BIRNLex-OBI-proxy
type: Ontology
subject: The BIRN project lexicon
creator: The BIRN Ontology Task Force
created date: 2007-10-05
modified date: 2008-02-21
version info: 1.3.1
default language: en
editorial note: next ID: birnlex_11049
editorial note: ID use: 11000 - 11048
contributor: Jeff Grethe
contributor: Maryann Martone
contributor: Carol Bean
contributor: Christine Fennema-Notestine
contributor: Bill Bug
contributor: Amarnath Gupta
contributor: David Kennedy
contributor: Jessica Turner
editorial note: Using birnlex IDs starting with 11000.
change note: 2008-02-21 (BB): Updated the sham control role classes.
definition: The BIRN Project lexicon uses this file as a temporary proxy for classes from the Ontology of Biomedical Investigation (OBI). These classes will be replaced by their OBI equivalents, once there is an official release built off BFO v1.1 that can be successfully classified using Pellet v1.5.0 in Protege.

Mock surgery
type: Class
subclass of: Sham treatment
created date: 2008-02-21
modified date: 2008-02-21
synonym: Sham surgery
editorial note: This is a proxy class to be replaced by its OBI equivalent, once there is an official release built off BFO v1.1 that can be successfully classified using Pellet v1.5.0 in Protege.
external source URI: http://obi.sourceforge.net/ontology/OBI.owl#Mock_surgery
has curation status: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#graph_position_temporary
has birnlex curator: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#Bill_Bug

Sham treatment
type: Class
has birnlex curator: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#Bill_Bug
birnlex definition: A subject group treatment identical to the experimental treatment but without the active agent under study.
external source URI: http://obi.sourceforge.net/ontology/OBI.owl#Sham_treatment
subclass of: Reference treatment
created date: 2008-02-21
modified date: 2008-02-21
editorial note: This is a proxy class to be replaced by its OBI equivalent, once there is an official release built off BFO v1.1 that can be successfully classified using Pellet v1.5.0 in Protege.
has curation status: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#graph_position_temporary

Investigator
type: Class
subclass of: Investigation administration role
has curation status: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#graph_position_temporary
editorial note: This is a proxy class to be replaced by its OBI equivalent, once there is an official release built off BFO v1.1 that can be successfully classified using Pellet v1.5.0 in Protege.
external source URI: http://obi.sourceforge.net/ontology/OBI.owl#OBI_288
created date: 2007-10-05
has birnlex curator: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#Bill_Bug
modified date: 2007-10-05

Investigation administration role
type: Class
subclass of: Role
external source URI: http://obi.sourceforge.net/ontology/OBI.owl#OBI_176
has birnlex curator: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#Bill_Bug
has curation status: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#graph_position_temporary
editorial note: This is a proxy class to be replaced by its OBI equivalent, once there is an official release built off BFO v1.1 that can be successfully classified using Pellet v1.5.0 in Protege.
modified date: 2007-10-05
created date: 2007-10-05

Detector role
type: Class
created date: 2007-10-05
has curation status: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#graph_position_temporary
modified date: 2007-10-05
editorial note: This is a proxy class to be replaced by its OBI equivalent, once there is an official release built off BFO v1.1 that can be successfully classified using Pellet v1.5.0 in Protege.
external source URI: http://obi.sourceforge.net/ontology/OBI.owl#OBI_323
has birnlex curator: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#Bill_Bug
subclass of: Reagent role

Reagent role
type: Class
modified date: 2007-10-05
nif ID: _1_3.2
created date: 2007-10-05
has birnlex curator: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#Bill_Bug
subclass of: Role
external source URI: http://obi.sourceforge.net/ontology/OBI.owl#OBI_328
has curation status: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#graph_position_temporary
editorial note: This is a proxy class to be replaced by its OBI equivalent, once there is an official release built off BFO v1.1 that can be successfully classified using Pellet v1.5.0 in Protege.

Artefact object
type: Class
has curation status: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#graph_position_temporary
has birnlex curator: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#Bill_Bug
modified date: 2007-10-05
subclass of: Object
editorial note: This is a proxy class to be replaced by its OBI equivalent, once there is an official release built off BFO v1.1 that can be successfully classified using Pellet v1.5.0 in Protege.
external source URI: http://obi.sourceforge.net/ontology/OBI.owl#OBI_47
created date: 2007-10-05

Data object
type: Class
has curation status: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#graph_position_temporary
modified date: 2007-10-05
editorial note: This is a proxy class to be replaced by its OBI equivalent, once there is an official release built off BFO v1.1 that can be successfully classified using Pellet v1.5.0 in Protege.
subclass of: Information content entity
created date: 2007-10-05
external source URI: http://obi.sourceforge.net/ontology/OBI.owl#OBI_305
has birnlex curator: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#Bill_Bug

Information content entity
type: Class
external source URI: http://obi.sourceforge.net/ontology/OBI.owl#OBI_342
has curation status: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#graph_position_temporary
has birnlex curator: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#Bill_Bug
editorial note: This is a proxy class to be replaced by its OBI equivalent, once there is an official release built off BFO v1.1 that can be successfully classified using Pellet v1.5.0 in Protege.
modified date: 2007-10-05
created date: 2007-10-05
subclass of: Non-realizable information entity

Entity of organismal origin
type: Class
created date: 2007-10-05
has birnlex curator: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#Bill_Bug
subclass of: birnlex 5
modified date: 2007-10-05
external source URI: http://obi.sourceforge.net/ontology/OBI.owl#OBI_133
nif ID: _1_3.5
has curation status: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#graph_position_temporary
editorial note: This is a proxy class to be replaced by its OBI equivalent, once there is an official release built off BFO v1.1 that can be successfully classified using Pellet v1.5.0 in Protege.

Material transformation
type: Class
has curation status: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#graph_position_temporary
external source URI: http://obi.sourceforge.net/ontology/OBI.owl#OBI_94
modified date: 2007-10-05
subclass of: Protocol application
editorial note: This is a proxy class to be replaced by its OBI equivalent, once there is an official release built off BFO v1.1 that can be successfully classified using Pellet v1.5.0 in Protege.
has birnlex curator: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#Bill_Bug
created date: 2007-10-05

Protocol application
type: Class
external source URI: http://obi.sourceforge.net/ontology/OBI.owl#OBI_69
created date: 2007-10-05
has curation status: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#graph_position_temporary
has birnlex curator: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#Bill_Bug
subclass of: Planned process
editorial note: This is a proxy class to be replaced by its OBI equivalent, once there is an official release built off BFO v1.1 that can be successfully classified using Pellet v1.5.0 in Protege.
modified date: 2007-10-05

Clinical finding
type: Class
has birnlex curator: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#Bill_Bug
subclass of: Narrative object
editorial note: This is a proxy class to be replaced by its OBI equivalent, once there is an official release built off BFO v1.1 that can be successfully classified using Pellet v1.5.0 in Protege.
modified date: 2007-10-05
has curation status: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#graph_position_temporary
created date: 2007-10-05
nif ID: _7_12.1
external source URI: http://obi.sourceforge.net/ontology/OBI.owl#OBI_286

Narrative object
type: Class
external source URI: http://obi.sourceforge.net/ontology/OBI.owl#OBI_300
has birnlex curator: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#Bill_Bug
has curation status: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#graph_position_temporary
modified date: 2007-10-05
editorial note: This is a proxy class to be replaced by its OBI equivalent, once there is an official release built off BFO v1.1 that can be successfully classified using Pellet v1.5.0 in Protege.
subclass of: Information content entity
nif ID: _7_12
created date: 2007-10-05

Investigation record
type: Class
external source URI: http://obi.sourceforge.net/ontology/OBI.owl#OBI_46
has curation status: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#graph_position_temporary
subclass of: Report
modified date: 2007-10-05
editorial note: This is a proxy class to be replaced by its OBI equivalent, once there is an official release built off BFO v1.1 that can be successfully classified using Pellet v1.5.0 in Protege.
has birnlex curator: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#Bill_Bug
created date: 2007-10-05

Report
type: Class
editorial note: This is a proxy class to be replaced by its OBI equivalent, once there is an official release built off BFO v1.1 that can be successfully classified using Pellet v1.5.0 in Protege.
nif ID: _7_12
has birnlex curator: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#Bill_Bug
has curation status: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#graph_position_temporary
subclass of: Narrative object
modified date: 2007-10-05
created date: 2007-10-05
external source URI: http://obi.sourceforge.net/ontology/OBI.owl#OBI_322

Planned process
type: Class
has birnlex curator: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#Bill_Bug
subclass of: Process
has curation status: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#graph_position_temporary
created date: 2007-10-05
modified date: 2007-10-05
external source URI: http://obi.sourceforge.net/ontology/OBI.owl#OBI_600062
editorial note: This is a proxy class to be replaced by its OBI equivalent, once there is an official release built off BFO v1.1 that can be successfully classified using Pellet v1.5.0 in Protege.

Disease
type: Class
created date: 2007-10-05
has birnlex curator: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#Bill_Bug
external source URI: http://obi.sourceforge.net/ontology/OBI.owl#OBI_155
has curation status: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#graph_position_temporary
subclass of: Disposition
editorial note: This is a proxy class to be replaced by its OBI equivalent, once there is an official release built off BFO v1.1 that can be successfully classified using Pellet v1.5.0 in Protege.
modified date: 2007-10-05
nif ID: _8.3

Reference
type: Class
subclass of: Role
has curation status: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#graph_position_temporary
external source URI: http://obi.sourceforge.net/ontology/OBI.owl#Reference
has birnlex curator: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#Bill_Bug
modified date: 2008-02-21
editorial note: This is a proxy class to be replaced by its OBI equivalent, once there is an official release built off BFO v1.1 that can be successfully classified using Pellet v1.5.0 in Protege.
created date: 2008-02-21

Quantitative value
type: Class
external source URI: http://obi.sourceforge.net/ontology/OBI.owl#OBI_147
subclass of: Value
has birnlex curator: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#Bill_Bug
has curation status: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#graph_position_temporary
editorial note: This is a proxy class to be replaced by its OBI equivalent, once there is an official release built off BFO v1.1 that can be successfully classified using Pellet v1.5.0 in Protege.
modified date: 2007-10-05
created date: 2007-10-05

Value
type: Class
created date: 2007-10-05
has birnlex curator: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#Bill_Bug
external source URI: http://obi.sourceforge.net/ontology/OBI.owl#OBI_18
modified date: 2007-10-05
subclass of: Data object
has curation status: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#graph_position_temporary
editorial note: This is a proxy class to be replaced by its OBI equivalent, once there is an official release built off BFO v1.1 that can be successfully classified using Pellet v1.5.0 in Protege.

Journal article
type: Class
created date: 2007-10-05
has birnlex curator: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#Bill_Bug
has curation status: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#graph_position_temporary
external source URI: http://obi.sourceforge.net/ontology/OBI.owl#OBI_275
editorial note: This is a proxy class to be replaced by its OBI equivalent, once there is an official release built off BFO v1.1 that can be successfully classified using Pellet v1.5.0 in Protege.
modified date: 2007-10-05
subclass of: Narrative object

Non-realizable information entity
type: Class
subclass of: GenericallyDependentContinuant
editorial note: This is a proxy class to be replaced by its OBI equivalent, once there is an official release built off BFO v1.1 that can be successfully classified using Pellet v1.5.0 in Protege.
modified date: 2007-10-05
created date: 2007-10-05
external source URI: http://obi.sourceforge.net/ontology/OBI.owl#OBI_295
has curation status: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#graph_position_temporary
has birnlex curator: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#Bill_Bug

Comment
type: Class
modified date: 2007-10-10
nif ID: _4_6.3
has curation status: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#graph_position_temporary
subclass of: Narrative object
editorial note: This is a proxy class to be replaced by its OBI equivalent, once there is an official release built off BFO v1.1 that can be successfully classified using Pellet v1.5.0 in Protege.
synonym: Note
nif ID: _7_12
has birnlex curator: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#Bill_Bug
created date: 2007-10-10

Vehicle control treatment
type: Class
has curation status: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#graph_position_temporary
has birnlex curator: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#Bill_Bug
subclass of: Sham treatment
created date: 2008-02-21
modified date: 2008-02-21
external source URI: http://obi.sourceforge.net/ontology/OBI.owl#Vehicle_control_treatment
editorial note: This is a proxy class to be replaced by its OBI equivalent, once there is an official release built off BFO v1.1 that can be successfully classified using Pellet v1.5.0 in Protege.

Imaging assay
type: Class
has curation status: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#graph_position_temporary
modified date: 2007-10-05
subclass of: Assay
external source URI: http://obi.sourceforge.net/ontology/OBI.owl#OBI_185
editorial note: This is a proxy class to be replaced by its OBI equivalent, once there is an official release built off BFO v1.1 that can be successfully classified using Pellet v1.5.0 in Protege.
created date: 2007-10-05
has birnlex curator: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#Bill_Bug

Assay
type: Class
editorial note: This is a proxy class to be replaced by its OBI equivalent, once there is an official release built off BFO v1.1 that can be successfully classified using Pellet v1.5.0 in Protege.
modified date: 2007-10-05
created date: 2007-10-05
has birnlex curator: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#Bill_Bug
has curation status: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#graph_position_temporary
external source URI: http://obi.sourceforge.net/ontology/OBI.owl#OBI_70
subclass of: Protocol application

Cardinal part of instrument
type: Class
has curation status: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#graph_position_temporary
editorial note: This is a proxy class to be replaced by its OBI equivalent, once there is an official release built off BFO v1.1 that can be successfully classified using Pellet v1.5.0 in Protege.
created date: 2007-10-05
has birnlex curator: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#Bill_Bug
modified date: 2007-10-05
external source URI: http://obi.sourceforge.net/ontology/OBI.owl#OBI_36
subclass of: Artefact object

Digital entity
type: Class
external source URI: http://obi.sourceforge.net/ontology/OBI.owl#OBI_306
has birnlex curator: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#Bill_Bug
subclass of: GenericallyDependentContinuant
created date: 2007-10-05
has curation status: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#graph_position_temporary
modified date: 2007-10-05
editorial note: This is a proxy class to be replaced by its OBI equivalent, once there is an official release built off BFO v1.1 that can be successfully classified using Pellet v1.5.0 in Protege.

Role in protocol application
type: Class
editorial note: This is a proxy class to be replaced by its OBI equivalent, once there is an official release built off BFO v1.1 that can be successfully classified using Pellet v1.5.0 in Protege.
modified date: 2008-02-21
created date: 2007-10-05
external source URI: http://obi.sourceforge.net/ontology/OBI.owl#OBI_343
subclass of: Role
has birnlex curator: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#Bill_Bug
has curation status: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#graph_position_temporary

Reporter role
type: Class
editorial note: This is a proxy class to be replaced by its OBI equivalent, once there is an official release built off BFO v1.1 that can be successfully classified using Pellet v1.5.0 in Protege.
external source URI: http://obi.sourceforge.net/ontology/OBI.owl#OBI_289
has birnlex curator: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#Bill_Bug
modified date: 2007-10-05
subclass of: Reagent role
has curation status: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#graph_position_temporary
created date: 2007-10-05

Cell line
type: Class
nif ID: _1_3.3
has birnlex curator: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#Bill_Bug
external source URI: http://obi.sourceforge.net/ontology/OBI.owl#OBI_129
subclass of: Entity of organismal origin
created date: 2007-10-05
has curation status: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#graph_position_temporary
modified date: 2007-10-05
editorial note: This is a proxy class to be replaced by its OBI equivalent, once there is an official release built off BFO v1.1 that can be successfully classified using Pellet v1.5.0 in Protege.

Liquid chromatography mass spectrometry platform
type: Class
has curation status: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#graph_position_temporary
subclass of: Platform
editorial note: This is a proxy class to be replaced by its OBI equivalent, once there is an official release built off BFO v1.1 that can be successfully classified using Pellet v1.5.0 in Protege.
created date: 2007-10-05
has birnlex curator: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#Bill_Bug
modified date: 2007-10-05
external source URI: http://obi.sourceforge.net/ontology/OBI.owl#OBI_51

Platform
type: Class
editorial note: This is a proxy class to be replaced by its OBI equivalent, once there is an official release built off BFO v1.1 that can be successfully classified using Pellet v1.5.0 in Protege.
created date: 2007-10-05
has birnlex curator: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#Bill_Bug
external source URI: http://obi.sourceforge.net/ontology/OBI.owl#OBI_50
modified date: 2007-10-05
subclass of: ObjectAggregate
has curation status: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#graph_position_temporary

Image
type: Class
external source URI: http://obi.sourceforge.net/ontology/OBI.owl#OBI_325
has curation status: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#graph_position_temporary
subclass of: Data object
editorial note: This is a proxy class to be replaced by its OBI equivalent, once there is an official release built off BFO v1.1 that can be successfully classified using Pellet v1.5.0 in Protege.
created date: 2007-10-05
has birnlex curator: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#Bill_Bug
modified date: 2007-10-05

Negative control role
type: Class
has birnlex curator: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#Bill_Bug
created date: 2007-10-05
subclass of: birnlex retired class
has curation status: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#graph_position_temporary
is replaced by class: http://purl.org/nbirn/birnlex/ontology/BIRNLex-OBI-proxy.owl#birnlex_11045
editorial note: This is a proxy class to be replaced by its OBI equivalent, once there is an official release built off BFO v1.1 that can be successfully classified using Pellet v1.5.0 in Protege.
external source URI: http://obi.sourceforge.net/ontology/OBI.owl#OBI_173
modified date: 2008-02-21
has former parent class: http://purl.org/nbirn/birnlex/ontology/BIRNLex-OBI-proxy.owl#birnlex_11017

Algorithm
type: Class
created date: 2007-10-05
has birnlex curator: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#Bill_Bug
subclass of: Information entity
has curation status: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#graph_position_temporary
editorial note: This is a proxy class to be replaced by its OBI equivalent, once there is an official release built off BFO v1.1 that can be successfully classified using Pellet v1.5.0 in Protege.
modified date: 2007-10-05
external source URI: http://obi.sourceforge.net/ontology/OBI.owl#OBI_270

Information entity
type: Class
external source URI: http://obi.sourceforge.net/ontology/OBI.owl#OBI_344
editorial note: This is a proxy class to be replaced by its OBI equivalent, once there is an official release built off BFO v1.1 that can be successfully classified using Pellet v1.5.0 in Protege.
modified date: 2007-10-05
subclass of: GenericallyDependentContinuant
created date: 2007-10-05
has birnlex curator: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#Bill_Bug
has curation status: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#graph_position_temporary

Microarray platform
type: Class
has curation status: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#graph_position_temporary
has birnlex curator: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#Bill_Bug
modified date: 2007-10-05
nif ID: _7_5.1
subclass of: Platform
editorial note: This is a proxy class to be replaced by its OBI equivalent, once there is an official release built off BFO v1.1 that can be successfully classified using Pellet v1.5.0 in Protege.
created date: 2007-10-05
external source URI: http://obi.sourceforge.net/ontology/OBI.owl#OBI_52

Reference treatment
type: Class
external source URI: http://obi.sourceforge.net/ontology/OBI.owl#Reference_treatment
created date: 2008-02-21
subclass of: Reference
modified date: 2008-02-21
editorial note: This is a proxy class to be replaced by its OBI equivalent, once there is an official release built off BFO v1.1 that can be successfully classified using Pellet v1.5.0 in Protege.
has birnlex curator: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#Bill_Bug
has curation status: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#graph_position_temporary

Binary executable
type: Class
subclass of: Digital entity
synonym: software program
synonym: software resource
created date: 2007-10-05
has curation status: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#graph_position_temporary
external source URI: http://obi.sourceforge.net/ontology/OBI.owl#OBI_351
has birnlex curator: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#Bill_Bug
editorial note: This is a proxy class to be replaced by its OBI equivalent, once there is an official release built off BFO v1.1 that can be successfully classified using Pellet v1.5.0 in Protege.
nif ID: _1_2
synonym: program
modified date: 2007-10-05

Data transformation
type: Class
subclass of: Protocol application
modified date: 2007-10-05
editorial note: This is a proxy class to be replaced by its OBI equivalent, once there is an official release built off BFO v1.1 that can be successfully classified using Pellet v1.5.0 in Protege.
has birnlex curator: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#Bill_Bug
external source URI: http://obi.sourceforge.net/ontology/OBI.owl#OBI_95
created date: 2007-10-05
has curation status: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#graph_position_temporary

Device
type: Class
has birnlex curator: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#Bill_Bug
external source URI: http://obi.sourceforge.net/ontology/OBI.owl#OBI_400002
editorial note: This is a proxy class to be replaced by its OBI equivalent, once there is an official release built off BFO v1.1 that can be successfully classified using Pellet v1.5.0 in Protege.
modified date: 2007-10-05
subclass of: Artefact object
created date: 2007-10-05
has curation status: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#graph_position_temporary

Data set
type: Class
external source URI: http://obi.sourceforge.net/ontology/OBI.owl#OBI_43
created date: 2007-10-05
has curation status: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#graph_position_temporary
modified date: 2007-10-05
editorial note: This is a proxy class to be replaced by its OBI equivalent, once there is an official release built off BFO v1.1 that can be successfully classified using Pellet v1.5.0 in Protege.
subclass of: Data object
has birnlex curator: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#Bill_Bug

Placebo treatment
type: Class
subclass of: Sham treatment
has birnlex curator: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#Bill_Bug
modified date: 2008-02-21
editorial note: This is a proxy class to be replaced by its OBI equivalent, once there is an official release built off BFO v1.1 that can be successfully classified using Pellet v1.5.0 in Protege.
created date: 2008-02-21
has curation status: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#graph_position_temporary
external source URI: http://obi.sourceforge.net/ontology/OBI.owl#Placebo_treatment

Protocol
type: Class
has birnlex curator: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#Bill_Bug
subclass of: Information entity
editorial note: This is a proxy class to be replaced by its OBI equivalent, once there is an official release built off BFO v1.1 that can be successfully classified using Pellet v1.5.0 in Protege.
modified date: 2007-10-05
created date: 2007-10-05
has curation status: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#graph_position_temporary
external source URI: http://obi.sourceforge.net/ontology/OBI.owl#OBI_272

Instrument
type: Class
subclass of: Device
nif ID: _1_3.1
editorial note: This is a proxy class to be replaced by its OBI equivalent, once there is an official release built off BFO v1.1 that can be successfully classified using Pellet v1.5.0 in Protege.
modified date: 2007-10-05
created date: 2007-10-05
has birnlex curator: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#Bill_Bug
external source URI: http://obi.sourceforge.net/ontology/OBI.owl#OBI_400003
has curation status: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#graph_position_temporary

Investigation design
type: Class
has birnlex curator: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#Bill_Bug
subclass of: Information entity
created date: 2007-10-05
has curation status: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#graph_position_temporary
modified date: 2007-10-05
editorial note: This is a proxy class to be replaced by its OBI equivalent, once there is an official release built off BFO v1.1 that can be successfully classified using Pellet v1.5.0 in Protege.
external source URI: http://obi.sourceforge.net/ontology/OBI.owl#OBI_335

Control role
type: Class
created date: 2007-10-05
has birnlex curator: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#Bill_Bug
has former parent class: http://purl.org/nbirn/birnlex/ontology/BIRNLex-OBI-proxy.owl#birnlex_11016
external source URI: http://obi.sourceforge.net/ontology/OBI.owl#OBI_171
is replaced by class: http://purl.org/nbirn/birnlex/ontology/BIRNLex-OBI-proxy.owl#birnlex_11044
subclass of: birnlex retired class
has curation status: http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#graph_position_temporary
editorial note: This is a proxy class to be replaced by its OBI equivalent, once there is an official release built off BFO v1.1 that can be successfully classified using Pellet v1.5.0 in Protege.
modified date: 2008-02-21