo/owl/CL#CL_0000267

prestalk cell
type: Class
has definition: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#666
has exact synonym: anterior cell
has exact synonym: pst cell
has OBO namespace: Dictyostelium_discoideum_anatomy
has db xref: CL:0000269
subclass of: cell
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#673

http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#666
type: Definition
label: Cell that is undergoing differentiation to become a stalk cell and characterized by the ability to update vital dyes. Represents about one-quarter of the cells. During development, prestalk cells are located in the anterior portion of the organism.
has db xref: DDB:pg
has db xref: DDB_REF:448
has db xref: DDB_REF:5059

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

DDB_REF:448
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_448

DDB_REF:5059
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_5059

anterior cell
type: Synonym

pst cell
type: Synonym

CL:0000269
type: DbXref
has URI: http://purl.org/obo/owl/CL#CL_0000269

pstO cell
type: Class
has definition: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#674
has related synonym: prestalk O cell
has OBO namespace: Dictyostelium_discoideum_anatomy
has db xref: CL:0000279
subclass of: prestalk cell
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#678
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#679
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#680
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#681
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#682
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#683
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#684
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#685

http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#674
type: Definition
label: Cell that is undergoing differentiation to become a stalk cell. PstO cells express ecmA at a very low level and are located at the posterior half of the prestalk zone. Expresses ecmA from the distal region of its promoter (ecmO).
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

prestalk O cell
type: Synonym

CL:0000279
type: DbXref
has URI: http://purl.org/obo/owl/CL#CL_0000279

pstA cell
type: Class
has definition: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#686
has exact synonym: prestalk A cell
has exact synonym: pstAO cell
has OBO namespace: Dictyostelium_discoideum_anatomy
has db xref: CL:0000271
subclass of: prestalk cell
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#691
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#692
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#693
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#694
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#695
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#696
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#697
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#698

http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#686
type: Definition
label: Cell that is undergoing differentiation to become a stalk cell. PstA cells express the ecmA marker from a promoter region that is proximal to the ATG (ecmAO promoter). They are located at the anterior-most region of the slug. During culmination pstA cells differentiate into pstAB cells.
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

prestalk A cell
type: Synonym

pstAO cell
type: Synonym

CL:0000271
type: DbXref
has URI: http://purl.org/obo/owl/CL#CL_0000271

rearguard cell
type: Class
has definition: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#699
has related synonym: prestalk B cell
has related synonym: pstB cell
has OBO namespace: Dictyostelium_discoideum_anatomy
has db xref: CL:0000275
subclass of: anterior like cell
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#705
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#706
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#707
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#708
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#709
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#710
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#711

http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#699
type: Definition
label: Cell expressing ecmB but not ecmA. Rearguard cells are located at the very rear of the slug (rearguard region). These cells form the outer basal disc of the fruiting body. If a migratory slug is formed, these cells are left behind.
has db xref: DDB:pg
has db xref: PMID:8631253

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

PMID:8631253
type: DbXref
has URI: http://purl.org/obo/owl/PMID#PMID_8631253

prestalk B cell
type: Synonym

pstB cell
type: Synonym

CL:0000275
type: DbXref
has URI: http://purl.org/obo/owl/CL#CL_0000275

pstAB cell
type: Class
has definition: Cell that is undergoing differentiation to become a stalk cell. PstAB cells express both ecmA and ecmB either simultaneously or sequentially. During culmination pstA differentiate into pstAB cells.
has exact synonym: prestalk AB cell
has OBO namespace: Dictyostelium_discoideum_anatomy
has db xref: CL:0000273
subclass of: prestalk cell
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#716
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#717
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#718
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#719
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#720
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#721
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#722

Cell that is undergoing differentiation to become a stalk cell. PstAB cells express both ecmA and ecmB either simultaneously or sequentially. During culmination pstA differentiate into pstAB cells.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

prestalk AB cell
type: Synonym

CL:0000273
type: DbXref
has URI: http://purl.org/obo/owl/CL#CL_0000273

ALC/pstAB
type: Class
has definition: Anterior-like cell expressing both ecmA and ecmB.
has exact synonym: prestalk AB/anterior like cell
has OBO namespace: Dictyostelium_discoideum_anatomy
has db xref: CL:0000281
subclass of: anterior like cell

Anterior-like cell expressing both ecmA and ecmB.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

prestalk AB/anterior like cell
type: Synonym

CL:0000281
type: DbXref
has URI: http://purl.org/obo/owl/CL#CL_0000281

ALC/pstO
type: Class
has definition: Anterior-like cell that expresses ecmA from the ecmO promoter and that can move to the position normally occupied by the pstO cells.
has OBO namespace: Dictyostelium_discoideum_anatomy
has db xref: CL:0000283
subclass of: anterior like cell

Anterior-like cell that expresses ecmA from the ecmO promoter and that can move to the position normally occupied by the pstO cells.
type: Definition
has db xref: DDB:pg
has db xref: PMID:8205618

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

PMID:8205618
type: DbXref
has URI: http://purl.org/obo/owl/PMID#PMID_8205618

CL:0000283
type: DbXref
has URI: http://purl.org/obo/owl/CL#CL_0000283

stalk cell
type: Class
has definition: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#731
has OBO namespace: Dictyostelium_discoideum_anatomy
has db xref: CL:0000285
subclass of: cell
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#735
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#736
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#737
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#738
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#739
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#740

http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#731
type: Definition
label: Cell of polyhedric shape filling the stalk tube. Stack cells are large (around 8 icrons in diameter), highly vacuolated, and are surrounded by cell wall composed of cellulose. Stalk cells die upon terminal differentiation. Their role is to provide structural support for the fruiting body.
has db xref: DDB:pg
has db xref: DDB_REF:5059

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

DDB_REF:5059
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_5059

CL:0000285
type: DbXref
has URI: http://purl.org/obo/owl/CL#CL_0000285

spore
type: Class
has definition: Dormant cell protected by a tri-layer spore coat. The spore has an elliptical shape and is approximately 6-9 microns by 3 microns.
has exact synonym: spore (sensu Mycetozoa)
has OBO namespace: Dictyostelium_discoideum_anatomy
has db xref: CL:0000291
subclass of: single cell organism
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#748
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#749

Dormant cell protected by a tri-layer spore coat. The spore has an elliptical shape and is approximately 6-9 microns by 3 microns.
type: Definition
has db xref: DDB:pg
has db xref: DDB_REF:5048
has db xref: PMID:4338436

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

DDB_REF:5048
type: DbXref
has URI: http://purl.org/obo/owl/DDB_REF#DDB_REF_5048

PMID:4338436
type: DbXref
has URI: http://purl.org/obo/owl/PMID#PMID_4338436

spore (sensu Mycetozoa)
type: Synonym
has db xref: CL:0000291

CL:0000291
type: DbXref
has URI: http://purl.org/obo/owl/CL#CL_0000291

CL:0000291
type: DbXref
has URI: http://purl.org/obo/owl/CL#CL_0000291

aspidocyte
type: Class
has definition: Cell type formed in the presence of toxins. The membrane of the aspidocyte is highly resistant to detergents.
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: single cell organism
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#753

Cell type formed in the presence of toxins. The membrane of the aspidocyte is highly resistant to detergents.
type: Definition
has db xref: DDB:pg
has db xref: PMID:17259634

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

PMID:17259634
type: DbXref
has URI: http://purl.org/obo/owl/PMID#PMID_17259634

pstB cell
type: Class
has definition: Cell that is undergoing differentiation to become a stalk cell. PstB cells express the ecmB marker and form the outer basal disc in the fruiting body.
has exact synonym: prestalk B cell
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: prestalk cell
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#759
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#760

Cell that is undergoing differentiation to become a stalk cell. PstB cells express the ecmB marker and form the outer basal disc in the fruiting body.
type: Definition
has db xref: DDB:pg
has db xref: PMID:8631253
has db xref: PMID:8631254

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

PMID:8631253
type: DbXref
has URI: http://purl.org/obo/owl/PMID#PMID_8631253

PMID:8631254
type: DbXref
has URI: http://purl.org/obo/owl/PMID#PMID_8631254

prestalk B cell
type: Synonym

sentinel cell
type: Class
has definition: Cell present in multicellular organism that has a high ability to engulf bacteria and toxin and is presumed to have a detoxification and immune-like role.
has exact synonym: S cell
has OBO namespace: Dictyostelium_discoideum_anatomy
subclass of: cell
subclass of: http://lodlaundromat.org/.well-known/genid/e4168df9440efe66cf3cbffde5a8c997#764

Cell present in multicellular organism that has a high ability to engulf bacteria and toxin and is presumed to have a detoxification and immune-like role.
type: Definition
has db xref: PMID:17673666

PMID:17673666
type: DbXref
has URI: http://purl.org/obo/owl/PMID#PMID_17673666

S cell
type: Synonym

pstI cell
type: Class
has definition: Initial population of prestalk cells that activate the ecmA promoter at the mound stage and that presumably further differentiate into pstA and pstO cells.
has exact synonym: prestalk I cell
has OBO namespace: Dictyostelium_discoideum_anatomy
has db xref: CL:0000277
subclass of: ObsoleteClass

Initial population of prestalk cells that activate the ecmA promoter at the mound stage and that presumably further differentiate into pstA and pstO cells.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

prestalk I cell
type: Synonym

CL:0000277
type: DbXref
has URI: http://purl.org/obo/owl/CL#CL_0000277

Dictyostelium discoideum anatomical structure
type: Class
has definition: Material anatomical entity that has inherent 3D shape and is generated by coordinated expression of the Dictyostelium discoideum genome.
has OBO namespace: Dictyostelium_discoideum_anatomy

Material anatomical entity that has inherent 3D shape and is generated by coordinated expression of the Dictyostelium discoideum genome.
type: Definition
has db xref: CARO:MAH

CARO:MAH
type: DbXref
has URI: http://purl.org/obo/owl/CARO#CARO_MAH

acellular anatomical structure
type: Class
has definition: Anatomical structure that consists of cell parts and cell substances and together does not constitute a cell or a tissue.
has OBO namespace: Dictyostelium_discoideum_anatomy
has db xref: CARO:0000040
subclass of: Dictyostelium discoideum anatomical structure

Anatomical structure that consists of cell parts and cell substances and together does not constitute a cell or a tissue.
type: Definition
has db xref: CARO:MAH

CARO:MAH
type: DbXref
has URI: http://purl.org/obo/owl/CARO#CARO_MAH

CARO:0000040
type: DbXref
has URI: http://purl.org/obo/owl/CARO#CARO_0000040

multicellular organism
type: Class
has definition: Anatomical structure that is an individual member of the Dictyostelium discoideum species and consists of more than one cell.
has OBO namespace: Dictyostelium_discoideum_anatomy
has db xref: CARO:0000012
subclass of: Dictyostelium discoideum anatomical structure

Anatomical structure that is an individual member of the Dictyostelium discoideum species and consists of more than one cell.
type: Definition
has db xref: CARO:MAH

CARO:MAH
type: DbXref
has URI: http://purl.org/obo/owl/CARO#CARO_MAH

CARO:0000012
type: DbXref
has URI: http://purl.org/obo/owl/CARO#CARO_0000012

subdivision
type: Class
has definition: Anatomical structure which is a primary subdivision of whole Dictyostelium organism. The mereological sum of these is the whole organism.
has OBO namespace: Dictyostelium_discoideum_anatomy
has db xref: CARO:0000032
subclass of: Dictyostelium discoideum anatomical structure

Anatomical structure which is a primary subdivision of whole Dictyostelium organism. The mereological sum of these is the whole organism.
type: Definition
has db xref: DDB:pg

DDB:pg
type: DbXref
has URI: http://purl.org/obo/owl/DDB#DDB_pg

CARO:0000032
type: DbXref
has URI: http://purl.org/obo/owl/CARO#CARO_0000032