plant_environment_ontology
type: Ontology
has date: 09:01:2009 13:22
saved by: Pankaj Jaiswal
has default namespace: plant_environment_ontology
comment: This is an OWL translation of an ontology whose native representational form is .obo. The translation was performed using the oboInOwl xslt library. For details, see http://www.berkeleybop.org/obo-conv.cgi

UV-B light regimen
type: Class
has definition: The treatment using UV-B light either exclusively or as part of a supplemental electromagnetic radiation in the wavelength range of 315-280nm.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: UV light regimen

UV-A light regimen
type: Class
has definition: The treatment using UV-A light either exclusively or as part of a supplemental electromagnetic radiation in the wavelength range of 380-315nm.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: UV light regimen

temperate region
type: Class
has definition: Exposure to the regions with a temperate climate, which are usually characterized by having roughly equally long winters and summers.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: ecological environment

loam content
type: Class
has OBO namespace: plant_environment_ontology
subclass of: soil texture

Viridiplantae
type: Class
has definition: Definition
  label: Suggests the exposure of plant to other plants found in its growth environment. These plants may be growing as a weed or as part of normal farming practices. This treatmnet is part of an assay of any direct or indirect, harmful or beneficial effect of one plant on another through the production of chemical compounds (allelochemicals) that escape in the environment.
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: Virdiplantae:33090
    type: DbXref
    has URI: http://purl.org/obo/owl/Virdiplantae#Virdiplantae_33090
has related synonym: green plant
has OBO namespace: plant_environment_ontology
subclass of: pest/pathogen/animal/plant environment

monocot mixed crop neighbor
type: Class
has definition: OBSOLETE.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: ObsoleteClass

monocot weed plant neighbor
type: Class
has definition: OBSOLETE.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: ObsoleteClass

Monochoria vaginalis
type: Class
has definition: The exposure of reference/experimental plant to monocot plant Monochoria vaginalis, found in its growth environment. This plant may be growing as a weed or as part of normal farming practices.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:44972
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_44972
has related synonym: Asian pickerel weed
has related synonym: heartshape false pickerelweed
has OBO namespace: plant_environment_ontology
subclass of: Liliopsida

Eudicotyledon
type: Class
has definition: The exposure of reference/experimental plant to dicot plants found in its growth environment. These plants may be growing as a weed or as part of normal farming practices.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:71240
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_71240
has related synonym: Eudicot
has related synonym: dicot
has OBO namespace: plant_environment_ontology
subclass of: Viridiplantae

Sagittaria montevidensis
type: Class
has definition: The exposure of reference/experimental plant to monocot plant Sagittaria montevidensis, found in its growth environment. This plant may be growing as a weed or as part of normal farming practices.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:118780
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_118780
has related synonym: giant arrowhead
has OBO namespace: plant_environment_ontology
subclass of: Sagittaria spp.

Sagittaria longiloba
type: Class
has definition: The exposure of reference/experimental plant to monocot plant Sagittaria longiloba, found in its growth environment. This plant may be growing as a weed or as part of normal farming practices.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: Flecha de Agua
has related synonym: longlobe arrowhead
has related synonym: narrow-leaf arrowhead
has OBO namespace: plant_environment_ontology
subclass of: Sagittaria spp.

Heteranthera limosa
type: Class
has definition: The exposure of reference/experimental plant to monocot plant Heteranthera limosa, found in its growth environment. This plant may be growing as a weed or as part of normal farming practices.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:44958
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_44958
has related synonym: blue mud-plantain
has related synonym: ducksalad
has OBO namespace: plant_environment_ontology
subclass of: Liliopsida

Echinodorus berteroi
type: Class
has definition: The exposure of reference/experimental plant to monocot plant Echinodorus berteroi, found in its growth environment. This plant may be growing as a weed or as part of normal farming practices.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: upright burhead
has OBO namespace: plant_environment_ontology
subclass of: Echinodorus spp.

Echinodorus cordifolius
type: Class
has definition: The exposure of reference/experimental plant to monocot plant Echinodorus cordifolius, found in its growth environment. This plant may be growing as a weed or as part of normal farming practices.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:13048
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_13048
has related synonym: Texas mudbaby
has related synonym: creeping burhead
has OBO namespace: plant_environment_ontology
subclass of: Echinodorus spp.

Ammannia spp.
type: Class
has definition: The exposure of reference/experimental plant to dicot plant Ammannia spp. found in its growth environment. This plant may be growing as a weed or as part of normal farming practices.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: Eudicotyledon

Bacopa spp.
type: Class
has definition: The exposure of reference/experimental plant to dicot plant Bacopa spp. found in its growth environment. This plant may be growing as a weed or as part of normal farming practices.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: Eudicotyledon

Cyperus difformis
type: Class
has definition: The exposure of reference/experimental plant to monocot plant Cyperus difformis, found in its growth environment. This plant may be growing as a weed or as part of normal farming practices.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: flatsedge
has related synonym: smallflower umbrellaplant
has OBO namespace: plant_environment_ontology
subclass of: Cyperus spp.

Scirpus fluviatilis
type: Class
has definition: The exposure of reference/experimental plant to monocot plant Scirpus fluviatilis, found in its growth environment. This plant may be growing as a weed or as part of normal farming practices.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: river bulrush
has OBO namespace: plant_environment_ontology
subclass of: Scirpus spp.

Cyperus iria
type: Class
has definition: The exposure of reference/experimental plant to monocot plant Cyperus difformis, found in its growth environment. This plant may be growing as a weed or as part of normal farming practices.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: rice field flatsedge
has OBO namespace: plant_environment_ontology
subclass of: Cyperus spp.

Scirpus mucronatus
type: Class
has definition: The exposure of reference/experimental plant to monocot plant Scirpus mucronatus, found in its growth environment. This plant may be growing as a weed or as part of normal farming practices.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: ricefield bulrush
has OBO namespace: plant_environment_ontology
subclass of: Scirpus spp.

Alisma plantago-aquatica
type: Class
has definition: The exposure of reference/experimental plant to monocot plant Alisma plantago-aquatica found in its growth environment. This plant may be growing as a weed or as part of normal farming practices.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:15000
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_15000
has related synonym: water plantain
has OBO namespace: plant_environment_ontology
subclass of: Liliopsida

Liliopsida
type: Class
has definition: The exposure of reference/experimental plant to monocot plants found in its growth environment. These plants may be growing as a weed or as part of normal farming practices.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:4447
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_4447
has related synonym: monocot
has related synonym: monocotyledon
has OBO namespace: plant_environment_ontology
subclass of: Viridiplantae

gaseous environment
type: Class
has definition: The use of gasses in a given environment to study various types of responses on their extrinsic and/or intrinsic stimulus.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: abiotic environment

aerobic environment
type: Class
has definition: The use of conditions in which gaseous or dissolved oxygen is present to study various types of responses on their extrinsic and/or intrinsic stimulus.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: gaseous environment

anaerobic environment
type: Class
has definition: The use of conditions in which gaseous or dissolved oxygen is absent (devoid of dioxygen) to study various types of responses on their extrinsic and/or intrinsic stimulus.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: gaseous environment

Echinochloa glabrescens
type: Class
has definition: The exposure of reference/experimental plant to monocot plant Echinochloa glabrescens found in its growth environment. This plant may be growing as a weed or as part of normal farming practices.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: barnyardgrass
has OBO namespace: plant_environment_ontology
subclass of: Echinochloa spp.

seasonal environment
type: Class
has definition: The treatment involving an exposure to a given conditions of regional seasons.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: abiotic environment

Echinochloa crus-galli
type: Class
has definition: The exposure of reference/experimental plant to monocot plant Echinochloa crus-galli, found in its growth environment. This plant may be growing as a weed or as part of normal farming practices.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:90397
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_90397
has related synonym: barnyardgrass
has related synonym: cockspur grass
has OBO namespace: plant_environment_ontology
subclass of: Echinochloa spp.

Typha spp.
type: Class
has definition: The exposure of reference/experimental plant to monocot plant Typha spp., found in its growth environment. This plant may be growing as a weed or as part of normal farming practices.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:4732
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_4732
has related synonym: cattail
has OBO namespace: plant_environment_ontology
subclass of: Liliopsida

Leptochloa fascicularis
type: Class
has definition: The exposure of reference/experimental plant to monocot plant Leptochloa fascicularis found in its growth environment. This plant may be growing as a weed or as part of normal farming practices.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: bearded sprangeltop
has OBO namespace: plant_environment_ontology
subclass of: Liliopsida

Mammalia
type: Class
has definition: The exposure of plant to the anilmals of higher order that may be resopnsible for damaging the plant due to grazing or feeding practices.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:40674
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_40674
has related synonym: mammal
has OBO namespace: plant_environment_ontology
subclass of: Metazoa

rabi season
type: Class
has definition: The treatment involving an exposure to the crop season (October-March) as practised in South Asia.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: seasonal environment

kharif season
type: Class
has definition: The treatment involving an exposure to the crop season (May-October) as practised in South Asia.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: seasonal environment

winter season
type: Class
has definition: The treatment involving an exposure to the winter season.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: seasonal environment

summer season
type: Class
has definition: The treatment involving an exposure to the summer season.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: seasonal environment

spring season
type: Class
has definition: The treatment involving an exposure to the spring season.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: seasonal environment

autumn season
type: Class
has definition: The treatment involving an exposure to the autumn season.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: seasonal environment

dicot weed plant neighbor
type: Class
has definition: OBSOLETE.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: ObsoleteClass

dicot mixed crop neighbor
type: Class
has definition: OBSOLETE.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: ObsoleteClass

antibiotic regimen
type: Class
has definition: Treatment involving the use of antibiotic for selection purposes.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: chemical regimen

non-mineral nutrient regimen
type: Class
has definition: Treatment involving the exposure of plant to molecular forms of nutrient as supplement to study various types of responses.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: nutrient regimen

mineral nutrient regimen
type: Class
has definition: Treatment involving the use of mineral supplement to study various types of responses.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: nutrient regimen

primary macronutrient
type: Class
has definition: Definition
  label: Treatment involving the use of macronutrients (N, P, K) as supplement to study various types of responses. These macronutrients comprise the elements N, P and K that are required by the plant in greatest quantities for normal growth.
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: macronutrient regimen

secondary macronutrient
type: Class
has definition: Treatment involving the use of macronutrients (Ca, Mg, S) as supplement to study various types of responses. These macronutrients are used less often as fertilizers than the primary elements.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: macronutrient regimen

other nutrient regimen
type: Class
has definition: Treatment involving the exposure of plant to elemental forms of nutrient as supplement to study various types of responses. These are not considered essential elements.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: nutrient regimen

sodium chloride regimen
type: Class
has definition: Treatment involving the use of sodium chloride salt as supplement to liquid and soil growth media to study various types of responses on its application.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: NaCl treatment
has OBO namespace: plant_environment_ontology
subclass of: salt regimen

soil environment
type: Class
has definition: The treatment involving growing plants and exposing them to soil growth media with varying contents.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: solid growth media

soil texture
type: Class
has definition: The treatment involving growing plants in varying textures of soil growth media.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: soil environment

sand content
type: Class
has OBO namespace: plant_environment_ontology
subclass of: soil texture

organic matter content
type: Class
has OBO namespace: plant_environment_ontology
subclass of: soil texture

silt content
type: Class
has OBO namespace: plant_environment_ontology
subclass of: soil texture

clay content
type: Class
has OBO namespace: plant_environment_ontology
subclass of: soil texture

Cochliobolus spp.
type: Class
has definition: Treatment involving the exposure of plant to the pathogen Cochliobolus spp.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:5015
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_5015
has OBO namespace: plant_environment_ontology
subclass of: Ascomycota

soil flora
type: Class
has definition: OBSOLETE. A treatment involving growing plants and exposing them to varying types of flora in soil growth media.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: ObsoleteClass

soil fauna
type: Class
has definition: OBSOLETE. A treatment involving growing plants and exposing them to varying types of fauna in soil growth media.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: ObsoleteClass

soil pH environment
type: Class
has definition: The treatment involving growing plants in varying pH levels of soil growth media.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: soil environment

acidic pH soil environment
type: Class
has definition: The treatment involving an exposure to acidic pH levels of soil growth media.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: soil pH environment
subclass of: acidic pH growth media environment

Sphaerulina oryzina
type: Class
has definition: Treatment involving the exposure of plant to the pathogen Sphaerulina oryzina. It is a causal agent for rice Narrow Brown Leaf Spot disease.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:237189
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_237189
has related synonym: Cercospora janseana
has related synonym: Cercospora oryzae
has OBO namespace: plant_environment_ontology
subclass of: Fungi

tropical region
type: Class
has definition: Definition
  label: Exposure to the geographical region of the Earth limited in latitude by the two tropics namely, the Tropic of Cancer and the Tropic of Capricorn, and thus centered on the equator.. This area lies approximately between 23.5 N latitude and 23.5 S latitude, and includes all the parts of the Earth where the sun reaches a point directly overhead at least once during the solar year (north of the Tropic of Cancer and south of the Tropic of Capricorn the sun never reaches an azimuth of 90 or directly overhead).
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: ecological environment

basic pH soil environment
type: Class
has definition: The treatment involving an exposure to basic pH levels of soil growth media.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: soil pH environment
subclass of: basic pH growth media environment

DCMU regimen
type: Class
has definition: It blocks the reduction of plastoquinone in the photosynthetic light reaction and keeps the plastoquinone pool oxidized.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: 3-(3,4-dichloro-phenyl)-1,1-dimethylurea
has related synonym: dichlorophenyldimethyl urea
has related synonym: diuron
has OBO namespace: plant_environment_ontology
subclass of: herbicide regimen

ecological environment
type: Class
has definition: The treatment involving an exposure to the various factors that comprise a geographical/regional location.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: abiotic environment

Entyloma oryzae
type: Class
has definition: Treatment involving the exposure of plant to the pathogen Entyloma oryzae. It is a causal agent for rice Leaf Smut disease.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
has related synonym: Entyloma dactylidis
has related synonym: Entyloma lineatum
has OBO namespace: plant_environment_ontology
subclass of: Basidiomycota

cytokinin regimen
type: Class
has definition: Treatment involving the use of cytokinin (or its homolog) growth hormone to study various types of responses on its extrinsic and/or intrinsic application.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: 6-benzylaminopurine
has related synonym: N-benzyl-adenine
has related synonym: verdan senescence
has OBO namespace: plant_environment_ontology
subclass of: growth hormone regimen

hydroponic plant culture media
type: Class
has definition: The treatment suggesting the use of liquid growth media for growing the plants.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: soilless pant culture media
has OBO namespace: plant_environment_ontology
subclass of: liquid growth media

ethylene regimen
type: Class
has definition: Treatment involving the use of ethylene (or its homolog) growth hormone to study various types of responses on its extrinsic and/or intrinsic application.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: gaseous environment
subclass of: growth hormone regimen

gibberellic acid regimen
type: Class
has definition: Treatment involving the use of GA (or its homolog) growth hormone to study various types of responses on its extrinsic and/or intrinsic application.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: GA regimen
has OBO namespace: plant_environment_ontology
subclass of: growth hormone regimen

indole acetic acid regimen
type: Class
has definition: Treatment involving the use of IAA (or its homolog) growth hormone to study various types of responses on its extrinsic and/or intrinsic application.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: IAA regimen
has OBO namespace: plant_environment_ontology
subclass of: auxin regimen

suspension cell culture media
type: Class
has definition: The treatment suggesting the use of liquid growth media for cell cultured samples.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: liquid growth media

Microdochium oryzae
type: Class
has definition: Definition
  label: Treatment involving the exposure of plant to the pathogen Microdochium oryzae. It is a causal agent for rice various forms of Leaf scald disease such as Brown Leaf Blight Disease , Leaf Sheath Browning Disease, Leaf Tip Blight Disease and Leaf Tip Dying Disease.
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
has related synonym: Rhynchosporium oryzae
has OBO namespace: plant_environment_ontology
subclass of: Ascomycota

Basidiomycota
type: Class
has definition: Treatment involving the exposure of plant to the pathogen belonging to Basidiomycetes class.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:5204
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_5204
has related synonym: basidiomycetes
has OBO namespace: plant_environment_ontology
subclass of: Fungi

auxin regimen
type: Class
has definition: Treatment involving the use of auxin (or its homolog) growth hormone to study various types of responses on its extrinsic and/or intrinsic application.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: growth hormone regimen

high light intensity regimen
type: Class
has OBO namespace: plant_environment_ontology
subclass of: light intensity regimen

moderate light intensity regimen
type: Class
has OBO namespace: plant_environment_ontology
subclass of: light intensity regimen

Tilletia barclayana
type: Class
has definition: Treatment involving the exposure of plant to the pathogen Tilletia barclayana. It is a causal agent for rice Kernel Smut disease.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:157178
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_157178
has related synonym: Neovossia horrida
has OBO namespace: plant_environment_ontology
subclass of: Basidiomycota

light quantity regimen
type: Class
has definition: Definition
  label: In biological experiments often it refer to the length of the exposure time. The treatment also includes the quantity of light falling on a per unit area. This may be expressed either in terms of hours for which teh radiation was available or in the units of luminous flux or the lumens.
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: photoperiod regimen
has OBO namespace: plant_environment_ontology
subclass of: radiation quantity regimen

sulfate fertilizer regimen
type: Class
has definition: Treatment involving the use of sulfate fertilizer and its components as supplements to study various types of responses.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: chemical fertilizer regimen

jasmonic acid regimen
type: Class
has definition: Treatment involving the use of JA (or its homolog) growth hormone to study various types of responses on its extrinsic and/or intrinsic application.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: JA regimen
has OBO namespace: plant_environment_ontology
subclass of: growth hormone regimen

river bank region
type: Class
has OBO namespace: plant_environment_ontology
subclass of: flood prone region

sea coast region
type: Class
has OBO namespace: plant_environment_ontology
subclass of: flood prone region

Phoma sorghina
type: Class
has definition: Treatment involving the exposure of plant to the pathogen Phoma sorghina. It is a causal agent for rice Glume Blight Disease disease.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:73005
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_73005
has OBO namespace: plant_environment_ontology
has db xref: NCBI_taxid:73005
  type: DbXref
  has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_73005
subclass of: Ascomycota

other animals
type: Class
has definition: Treatment involving the exposure of plant to the pests that do not falll under the well known classes of birds, mammals, insects, nematode and molluscs.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: Metazoa

fertilizer regimen
type: Class
has definition: Treatment involving the use of fertilier to study various types of responses.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: nutrient regimen

chemical fertilizer regimen
type: Class
has definition: Treatment involving the use of inorganic fertilizer and its components as supplements to study various types of responses.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: fertilizer regimen

natural fertilizer regimen
type: Class
has definition: Treatment involving the use of organic fertilizer and its component as supplements to study various types of responses.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: organic fertilizer regimen
has OBO namespace: plant_environment_ontology
subclass of: fertilizer regimen

Ceratobasidium oryzae-sativae
type: Class
has definition: Treatment involving the exposure of plant to the pathogen Ceratobasidium oryzae-sativae. It is a causal agent for rice Aggregate Sheath Spot disease, which is also known as Brown Sclerotial disease.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:63189
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_63189
has related synonym: Ceratobasidium oryzae-sativae
has related synonym: Ceratobasidium sativae
has related synonym: Rhizoctonia oryzae-sativae
has OBO namespace: plant_environment_ontology
subclass of: Basidiomycota

bone meal regimen
type: Class
has OBO namespace: plant_environment_ontology
subclass of: natural fertilizer regimen

ammonium nitrate regimen
type: Class
has definition: Treatment involving the use of ammonium nitrate supplement to study various types of responses.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: nitrate regimen

seaweed extract regimen
type: Class
has OBO namespace: plant_environment_ontology
subclass of: natural fertilizer regimen

wood ash regimen
type: Class
has OBO namespace: plant_environment_ontology
subclass of: natural fertilizer regimen

fish meal regimen
type: Class
has OBO namespace: plant_environment_ontology
subclass of: natural fertilizer regimen

sodium nitrate regimen
type: Class
has definition: Treatment involving the use of sodium nitrate supplement to study various types of responses.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: nitrate regimen

calcium nitrate regimen
type: Class
has definition: Treatment involving the use of calcium nitrate supplement to study various types of responses.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: nitrate regimen

potassium nitrate regimen
type: Class
has definition: Treatment involving the use of potassiumium nitrate supplement to study various types of responses.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: nitrate regimen

ammonium sulfate regimen
type: Class
has definition: Treatment involving the use of ammonium sulfate supplement to study various types of responses.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: sulfate fertilizer regimen
subclass of: nitrogen fertilizer regimen

ferrous sulfate regimen
type: Class
has definition: Treatment involving the use of ferrous sulfate supplement to study various types of responses.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: sulfate fertilizer regimen

potassium sulfate regimen
type: Class
has definition: Treatment involving the use of potassium sulfate supplement to study various types of responses.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: sulfate fertilizer regimen

superphosphate regimen
type: Class
has definition: Treatment involving the use of super phosphate supplement to study various types of responses.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: phosphate fertilizer regimen

urea regimen
type: Class
has definition: Treatment involving the use of urea as source of nitrogen supplement to study various types of responses.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: nitrogen fertilizer regimen

nitrogen fertilizer regimen
type: Class
has definition: Treatment involving the use of nitrogen fertilizer and its components as supplements to study various types of responses.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: chemical fertilizer regimen

phosphate fertilizer regimen
type: Class
has definition: Treatment involving the use of phosphate fertilizer and its components as supplements to study various types of responses.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: chemical fertilizer regimen

NPK fertilizer regimen
type: Class
has definition: Treatment involving the use of nitrogen, phosphorus and potassium supplements to study various types of responses.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: nitrogen fertilizer regimen
subclass of: phosphate fertilizer regimen

abscisic acid regimen
type: Class
has definition: STreatment involving the use of abscisic acid (or its homolog) growth hormone to study various types of responses on its extrinsic and/or intrinsic application.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: ABA regimen
has OBO namespace: plant_environment_ontology
subclass of: growth hormone regimen

Stramenopiles
type: Class
has definition: Treatment involving the exposure of plant to the Stramenopiles (heterokonts) present in the gorowth environment.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:33634
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_33634
has related synonym: chromophyta
has related synonym: heterokont
has OBO namespace: plant_environment_ontology
subclass of: pest/pathogen/animal/plant environment

Ascomycota
type: Class
has definition: Treatment involving the exposure of plant to the pathogen belonging to Ascomycetes class.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:4890
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_4890
has related synonym: ascomycetes
has OBO namespace: plant_environment_ontology
subclass of: Fungi

Proteobacteria
type: Class
has definition: Treatment involving the exposure of plant to the pathogenic purple bacteria.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:1224
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_1224
has related synonym: purple bacteria
has OBO namespace: plant_environment_ontology
subclass of: Bacteria

ssRNA positive-strand virus with no DNA stage
type: Class
has definition: Treatment involving the exposure of plant to the pathogenic single strand RNA positive stand virus.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: Virus

dsRNA virus
type: Class
has definition: Treatment involving the exposure of plant to the pathogenic double stranded RNA virus.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:35325
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_35325
has related synonym: dsRNA nonenveloped viruses
has OBO namespace: plant_environment_ontology
subclass of: Virus

ssRNA negative-strand virus
type: Class
has definition: Treatment involving the exposure of plant to the pathogenic single strand RNA negative stand virus.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: Virus

retroid virus
type: Class
has definition: Treatment involving the exposure of plant to the pathogenic retroid virus.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:35268
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_35268
has OBO namespace: plant_environment_ontology
subclass of: Virus

rice necrosis mosaic virus
type: Class
has definition: Treatment involving the exposure of plant to the rice necrosis mosaic virus. It is a causal agent for rice necrosis mosaic disease.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:59500
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_59500
has related synonym: RNMV
has related synonym: rice necrosis mosaic virus
has OBO namespace: plant_environment_ontology
has alternative id: EO:0007354
subclass of: ssRNA positive-strand virus with no DNA stage

Lepidoptera
type: Class
has definition: Treatment involving the exposure of plant to the pest of lepidoptera class.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:7088
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_7088
has related synonym: butterfly
has related synonym: moth
has OBO namespace: plant_environment_ontology
subclass of: Insecta

Spodoptera spp.
type: Class
has definition: Treatment involving the exposure of plant to the pest Spodoptera spp.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:7106
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_7106
has OBO namespace: plant_environment_ontology
subclass of: Lepidoptera

Hemiptera
type: Class
has definition: Treatment involving the exposure of plant to the pest of hemiptera class.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:7524
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_7524
has related synonym: bug
has OBO namespace: plant_environment_ontology
subclass of: Insecta

Pseudaletia spp.
type: Class
has definition: Treatment involving the exposure of plant to the pest rice army worm.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:7104
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_7104
has related synonym: armyworm
has OBO namespace: plant_environment_ontology
subclass of: Lepidoptera

Gibberella spp.
type: Class
has definition: Treatment involving the exposure of plant to the pathogen Gibberella spp.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:5126
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_5126
has OBO namespace: plant_environment_ontology
subclass of: Ascomycota

Diptera
type: Class
has definition: Treatment involving the exposure of plant to the pest of Diptera class.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:7147
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_7147
has related synonym: fly
has OBO namespace: plant_environment_ontology
subclass of: Insecta

Coleoptera
type: Class
has definition: Treatment involving the exposure of plant to the pest commonly called as beetles or Coleoptera.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:7041
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_7041
has related synonym: beetle
has OBO namespace: plant_environment_ontology
subclass of: Insecta

Thysanoptera
type: Class
has definition: Treatment involving the exposure of plant to the pest of Thysanoptera class.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:30262
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_30262
has related synonym: thrips
has OBO namespace: plant_environment_ontology
subclass of: Insecta

Chilo
type: Class
has definition: Treatment involving the exposure of plant to the pest Chilo.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:168630
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_168630
has related synonym: stalk borer
has related synonym: stemborer
has OBO namespace: plant_environment_ontology
subclass of: Lepidoptera

Eysarcoris trimaculatus
type: Class
has definition: Treatment involving the exposure of plant to the pest rice spotting bug.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: rice spotting bug
has OBO namespace: plant_environment_ontology
subclass of: Hemiptera

pest/pathogen/animal/plant environment
type: Class
has definition: Treatment involving the exposure of plant to the pest/pathogen/animal/plants present as part of its growth environment.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: biotic environment

genetic environment
type: Class
has definition: OBSOLETE.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: ObsoleteClass

Hirschmaniella spp.
type: Class
has definition: Treatment involving the exposure of plant to the pest Hirschmaniella spp. It is a causal agent for rice root nematode disease.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: Nematoda

Meloidogyne spp.
type: Class
has definition: Treatment involving the exposure of plant to the pest Meloidogyne spp. It is a causal agent for rice root knot nematode disease.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:189290
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_189290
has related synonym: root-knot nematode
has OBO namespace: plant_environment_ontology
subclass of: Nematoda

intermittent light regimen
type: Class
has definition: In biological experiments it refer to the intermittent exposure of plant to the cycles of light and dark or one light Vs the another type of light
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: light quantity regimen

UV-C light regimen
type: Class
has definition: The treatment using UV-C light either exclusively or as part of a supplemental electromagnetic radiation in the wavelength range of 280-10nm.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: UV light regimen

near infra-red light regimen
type: Class
has definition: Definition
  label: The treatment using infra-red light either exclusively or as part of a supplemental light of near IR band that contains energy in the range of wavelengths 750-1300nm, which is closest to the visible light.
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: near IR light regimen
has OBO namespace: plant_environment_ontology
subclass of: IR light regimen

middle infra-red light regimen
type: Class
has definition: The treatment using middle infra-red light either exclusively or as part of a supplemental light treatment involving middle IR band that contains energy in the range of wavelengths 1300-3000nm.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: IR light regimen

far infra-red light regimen
type: Class
has definition: The treatment using far infra-red light either exclusively or as part of a supplemental light treatment involving far IR band that contains energy in the range of wavelengths 3000-14000nm.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: IR light regimen

basic pH growth media environment
type: Class
has definition: The treatment involving an exposure to basic pH levels of the growth media.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: basic pH environment
has OBO namespace: plant_environment_ontology
has alternative id: EO:0007169
subclass of: pH regimen

acidic pH growth media environment
type: Class
has definition: The treatment involving an exposure to acidic pH levels of the growth media.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: acidic pH environment
has OBO namespace: plant_environment_ontology
has alternative id: EO:0007170
subclass of: pH regimen

Magnaporthe spp.
type: Class
has definition: The treatment involving an exposure of plant to the pathogen Magnaporthe spp.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:148303
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_148303
has OBO namespace: plant_environment_ontology
subclass of: Ascomycota

Achlya spp.
type: Class
has definition: The treatment involving an exposure of plant to the Achlya spp.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:4765
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_4765
has OBO namespace: plant_environment_ontology
subclass of: Stramenopiles

Echinochloa spp.
type: Class
has definition: Definition
  label: The treatment involving an exposure of reference/experimental plant to monocot plant Echinochloa spp. found in its growth environment. This plant may be growing as a weed or as part of normal farming practices.
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:45618
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_45618
has OBO namespace: plant_environment_ontology
subclass of: Liliopsida

Echinodorus spp.
type: Class
has definition: Definition
  label: The treatment involving an exposure of reference/experimental plant to monocot plant Echinodorus spp., found in its growth environment. This plant may be growing as a weed or as part of normal farming practices.
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:13047
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_13047
has related synonym: burhead
has OBO namespace: plant_environment_ontology
subclass of: Liliopsida

Sagittaria spp.
type: Class
has definition: Definition
  label: The treatment involving an exposure of reference/experimental plant to monocot plant Sagittaria spp. found in its growth environment. This plant may be growing as a weed or as part of normal farming practices.
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:4450
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_4450
has related synonym: arrowhead
has OBO namespace: plant_environment_ontology
subclass of: Liliopsida

Scirpus spp.
type: Class
has definition: Definition
  label: The treatment involving an exposure of reference/experimental plant to monocot plant Scirpus spp., found in its growth environment. This plant may be growing as a weed or as part of normal farming practices.
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:46334
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_46334
has OBO namespace: plant_environment_ontology
subclass of: Liliopsida

Cyperus spp.
type: Class
has definition: Definition
  label: The treatment involving an exposure of reference/experimental plant to monocot plant Cyperus spp. found in its growth environment. This plant may be growing as a weed or as part of normal farming practices.
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:4610
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_4610
has OBO namespace: plant_environment_ontology
subclass of: Liliopsida

Scirpophaga spp.
type: Class
has definition: The treatment involving an exposure of plant to the pest Scirpophaga spp.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:72365
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_72365
has OBO namespace: plant_environment_ontology
subclass of: Lepidoptera

Erwinia spp.
type: Class
has definition: The treatment involving an exposure of plant to the pathogen sof Genus Erwinia.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:551
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_551
has OBO namespace: plant_environment_ontology
subclass of: Proteobacteria

Pseudomonas spp.
type: Class
has definition: The treatment involving an exposure of plant to the pathogenic Pseudomonas sp.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:286
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_286
has OBO namespace: plant_environment_ontology
subclass of: Proteobacteria

Xanthomonas spp.
type: Class
has definition: The treatment involving an exposure of plant to the pathogenic Xanthomonas sp.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:338
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_338
has OBO namespace: plant_environment_ontology
subclass of: Proteobacteria

gravity
type: Class
has definition: The treatment involving use of gravity factor to study various types of responses in presence, absence or modified levels of gravity.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: physical environment

growth media
type: Class
has definition: The treatment involving use of growth media for growing the plants or tissue cultured samples.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: abiotic environment

Xanthomonas oryzae
type: Class
has definition: The treatment involving an exposure of plant to the pathogen Xanthomonas oryzae. It is a causal agent for rice bacterial blight disease.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:347
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_347
has related synonym: Pseudomonas oryzae
has OBO namespace: plant_environment_ontology
subclass of: Xanthomonas spp.

chemical mutagen
type: Class
has definition: The treatment involving use of mutagen for the mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: chemical regimen

facultative anaerobic environment
type: Class
has definition: OBSOLETE.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: ObsoleteClass

radiation regimen
type: Class
has definition: The treatment involving an exposure with a radiation type, intesity or quantity.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: light regimen
has OBO namespace: plant_environment_ontology
subclass of: abiotic environment

radiation intensity regimen
type: Class
has definition: The treatment involving amount of energy of any radiation incident upon (or flowing through) unit area, perpendicular to the radiation source, in unit time.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: radiation regimen

radiation quantity regimen
type: Class
has definition: Definition
  label: In biological experiments it refer to the treatment involving radiation in terms of length of the exposure time. It also includes the quantity of radiation falling on a per unit area. This is expressed in the units of luminous flux or the lumens.
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: radiation regimen

radiation quality regimen
type: Class
has definition: Definition
  label: The treatment involving an exposure to a given type of radiation. Often it is in the form of electromagnetic and ionizing radiation such as light (infrared, visible or ultraviolet), x-rays, gamma rays, etc.
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: radiation regimen

soil type
type: Class
has definition: The treatment involving growing plants in different types of soil growth media.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: soil environment

clay soil
type: Class
has OBO namespace: plant_environment_ontology
subclass of: soil type

loam soil
type: Class
has OBO namespace: plant_environment_ontology
subclass of: soil type

sandy soil
type: Class
has OBO namespace: plant_environment_ontology
subclass of: soil type

sandy loam soil
type: Class
has OBO namespace: plant_environment_ontology
subclass of: soil type

water temperature regimen
type: Class
has definition: The treatment involving an exposure to water with varying degree of temperature, which may depend on regional environment.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: temperature environment
subclass of: water environment

air temperature regimen
type: Class
has definition: The treatment involving an exposure to wind with varying degree of temperature, which may depend on the study type or the regional environment.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: temperature environment
subclass of: wind environment

continuous light regimen
type: Class
has definition: The treatment involving continuous exposure of light to the plant.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: light quantity regimen

day light regimen
type: Class
has definition: The treatment involving an exposure of plant to the scheduled or natural exposure of day light and night cycles to the plant.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: intermittent light regimen

standing deep water
type: Class
has definition: The treatment involving an exposure to standing water during whole life span of the plant. This also results in anaerobic soil conditions for a long period.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: standing water

growth hormone regimen
type: Class
has definition: The treatment involving use of growth hormones to study various types of responses on their extrinsic and/or intrinsic application.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: chemical regimen

Pythium spinosum
type: Class
has definition: Definition
  label: The treatment involving an exposure of plant to the Pythium spinosum. It is a causal agent for rice seedling blight (fungal) or feeder root necrosis or water mold dieases. Water mold diease is also called as seed rot or seedling damping-off disease.
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:82948
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_82948
has OBO namespace: plant_environment_ontology
subclass of: Pythium spp.

pesticide regimen
type: Class
has definition: The treatment involving use of pesticides to study various types of responses on their application.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: chemical regimen

hygromycin regimen
type: Class
has definition: The treatment involving use of hygromycin B antibiotic for selection purposes.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: Antibiotic A-396-II
has related synonym: hygromycin B regimen
has OBO namespace: plant_environment_ontology
subclass of: antibiotic regimen

pH regimen
type: Class
has definition: The treatment involving exposure of plants to varying levels of pH of the growth media.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: growth media

flood water
type: Class
has definition: The treatment involving an exposure to standing water from flash floods for a small part of plant's life span. This also results in anaerobic soil conditions for a short period.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: standing water

warm/hot temperature regimen
type: Class
has definition: The treatment involving an exposure to above optimal temperature, which may depend on the study type or the regional environment.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: temperature environment

cold temperature regimen
type: Class
has definition: The treatment involving an exposure to cold or sub-optimal temperature, which may depend on the study type or the regional environment.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: temperature environment

temperature environment
type: Class
has definition: The treatment involving an exposure to varying degree of temperature, which may depend on regional environment.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: abiotic environment

altitute
type: Class
has definition: The treatment involving an exposure to a given elevation/height above sea level.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: ecological environment

Pythium myriotylum
type: Class
has definition: Suggests the exposure of plant to the Pythium myriotylum. It is a causal agent for rice feeder root necrosis disease.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:82941
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_82941
has OBO namespace: plant_environment_ontology
subclass of: Pythium spp.

atmospheric pressure
type: Class
has definition: Definition
  label: The treatment involving an exposure to a given pressure of the atmosphere at a given point. Its measurement can be expressed in several ways. One is in millibars. Another is in inches or millimeters of mercury (Hg).
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: barometric pressure
has OBO namespace: plant_environment_ontology
subclass of: ecological environment

Pythium irregulare
type: Class
has definition: The treatment involving exposure of plant to the Pythium irregulare. It is a causal agent for rice feeder root necrosis disease.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:36331
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_36331
has OBO namespace: plant_environment_ontology
subclass of: Pythium spp.

2,4-dichlorophenoxyacetic acid
type: Class
has definition: The treatment involving use of 2,4-D growth hormone/herbicide to study various types of responses on its extrinsic and/or intrinsic application.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:94-75-7
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_94-75-7
has related synonym: 2,4-D regimen
has related synonym: Amidox
  type: Synonym
  has db xref: CAS:94-75-7
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_94-75-7
has related synonym: B-Selektonon
  type: Synonym
  has db xref: CAS:94-75-7
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_94-75-7
has related synonym: Crotilin
  type: Synonym
  has db xref: CAS:94-75-7
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_94-75-7
has related synonym: Decamine
  type: Synonym
  has db xref: CAS:94-75-7
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_94-75-7
has related synonym: Dicopur
  type: Synonym
  has db xref: CAS:94-75-7
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_94-75-7
has related synonym: U-5043
  type: Synonym
  has db xref: CAS:94-75-7
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_94-75-7
has related synonym: Weed Tox
  type: Synonym
  has db xref: CAS:94-75-7
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_94-75-7
has related synonym: Weedar 64A
  type: Synonym
  has db xref: CAS:94-75-7
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_94-75-7
has related synonym: Weedone-2,4-DP
  type: Synonym
  has db xref: CAS:94-75-7
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_94-75-7
has OBO namespace: plant_environment_ontology
subclass of: auxin regimen
subclass of: herbicide regimen

rainfall
type: Class
has definition: The treatment involving an exposure to a given amount of rainfall.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: ecological environment
subclass of: water environment

Pythium graminicola
type: Class
has definition: The treatment involving exposure of plant to the Pythium graminicola. It is a causal agent for rice feeder root necrosis disease.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:82937
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_82937
has OBO namespace: plant_environment_ontology
subclass of: Pythium spp.

herbicide regimen
type: Class
has definition: The treatment involving use of herbicides to study various types of responses on their application.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: pesticide regimen

Pythium dissotocum
type: Class
has definition: Definition
  label: The treatment involving exposure of plant to the Pythium dissotocum. It is a causal agent for rice seedling blight (fungal) or water mold dieases. Water mold diease is also called as seed rot or seedling damping-off disease.
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:82936
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_82936
has OBO namespace: plant_environment_ontology
subclass of: Pythium spp.

salt regimen
type: Class
has definition: Definition
  label: The treatment involving use of salts as supplement to liquid and soil growth media to study various types of responses on their application. This treatment may be used to simulate the growth conditions of sea coast regions and saline/sodic soils.
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: chemical regimen

Pythium catenulatum
type: Class
has definition: The treatment involving exposure of plant to the Pythium catenulatum. It is a causal agent for rice feeder root necrosis disease.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:83917
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_83917
has OBO namespace: plant_environment_ontology
subclass of: Pythium spp.

salicylic acid regimen
type: Class
has definition: The treatment involving use of salicylic acid to study various types of responses on its extrinsic and/or intrinsic application.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: chemical regimen

Pythium arrhenomanes
type: Class
has definition: The treatment involving exposure of plant to the Pythium arrhenomanes. It is a causal agent for rice feeder root necrosis disease.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:83932
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_83932
has OBO namespace: plant_environment_ontology
subclass of: Pythium spp.

chemical regimen
type: Class
has definition: The treatment involving use of chemical(s) to study various types of responses on their extrinsic and/or intrinsic application.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: other chemical regimen
has OBO namespace: plant_environment_ontology
has alternative id: EO:0007042
subclass of: abiotic environment

Ustilaginoidea virens
type: Class
has definition: The treatment involving exposure of plant to the pathogen Ustilaginoidea virens. It is a causal agent for rice False Smut Disease also called as Green Smut disease.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:124427
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_124427
has OBO namespace: plant_environment_ontology
subclass of: Ascomycota

abiotic environment
type: Class
has definition: The treatment involving an exposure to the abiotic/non-biological factors such as chemicals, location, growth conditions etc.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: plant environment ontology

Drechslera gigantea
type: Class
has definition: The treatment involving exposure of plant to the pathogen Drechslera gigantea. It is a causal agent for rice Eyespot disease.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
has OBO namespace: plant_environment_ontology
subclass of: Ascomycota

day light intensity
type: Class
has OBO namespace: plant_environment_ontology
subclass of: light intensity regimen

Sclerospora macrospora
type: Class
has definition: The treatment involving exposure of plant to the pathogen Sclerophthora macrospora. It is a causal agent for rice Downy Mildew disease.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
has related synonym: Sclerophthora macrospora
has OBO namespace: plant_environment_ontology
subclass of: Sclerospora spp.

rice ragged stunt virus
type: Class
has definition: The treatment involving exposure of plant to the rice ragged stunt virus. It is a causal agent for rice ragged stunt disease.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:42475
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_42475
has related synonym: RRSV
has related synonym: rice ragged stunt oryzavirus
has related synonym: rice ragged stunt virus
has OBO namespace: plant_environment_ontology
has alternative id: EO:0007352
subclass of: dsRNA virus

light regimen
type: Class
comment: A type of light used in a commercial light box to simulate natural daylight. For experiments carried out in growth chambers, the daylight is a light source providing a color temperature of 6500+/-200 K at an illumination of 90 to 120 ft/candles. This source is typically provided by fluorescent, tungsten or halogen lamps.
has definition: The treatment involving day light as the light of the sun or the artificial light in a growth chamber.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: artificial daylight
has related synonym: artificial light
has related synonym: day light
has related synonym: natural light
has related synonym: sun light
has OBO namespace: plant_environment_ontology
has alternative id: EO:0007201
subclass of: radiation quality regimen

humidity regimen
type: Class
has definition: The treatment involving an exposure to varying degree of humidity, which may depend on regional environment.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: water environment

water environment
type: Class
has definition: The treatment involving an exposure of varying amount of water and watering frequncies, which may depend on regional environment.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: abiotic environment

long day length regimen
type: Class
has definition: The treatment involving exposure of plant to long day light duration followed by a short night cycle.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: intermittent light regimen

short day length regimen
type: Class
has definition: The treatment involving exposure of plant to short day light duration followed by a long night cycle.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: intermittent light regimen

IR light regimen
type: Class
has definition: The treatment using infra red (IR) light either exclusively or as part of a supplemental light treatment involving IR light in the wavelength range of 700nm-1mm.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: light regimen

far red light regimen
type: Class
has definition: The treatment using far red light either exclusively or as part of a supplemental light treatment involving red color light in the wavelength range of 800-700 nM.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: Pfr light
has OBO namespace: plant_environment_ontology
subclass of: light regimen

1-naphthaleneacetic acid
type: Class
has definition: The treatment involving use of 1-naphthaleneacetic acid growth hormone/herbicide to study various types of responses on its extrinsic and/or intrinsic application.
  type: Definition
  has db xref: CAS:[68-87-3]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[68-87-3]
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: NAA
has related synonym: Naphthylacetic acid
has OBO namespace: plant_environment_ontology
subclass of: auxin regimen

rice grassy stunt 2 virus
type: Class
has definition: The treatment involving exposure of plant to the rice grassy stunt 2 virus. It is a causal agent for rice grassy stunt disease.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:66266
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_66266
has related synonym: RGSV-2
has OBO namespace: plant_environment_ontology
subclass of: rice grassy stunt virus

Gaeumannomyces graminis
type: Class
has definition: Definition
  label: The treatment involving exposure of plant to the pathogen Gaeumannomyces graminis. It is a causal agent for rice Crown Sheath Rot Disease also called as Arkansas Foot Rot Disease, Black Sheath Rot Disease and Brown Sheath Rot Disease.
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:29850
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_29850
has OBO namespace: plant_environment_ontology
subclass of: Ascomycota

red light regimen
type: Class
has definition: The treatment using red light either exclusively or as part of a supplemental light treatment involving red color light in the wavelength range of 780-622 nM.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: Pr light
has OBO namespace: plant_environment_ontology
subclass of: visible light regimen

rice grassy stunt 1 virus
type: Class
has definition: The treatment involving exposure of plant to the rice grassy stunt 1 virus. It is a causal agent for rice grassy stunt disease.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:66266
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_66266
has related synonym: RGSV-1
has OBO namespace: plant_environment_ontology
subclass of: rice grassy stunt virus

Phomopsis oryzae-sativae
type: Class
has definition: The treatment involving exposure of plant to the pathogen Phomopsis oryzae-sativae. It is a causal agent for rice Collar Rot Disease disease.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:107452
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_107452
has OBO namespace: plant_environment_ontology
subclass of: Ascomycota

Virus
type: Class
has definition: The treatment involving exposure of plant to the pathogenic virus.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:10239
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_10239
has OBO namespace: plant_environment_ontology
subclass of: pest/pathogen/animal/plant environment

Cochliobolus miyabeanus
type: Class
has definition: The treatment involving exposure of plant to the pathogen Cochliobolus miyabeanus. It is a causal agent for rice Brown Spot diseaseand/or Seedling Blight (Fungal) disease.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:101162
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_101162
has related synonym: Bipolaris oryzae
has related synonym: Dreschlera oryzae
has related synonym: Helminthosporium oryzae
has OBO namespace: plant_environment_ontology
subclass of: Cochliobolus spp.

Mycoplasma
type: Class
has definition: The treatment involving exposure of plant to the mycoplasma pest.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:2093
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_2093
has OBO namespace: plant_environment_ontology
subclass of: pest/pathogen/animal/plant environment

Alternaria spp.
type: Class
has definition: The treatment involving exposure of plant to the pathogenic Alternaria sp.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:5598
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_5598
has OBO namespace: plant_environment_ontology
subclass of: Ascomycota

orange light regimen
type: Class
has definition: The treatment using orange light either exclusively or as part of a supplemental light treatment involving orange color light in the wavelength range of 622-597 nM.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: visible light regimen

yellow light regimen
type: Class
has definition: The treatment using yellow light either exclusively or as part of a supplemental light treatment involving yellow color light in the wavelength range of 597-577 nM.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: visible light regimen

green light regimen
type: Class
has definition: The treatment using green light either exclusively or as part of a supplemental light treatment involving green color light in the wavelength range of 577-492 nM.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: visible light regimen

blue light regimen
type: Class
has definition: The treatment using blue light either exclusively or as part of a supplemental light treatment involving blue color light in the wavelength range of 492-455 nM.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: visible light regimen

indigo light regimen
type: Class
has definition: The treatment using indigo light either exclusively or as part of a supplemental light treatment involving indigo color light in the wavelength range of 450-440 nM.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: visible light regimen

violet light regimen
type: Class
has definition: The treatment using violet light either exclusively or as part of a supplemental light treatment involving violet color light in the wavelength range of 455-390 nM.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: visible light regimen

visible light regimen
type: Class
has definition: Definition
  label: The treatment using visible light in the wavelength range of 380-780 nM. is the portion of the electromagnetic spectrum that is visible to the human eye. The optical spectrum is a composite, or mixture, of the various colors.
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: light regimen

UV light regimen
type: Class
has definition: The treatment using UV-B light either exclusively or as part of a supplemental light involving electromagnetic radiation in the wavelength range of 315-10nm.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: light regimen

cadmium chloride
type: Class
has definition: The treatment involving use of CdCl2 to assess response against the heavy metals.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: CdCl2
has OBO namespace: plant_environment_ontology
subclass of: chemical regimen

light intensity regimen
type: Class
has definition: The treatment involving exposure of plant or a plant part to the amount of light energy incident upon (or flowing through) unit area, perpendicular to the radiation source, in unit time.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: radiation intensity regimen

fluorine nutrient regimen
type: Class
has definition: The treatment involving exposure of plant to fluorine as supplement to study various types of responses.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: other nutrient regimen

Magnaporthe grisea
type: Class
has definition: Definition
  label: The treatment involving exposure of plant to the pathogen Magnaporthe grisea. It is a causal agent for rice various forms of Blast diseases such as Collar Blast, Leaf Blast, Neck Blast, Panicle Blast and Nodal Blast disease.
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:148305
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_148305
has related synonym: Piricularia grisea
has related synonym: Pyricularia grisea
has related synonym: Pyricularia oryzae
has related synonym: rice blast fungus
has OBO namespace: plant_environment_ontology
subclass of: Magnaporthe spp.

Cochliobolus lunatus
type: Class
has definition: The treatment involving exposure of plant to the pathogen Cochliobolus lunatus.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:5503
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_5503
has OBO namespace: plant_environment_ontology
subclass of: Cochliobolus spp.

chromium nutrient regimen
type: Class
has definition: The treatment involving exposure of plant to chromium as supplement to study various types of responses.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: other nutrient regimen

Gibberella fujikuroi
type: Class
has definition: The treatment involving exposure of plant to the pathogen Gibberella fujikuroi. It is a causal agent for rice Bakanae disease and also for a form of rice Seedling Blight (Fungal) Disease disease.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:5127
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_5127
has related synonym: Fusarium fujikuroi
has related synonym: Fusarium moniliforme
has OBO namespace: plant_environment_ontology
has alternative id: EO:0007299
subclass of: Gibberella spp.

iodine nutrient regimen
type: Class
has definition: The treatment involving exposure of plant to iodine as supplement to study various types of responses.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: other nutrient regimen

study type
type: Class
has definition: The treatment suggesting what kind of growth facility was used.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: plant environment ontology

selenium nutrient regimen
type: Class
has definition: The treatment involving exposure of plant to selenium as supplement to study various types of responses.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: other nutrient regimen

Fungi
type: Class
has definition: The treatment involving exposure of plant to the pathogenic fungus.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:4751
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_4751
has OBO namespace: plant_environment_ontology
subclass of: pest/pathogen/animal/plant environment

Pseudomonas fuscovaginae
type: Class
has definition: The treatment involving exposure of plant to the pathogen Pseudomonas fuscovaginae. It is a causal agent for rice Sheath Brown Rot disease.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:50340
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_50340
has related synonym: Pseudomonas fuscivaginae
has OBO namespace: plant_environment_ontology
has db xref: NCBI_taxid:50340
  type: DbXref
  has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_50340
subclass of: Pseudomonas spp.

silicon nutrient regimen
type: Class
has definition: The treatment involving exposure of plant to silicon as supplement to study various types of responses.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: other nutrient regimen

Pseudomonas plantarii
type: Class
has definition: The treatment involving exposure of plant to the pathogen Pseudomonas plantarii. It is a causal agent for rice Seedling Blight (Bacterial) disease.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:41899
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_41899
has related synonym: Burkholderia plantarii
has related synonym: Burkholderia vandii
has OBO namespace: plant_environment_ontology
subclass of: Pseudomonas spp.

normal temperature regimen
type: Class
has definition: OBSOLETE.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: ObsoleteClass

optimal temperature regimen
type: Class
has definition: OBSOLETE.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: ObsoleteClass

micronutrient regimen
type: Class
has definition: The treatment involving exposure of plant to elements that are required in tiny quantities for growth, as supplement to study various types of responses.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: trace element regimen
has OBO namespace: plant_environment_ontology
subclass of: mineral nutrient regimen

macronutrient regimen
type: Class
has definition: Definition
  label: The treatment involving use of element as supplement to study various types of responses. The macronutrients comprise the elements required by the plant in relatively large quantities for normal growth.
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: mineral nutrient regimen

nutrient regimen
type: Class
has definition: The treatment involving use of nutrients to study various types of responses on their extrinsic and/or intrinsic application.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: chemical regimen

iron nutrient regimen
type: Class
has definition: The treatment involving exposure of plant to micronutrient iron as supplement to study various types of responses.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: micronutrient regimen

Pseudomonas glumae
type: Class
has definition: The treatment involving exposure of plant to the pathogen Pseudomonas glumae. It is a causal agent for rice Grain Rot disease.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:337
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_337
has related synonym: Burkholderia glumae
has OBO namespace: plant_environment_ontology
subclass of: Pseudomonas spp.

chlorine nutrient regimen
type: Class
has definition: The treatment involving exposure of plant to micronutrient chlorine as supplement to study various types of responses.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: micronutrient regimen

Erwinia chrysanthemi
type: Class
has definition: The treatment involving exposure of plant to the pathogen Erwinia chrysanthemi. It is a causal agent for rice Foot Rot disease.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:556
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_556
has OBO namespace: plant_environment_ontology
subclass of: Erwinia spp.

Bacteria
type: Class
has definition: The treatment involving exposure of plant to the pathogenic bacteria.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:2
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_2
has related synonym: eubacteria
has OBO namespace: plant_environment_ontology
subclass of: pest/pathogen/animal/plant environment

Erwinia herbicola
type: Class
has definition: The treatment involving exposure of plant to the pathogen Erwinia herbicola. The susceptible plants suffer from Bacterial Palea Browning disease.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:549
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_549
has related synonym: Pantoea agglomerans
has OBO namespace: plant_environment_ontology
subclass of: Erwinia spp.

green house study
type: Class
has definition: The treatment where the plants were grown under green house conditions. This may involve supplemantal treatments in addition to any standard conditions.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: study type

Xanthomonas oryzae pv. oryzicola
type: Class
has definition: The treatment involving exposure of plant to the pathogen Xanthomonas oryzae pv. oryzicola. It is a causal agent for rice bacterial blight disease.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:129394
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_129394
has related synonym: Xanthomonas campestris pv. oryzicola
has OBO namespace: plant_environment_ontology
subclass of: Xanthomonas oryzae

Recilia dorsalis
type: Class
has definition: The treatment involving exposure of plant to the pest zigzag leafhopper.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: zigzag leafhopper
has OBO namespace: plant_environment_ontology
subclass of: Hemiptera

Pseudomonas syringae pv. panici
type: Class
has definition: The treatment involving exposure of plant to the pathogen Pseudomonas syringae pv. panici. It is a causal agent for rice Bacterial Brown Stripe disease.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
has OBO namespace: plant_environment_ontology
subclass of: Pseudomonas spp.

Sogatella furcifera
type: Class
has definition: The treatment involving exposure of plant to the pest white-backed planthopper.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:113103
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_113103
has related synonym: white-backed planthopper
has OBO namespace: plant_environment_ontology
subclass of: Hemiptera

molybdenum nutrient regimen
type: Class
has definition: The treatment involving exposure of plant to micronutrient molybdenum as supplement to study various types of responses.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: micronutrient regimen

Pseudomonas avenae
type: Class
has definition: The treatment involving exposure of plant to the pathogen Pseudomonas avenae. It is a causal agent for rice Bacterial Brown Stripe disease
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:80867
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_80867
has related synonym: Acidovorax avenae
has OBO namespace: plant_environment_ontology
subclass of: Pseudomonas spp.

laboratory study
type: Class
has definition: Definition
  label: The treatment where the plants were grown under laboratory / open room conditions, with very few controlled parameters. This may involve supplemantal treatments in addition to any naturally occurring conditions.
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: study type

field study
type: Class
has definition: The treatment where the plants were grown under field conditions. This may involve supplemantal treatments in addition to any naturally occurring conditions.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: open field study
has OBO namespace: plant_environment_ontology
subclass of: study type

Xanthomonas oryzae pv. oryzae
type: Class
has definition: The treatment involving exposure of plant to the pathogen Xanthomonas oryzae pv. oryzae. It is a causal agent for rice bacterial blight disease.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:64187
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_64187
has related synonym: Xanthomonas campestris pv. oryza
has OBO namespace: plant_environment_ontology
subclass of: Xanthomonas oryzae

Oebalus pugnax
type: Class
has definition: The treatment involving exposure of plant to the pest rice stink bug
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: rice stink bug
has OBO namespace: plant_environment_ontology
subclass of: Hemiptera

soil water content
type: Class
has definition: The treatment involving an exposure to varying amounts of water in soil growth media.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: soil environment
subclass of: water environment

Diopsis macrophthalma
type: Class
has definition: The treatment involving exposure of plant to the pest commonly calles as rice stem borer.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: rice stem borer
has related synonym: stalked-eyed fly
has OBO namespace: plant_environment_ontology
subclass of: Diptera

copper nutrient regimen
type: Class
has definition: The treatment involving exposure of plant to micronutrient copper as supplement to study various types of responses.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: micronutrient regimen

solid growth media
type: Class
has definition: The treatment suggesting the use of solid growth media for growing the plants or tissue cultured samples.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: growth media

Maliarpha separatella
type: Class
has definition: The treatment involving exposure of plant to the pest white rice borer
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: African white stemborer
has related synonym: African whiteheads
has related synonym: white rice borer
has OBO namespace: plant_environment_ontology
subclass of: Lepidoptera

Sesamia inferens
type: Class
has definition: The treatment involving exposure of plant to the pest purple stem borer.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: pink stem borer
has related synonym: purple borer
has related synonym: purple stem borer
has OBO namespace: plant_environment_ontology
subclass of: Lepidoptera

liquid growth media
type: Class
has definition: The treatment involving use of liquid growth media for growing the plants, cell or tissue cultured samples.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: growth media

tissue culture growth media
type: Class
has definition: The treatment involving use of solid growth media for growing the plants or tissue cultured samples.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: solid growth media

benzothiadiazole regimen
type: Class
has definition: The treatment involving use of fungicide benzothiadiazole to study various types of responses on its application.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: fungicide regimen

fungicide regimen
type: Class
has definition: The treatment involving use of fungicides to study various types of responses on their application.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: pesticide regimen

growth chamber study
type: Class
has definition: The treatment involving study type in which plants were grown in growth chambers.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: study type

continuous dark (no light) regimen
type: Class
has definition: The treatment involving continuous exposure to darkness (no light) to the plant.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: continuous night regimen
has OBO namespace: plant_environment_ontology
subclass of: light quantity regimen

low light intensity regimen
type: Class
has OBO namespace: plant_environment_ontology
subclass of: light intensity regimen

Scirpophaga innotata
type: Class
has definition: The treatment involving exposure of plant to the pest Scirpophaga innotata
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: Tipanaea sericea
has related synonym: white rice stemborer
has related synonym: white stemborer
has OBO namespace: plant_environment_ontology
subclass of: Scirpophaga spp.

boron nutrient regimen
type: Class
has definition: The treatment involving exposure of plant to micronutrient boron as supplement to study various types of responses.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: micronutrient regimen

Scirpophaga incertulas
type: Class
has definition: The treatment involving exposure of plant to the pest Scirpophaga incertulas.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: yellow stem borer
has OBO namespace: plant_environment_ontology
has db xref: NCBI_taxid:72366
  type: DbXref
  has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_72366
subclass of: Scirpophaga spp.

Rupela albinella
type: Class
has definition: The treatment involving exposure of plant to the pest rice stemborer, Rupela albinella
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: rice stemborer
has OBO namespace: plant_environment_ontology
subclass of: Lepidoptera

cobalt nutrient regimen
type: Class
has definition: The treatment involving exposure of plant to cobalt as supplement to study various types of responses.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: other nutrient regimen

Chilo polychrysus
type: Class
has definition: The treatment involving exposure of plant to the pest dark-headed stemborer.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: dark-headed stemborer
has OBO namespace: plant_environment_ontology
subclass of: Chilo

oxygen regimen
type: Class
has definition: The treatment involving exposure of plant to oxygen to study various types of responses.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: non-mineral nutrient regimen

Chilo suppressalis
type: Class
has definition: The treatment involving exposure of plant to the pest rice striped stemborer.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:168631
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_168631
has related synonym: Asiatic rice borer
has related synonym: striped stemborer
has OBO namespace: plant_environment_ontology
subclass of: Chilo

unknown study type
type: Class
has definition: The treatment involving study type where nothing is known in the reported literature/study about the kind of growth facilities used.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: study type

obsolete environment term
type: Class
has definition: The treatment involving the terms that are no longer in use or were deleted are placed under this parent term.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: ObsoleteClass

standing water
type: Class
has definition: The treatment involving an exposure to standing water during a plant's life span. This also results in anaerobic soil conditions for a either long or short periods.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: water environment

Stenchaetothrips biformis
type: Class
has definition: The treatment involving exposure of plant to the pest commonly called as oriental rice thrips.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: oriental rice thrips
has related synonym: rice thrips
has OBO namespace: plant_environment_ontology
subclass of: Thysanoptera

nitrogen nutrient regimen
type: Class
has definition: The treatment involving exposure of plant to macronutrient nitrogen as supplement to study various types of responses.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: primary macronutrient

rainy season
type: Class
has definition: The treatment involving an exposure to the wet or the rainy season.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: monsoon season
has related synonym: wet season
has OBO namespace: plant_environment_ontology
has alternative id: EO:0007032
subclass of: seasonal environment

dry season
type: Class
has definition: The treatment involving an exposure to the dry season.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: seasonal environment

DBMIB regimen
type: Class
has definition: The treatment involving use of DBMIB. It blocks the oxidation of plastoquinol in the photosynthetic light reaction and keeps the plastoquinone pool reduced.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: 2,5-dibromo -6-isopropyl-3-methyl-1,4-benzoquinone
has OBO namespace: plant_environment_ontology
subclass of: herbicide regimen

magnesium nutrient regimen
type: Class
has definition: The treatment involving exposure of plant to macronutrient magnesium as supplement to study various types of responses.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: secondary macronutrient

Hydrellia philippina
type: Class
has definition: The treatment involving exposure of plant to the pest rice whorl maggot.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: rice whorl maggot
has OBO namespace: plant_environment_ontology
subclass of: Diptera

kinetin regimen
type: Class
has definition: The treatment involving use of kinetin, a cytokinin homolog to study various types of responses on its extrinsic and/or intrinsic application.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: cytokinin regimen

benzyladenine regimen
type: Class
comment: The treatment involving use of benzyladenine a cytokinin homolog to study various types of responses on its extrinsic and/or intrinsic application.
has definition: Definition
  label: It is a first-generation synthetic cytokinin which elicits plant growth and development responses, setting blossoms and stimulating fruit richness by stimulating cell division. It is an inhibitor of respiratory kinase in plants, and increases post-harvest life of green vegetables. [From http://en.wikipedia.org/wiki/6-Benzylaminopurine]
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[1214-39-7]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[1214-39-7]
  has db xref: web:http://en.wikipedia.org/wiki/6-Benzylaminopurine
    type: DbXref
    has URI: http://purl.org/obo/owl/web#web_http://en.wikipedia.org/wiki/6-Benzylaminopurine
has related synonym: 6-benzylaminopurine
has related synonym: BAP
has related synonym: Benzylaminopurine
has related synonym: N-(Phenylmethyl)-1H-purin-6-amine
has related synonym: N-benzyl-adenine
has related synonym: verdan senescence inhibitor
has OBO namespace: plant_environment_ontology
subclass of: cytokinin regimen

CCP
type: Class
has related synonym: carbonyl cyanide phenylhydrazone
has related synonym: carbonylcyanide-m-chlorophenylhydrazone
has OBO namespace: plant_environment_ontology
subclass of: herbicide regimen

potassium nutrient regimen
type: Class
has definition: The treatment involving exposure of plant to macronutrient potassium as supplement to study various types of responses.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: primary macronutrient

Pelopidas mathias
type: Class
has definition: The treatment involving exposure of plant to the pest Pelopidas mathias.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: black branded swift
has related synonym: lesser millet skipper
has related synonym: small branded swift
has OBO namespace: plant_environment_ontology
subclass of: Lepidoptera

sulfur nutrient regimen
type: Class
has definition: The treatment involving exposure of plant to macronutrient sulfur as supplement to study various types of responses.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: secondary macronutrient

Dicladispa armigera
type: Class
has definition: The treatment involving exposure of plant to the pest Dicladispa armigera.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:111238
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_111238
has related synonym: rice hispa
has OBO namespace: plant_environment_ontology
subclass of: Coleoptera

calcium nutrient regimen
type: Class
has definition: The treatment involving exposure of plant to macronutrient calcium as supplement to study various types of responses.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: secondary macronutrient

Sogatodes oryzicola
type: Class
has definition: The treatment involving exposure of plant to the pest rice delpahcid.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: Tagosodes orizicolus
has related synonym: rice delpahcid
has OBO namespace: plant_environment_ontology
subclass of: Hemiptera

Leptocorisa oratorius
type: Class
has definition: The treatment involving exposure of plant to the pest paddy bug.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: paddy bug
has related synonym: rice bug
has OBO namespace: plant_environment_ontology
subclass of: Hemiptera

T-DNA insert
type: Class
has definition: The treatment involving use of T-DNA in the flanking regions of a DNA insert for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: DNA

carbon nutrient regimen
type: Class
has definition: The treatment involving exposure of plant to carbon source as supplement to study various types of responses.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: non-mineral nutrient regimen

Marasmia patnalis
type: Class
has definition: The treatment involving exposure of plant to the pest Marasmia patnalis .
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: leaffolder
has OBO namespace: plant_environment_ontology
subclass of: Lepidoptera

Cnaphalocrocis medinalis
type: Class
has definition: The treatment involving exposure of plant to the pest Cnaphalocrocis medinalis.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: defloiator
has related synonym: leaffolder
has related synonym: rice leaffolder
has OBO namespace: plant_environment_ontology
subclass of: Lepidoptera

aluminum nutrient regimen
type: Class
has definition: The treatment involving exposure of plant to aluminium as supplement to study various types of responses.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: other nutrient regimen

transposable element insert
type: Class
has definition: The treatment involving use of transposable element as an insert for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: TE insert
has OBO namespace: plant_environment_ontology
subclass of: DNA

Nephotettix spp
type: Class
has definition: The treatment involving exposure of plant to the pest green leaf hopper.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:94399
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_94399
has related synonym: green leafhopper
has OBO namespace: plant_environment_ontology
subclass of: Hemiptera

zinc nutrient regimen
type: Class
has definition: The treatment involving exposure of plant to micronutrient zinc as supplement to study various types of responses.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: micronutrient regimen

Ac/Ds transposable element
type: Class
has definition: The treatment involving use of Ac/Ds transposable system for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: transposable element insert

Orseolia oryzae
type: Class
has definition: The treatment involving exposure of plant to the pest rice gall midge.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:33408
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_33408
has related synonym: Asian rice gall midge
has related synonym: gall midge
has OBO namespace: plant_environment_ontology
subclass of: Diptera

Tos-17 transposable element
type: Class
has definition: The use of Tos-17 transposable element for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: transposable element insert

Pseudaletia separata
type: Class
has definition: The treatment involving exposure of plant to the pest Pseudaletia separata
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: armyworm
has OBO namespace: plant_environment_ontology
has db xref: NCBI_taxid:7105
  type: DbXref
  has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_7105
subclass of: Pseudaletia spp.

Nymphula depunctalis
type: Class
has definition: The treatment involving exposure of plant to the pest rice caseworm
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: caseworm
has related synonym: rice caseworm
has OBO namespace: plant_environment_ontology
subclass of: Lepidoptera

zero gravity
type: Class
has definition: The treatment involving use of gravity factor to study various types of responses in the absence of gravity or space like conditions.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: gravity

physical environment
type: Class
has OBO namespace: plant_environment_ontology
subclass of: abiotic environment

Nilaparvata lugens
type: Class
has definition: The treatment involving exposure of plant to the pest brown planthopper
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:108931
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_108931
has related synonym: brown planthopper
has OBO namespace: plant_environment_ontology
subclass of: Hemiptera

rice yellow mottle virus
type: Class
has definition: The treatment involving exposure of plant to the rice yellow mottle virus. It is a causal agent for rice yellow mottle disease.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:31744
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_31744
has related synonym: RYMV
has OBO namespace: plant_environment_ontology
subclass of: ssRNA positive-strand virus with no DNA stage

warm/hot air temperature regimen
type: Class
has definition: The treatment involving an exposure to above optimal air temperature, which may depend on the study type or the regional environment.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: air temperature regimen
subclass of: warm/hot temperature regimen

Meloidogyne arenaria
type: Class
has definition: The treatment involving exposure of plant to the pest Meloidogyne oryzae. It is a causal agent for rice root knot nematode disease.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:6304
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_6304
has OBO namespace: plant_environment_ontology
subclass of: Meloidogyne spp.

Hirschmaniella spinicaudata
type: Class
has definition: The treatment involving exposure of plant to the pest Hirschmaniella spinicaudata. It is a causal agent for rice rice root nematode disease.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: Hirschmaniella spp.

Hirschmaniella oryzae
type: Class
has definition: The treatment involving exposure of plant to the pest Hirschmaniella oryzae. It is a causal agent for rice rice root nematode disease.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: Hirschmaniella spp.

Hirschmaniella mucronata
type: Class
has definition: The treatment involving exposure of plant to the pest Hirschmaniella mucronata. It is a causal agent for rice rice root nematode disease.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: Hirschmaniella spp.

Hirschmaniella imamuri
type: Class
has definition: The treatment involving exposure of plant to the pest Hirschmaniella imamuri. It is a causal agent for rice rice root nematode disease.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: rice root nematode
has OBO namespace: plant_environment_ontology
subclass of: Hirschmaniella spp.

Hirschmaniella caudacrena
type: Class
has definition: The treatment involving exposure of plant to the pest Hirschmaniella imamuri. It is a causal agent for rice rice root nematode disease.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: Hirschmaniella spp.

mycoplasma like organism
type: Class
has definition: The treatment involving exposure of plant to the pest mycoplasma like organism.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: MLO
has OBO namespace: plant_environment_ontology
subclass of: Mycoplasma

Mycovellosiella oryzae
type: Class
has definition: The treatment involving exposure of plant to the pathogen Mycovellosiella oryzae. It is a causal agent for rice White Leaf Streak Disease.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
has related synonym: Ramularia oryzae
has OBO namespace: plant_environment_ontology
subclass of: Ascomycota

Pythium spp.
type: Class
has definition: The treatment involving exposure of plant to the heterokont Pythium.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:4797
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_4797
has OBO namespace: plant_environment_ontology
subclass of: Stramenopiles

Spodoptera praefica
type: Class
has definition: The treatment involving exposure of plant to the pest commonly called as western yellowstriped armyworm.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: western yellowstriped armyworm
has OBO namespace: plant_environment_ontology
subclass of: Spodoptera spp.

Spodoptera mauritia
type: Class
has definition: The treatment involving exposure of plant to the pest commonly calles as lawn armyworm.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: Prodenia acronyctoides
has related synonym: lawn armyworm
has OBO namespace: plant_environment_ontology
subclass of: Spodoptera spp.

Pseudaletia unipuncta
type: Class
has definition: The treatment involving exposure of plant to the pest Pseudaletia unipuncta
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: armyworm
has OBO namespace: plant_environment_ontology
has db xref: NCBI_taxid:42880
  type: DbXref
  has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_42880
subclass of: Pseudaletia spp.

cold air temperature regimen
type: Class
has definition: The treatment involving an exposure to cold or sub-optimal air temperature, which may depend on the study type or the regional environment.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: air temperature regimen
subclass of: cold temperature regimen

Insecta
type: Class
has definition: The treatment involving exposure of plant to the pests.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:50557
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_50557
has related synonym: insect
has related synonym: true insects
has OBO namespace: plant_environment_ontology
subclass of: Metazoa

Pomacea canaliculata
type: Class
has definition: The treatment involving exposure of plant to the pest Pomacea canaliculata
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: apple snail
has related synonym: golden apple snail
has OBO namespace: plant_environment_ontology
subclass of: Mollusca

Mollusca
type: Class
has definition: The treatment involving exposure of plant to the pest molluscs.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:6447
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_6447
has related synonym: mollusc
has related synonym: mollusk
has OBO namespace: plant_environment_ontology
subclass of: Metazoa

Ditylenchus angustus
type: Class
has definition: The treatment involving exposure of plant to the pest Ditylenchus angustus. It is a causal agent for rice Ufra disease.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
has related synonym: rice stem nematode
has related synonym: ufra nematode
has OBO namespace: plant_environment_ontology
subclass of: Nematoda

Nematoda
type: Class
has definition: The treatment involving exposure of plant to the nematode pests.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:6231
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_6231
has related synonym: round worm
has related synonym: roundworm
has OBO namespace: plant_environment_ontology
subclass of: Metazoa

cold water temperature regimen
type: Class
has definition: The treatment involving an exposure to cold or sub-optimal water temperature, which may depend on the study type or the regional environment.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: water temperature regimen
subclass of: cold temperature regimen

rice tungro spherical virus
type: Class
has definition: The treatment involving exposure of plant to the rice tungro spherical virus. It is a causal agent for rice tungro disease, which is also called as Mentek or Waika diease.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:35287
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_35287
has related synonym: RTSV
has related synonym: rice leaf yellowing virus
has related synonym: rice penyakit mentek virus
has related synonym: rice tungro spherical waikavirus
has related synonym: rice waika virus
has related synonym: rice yellow leaf virus
has related synonym: tungro virus
has OBO namespace: plant_environment_ontology
subclass of: ssRNA positive-strand virus with no DNA stage

Achlya conspicua
type: Class
has definition: The treatment involving exposure of plant to the heterokont Achlya conspicua. It is a causal agent for rice water mold diease which is also called as seed rot or seedling damping-off disease.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:112027
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_112027
has OBO namespace: plant_environment_ontology
subclass of: Achlya spp.

Fusarium
type: Class
has definition: The treatment involving exposure of plant to the pathogenic Fusarium spp. It is a causal agent for rice Water Mold disease also called as Seed Rot Disease or Seedling Damping-off Disease.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:5506
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_5506
has related synonym: Fusarium spp.
has OBO namespace: plant_environment_ontology
has alternative id: EO:0007301
subclass of: Gibberella spp.

Achlya klebsiana
type: Class
has definition: The treatment involving exposure of plant to the heterokont Achlya klebsiana. It is a causal agent for rice water mold diease which is also called as seed rot or seedling damping-off disease.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:4767
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_4767
has OBO namespace: plant_environment_ontology
subclass of: Achlya spp.

Bovinae
type: Class
has definition: The treatment involving exposure of plant to the cattle.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:27592
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_27592
has related synonym: cattle
has OBO namespace: plant_environment_ontology
subclass of: Mammalia

rice tungro bacilliform virus
type: Class
has definition: The treatment involving exposure of plant to the rice tungro bacilliform virus. It is a causal agent for rice tungra disease which is also called as Mentek or Waika disease.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:10654
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_10654
has related synonym: RTBV
has related synonym: rice yellow orange leaf virus
has OBO namespace: plant_environment_ontology
subclass of: retroid virus

Rodentia
type: Class
has definition: The treatment involving exposure of plant to the pest rats and mouse.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:9989
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_9989
has related synonym: mouse
has related synonym: rat
has related synonym: rodent
has OBO namespace: plant_environment_ontology
subclass of: Mammalia

rice yellow stunt virus
type: Class
has definition: The treatment involving exposure of plant to the rice yellow stunt virus. It is a causal agent for rice transitory yellowing disease.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:59380
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_59380
has related synonym: RTYV
has related synonym: RYSV
has related synonym: rice transitory yellowing virus
has related synonym: rice yellow stunt rhabdovirus
has OBO namespace: plant_environment_ontology
subclass of: ssRNA negative-strand virus

Aves
type: Class
has definition: The treatment involving exposure of plants to the birds.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:8782
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_8782
has related synonym: bird
has OBO namespace: plant_environment_ontology
subclass of: Metazoa

rice stripe necrosis virus
type: Class
has definition: The treatment involving exposure of plant to the rice stripe necrosis virus. It is a causal agent for rice stripe necrosis disease.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
has related synonym: RSNV
has OBO namespace: plant_environment_ontology
subclass of: ssRNA positive-strand virus with no DNA stage

Metazoa
type: Class
has definition: The treatment involving exposure of plant to the pests and weeds of higher order.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:33208
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_33208
has related synonym: Animalia
has OBO namespace: plant_environment_ontology
subclass of: pest/pathogen/animal/plant environment

rice stripe virus
type: Class
has definition: The treatment involving exposure of plant to the rice stripe virus. It is a causal agent for rice stripe disease.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:12331
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_12331
has related synonym: RSV
has OBO namespace: plant_environment_ontology
subclass of: ssRNA negative-strand virus

genetic background
type: Class
has definition: OBSOLETE.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: ObsoleteClass

germplasm
type: Class
has definition: OBSOLETE.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: ObsoleteClass

genotype
type: Class
has definition: OBSOLETE.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: ObsoleteClass

rice hoja blanca virus
type: Class
has definition: The treatment involving exposure of plant to the rice hoja blanca virus. It is a causal agent for rice hoja blanca disease.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:12332
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_12332
has related synonym: hoja blanca
has related synonym: rice hoja blanca tenuivirus
has OBO namespace: plant_environment_ontology
subclass of: ssRNA negative-strand virus

biotic environment
type: Class
has definition: The treatment involving an exposure to the biotic/biological factors such as pest, pathogens, plants, etc.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: plant environment ontology

rice grassy stunt virus
type: Class
has definition: The treatment involving exposure of plant to the rice grassy stunt virus. It is a causal agent for rice grassy stunt disease.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:66266
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_66266
has related synonym: RGSV
has OBO namespace: plant_environment_ontology
subclass of: ssRNA negative-strand virus

plant environment ontology
type: Class
has definition: Definition
  label: A set of standardized controlled vocabularies to describe various types of treatments given to an individual plant / a population or a cultured tissue and/or cell type sample to evaluate the response on its exposure. It also includes the study types, where the terms can be used to identify the growth study facility. Each growth facility such as field study, growth chamber, green house etc is a environment on its own it may also involve instances of biotic and abiotic environments as supplemental treatments used in these studies.
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: plant treatment ontology
has related synonym: treatment ontology
has OBO namespace: plant_environment_ontology

barley yellow dwarf virus
type: Class
has definition: The treatment involving exposure of plant to the barley yellow dwarf virus. It is a causal agent for rice Giallume disease.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:12037
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_12037
has related synonym: BYDV
has OBO namespace: plant_environment_ontology
subclass of: ssRNA positive-strand virus with no DNA stage

rice gall dwarf virus
type: Class
has definition: The treatment involving exposure of plant to the rice gall dwarf virus. It is a causal agent for rice gall dwarf disease.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
has related synonym: RGDV
has related synonym: rice gall dwarf virus RGDV
has OBO namespace: plant_environment_ontology
subclass of: dsRNA virus

Balansia oryzae-sativae
type: Class
has definition: Definition
  label: The treatment involving exposure of plant to the pathogen Balansia oryzae-sativae. It is a causal agent for rice Udbatta diesase which is also called as Black Choke Disease, False Ergot Disease, Incense Rod Disease.
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:116609
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_116609
has related synonym: Ephelis japonica
has related synonym: Ephelis oryzae
has OBO namespace: plant_environment_ontology
subclass of: Ascomycota

Magnaporthe salvinii
type: Class
has definition: The treatment involving exposure of plant to the pathogen Magnaporthe salvinii. It is a causal agent for rice stem rot disease and Seedling Blight (Fungal) Disease.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:165778
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_165778
has related synonym: Helminthosporium sigmoideum
has related synonym: Helminthosporium sigmoideum var.irregulare.
has related synonym: Leptosphaeria salvinii
has related synonym: Nakataea sigmoidae
has related synonym: Sclerotium oryzae
has OBO namespace: plant_environment_ontology
has alternative id: EO:0007213
subclass of: Magnaporthe spp.

Rhizoctonia oryzae
type: Class
has definition: Definition
  label: The treatment involving exposure of plant to the pathogen Rhizoctonia oryzae. It is a causal agent for rice Sheath Spot disease such as Bordered Sheath Spot Disease, Red Sclerotial Disease and Rhizoctonia Sheath Spot Disease.
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:63190
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_63190
has related synonym: Rhizoctonia zeae
has related synonym: Waitea circinata
has OBO namespace: plant_environment_ontology
subclass of: Basidiomycota

rice dwarf virus
type: Class
has definition: The treatment involving exposure of plant to the pathogen rice dwarf virus. It is a causal agent for rice dwarf phytoreo virus disease.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:10991
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_10991
has related synonym: RDV
has related synonym: rice dwarf phytoreovirus
has related synonym: rice dwarf phytoreovirus RDV
has OBO namespace: plant_environment_ontology
has db xref: NCBI_taxid:10991
  type: DbXref
  has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_10991
subclass of: dsRNA virus

rice black streak dwarf virus
type: Class
has definition: The treatment involving exposure of plant to the pathogen rice black streak dwarf virus. It is a causal agent for rice blast steak dwarf disease.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:10990
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_10990
has related synonym: RBSDV
has related synonym: Rice black streak virus
has related synonym: Rice black-streaked dwarf virus
has related synonym: rice black-streaked dwarf fijivirus
has related synonym: rice black-streaked dwarf virus RBSDV
has OBO namespace: plant_environment_ontology
subclass of: dsRNA virus

Aphelenchoides besseyi
type: Class
has definition: The treatment involving exposure of plant to the pest Aphelenchoides besseyi. It is a causal agent for rice white tip nematode disease.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: rice white-tip nematode
has OBO namespace: plant_environment_ontology
subclass of: Nematoda

warm/hot water temperature regimen
type: Class
has definition: The treatment involving an exposure to above optimal water temperature, which may depend on the study type or the regional environment.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: water temperature regimen
subclass of: warm/hot temperature regimen

Meloidogyne salasi
type: Class
has definition: The treatment involving exposure of plant to the pest Meloidogyne salasi. It is a causal agent for rice root knot nematode disease.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: Meloidogyne spp.

Meloidogyne oryzae
type: Class
has definition: The treatment involving exposure of plant to the pest Meloidogyne oryzae. It is a causal agent for rice root knot nematode disease.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: Meloidogyne spp.

Meloidogyne javanica
type: Class
has definition: The treatment involving exposure of plant to the pest Meloidogyne oryzae. It is a causal agent for rice root knot nematode disease.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:6303
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_6303
has related synonym: root-knot nematode
has OBO namespace: plant_environment_ontology
subclass of: Meloidogyne spp.

Meloidogyne incognita
type: Class
has definition: The treatment involving exposure of plant to the pest Meloidogyne oryzae. It is a causal agent for rice root knot nematode disease.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:6306
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_6306
has related synonym: southern root-knot nematode
has OBO namespace: plant_environment_ontology
subclass of: Meloidogyne spp.

mechanical damage
type: Class
has related synonym: wound
has related synonym: wound treatment
has related synonym: wounding
has OBO namespace: plant_environment_ontology
subclass of: physical environment

Cylindrocladium scoparium
type: Class
has definition: The treatment involving exposure of plant to the pathogen Cylindrocladium scoparium. It is a causal agent for rice Sheath Net Blotch Disease.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:40624
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_40624
has related synonym: Calonectria morganii
has OBO namespace: plant_environment_ontology
subclass of: Ascomycota

Meloidogyne graminicola
type: Class
has definition: The treatment involving exposure of plant to the pest Meloidogyne oryzae. It is a causal agent for rice root knot nematode disease.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:189291
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_189291
has OBO namespace: plant_environment_ontology
subclass of: Meloidogyne spp.

Pyrenochaeta oryzae
type: Class
has definition: The treatment involving exposure of plant to the pathogen Pyrenochaeta oryzae. It is a causal agent for rice Sheath Blotch Disease.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
has OBO namespace: plant_environment_ontology
subclass of: Ascomycota

Athelia rolfsii
type: Class
has definition: The treatment involving exposure of plant to the pathogen Athelia rolfsii. It is a causal agent for rice Seedling Blight (Fungal) disease.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:109385
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_109385
has related synonym: Sclerotium rolfsii
has OBO namespace: plant_environment_ontology
subclass of: Basidiomycota

Sarocladium oryzae
type: Class
has definition: The treatment involving exposure of plant to the pathogen Sarocladium oryzae. It is a causal agent for rice Seedling Blight (Fungal) disease and/or Sheath Rot disease.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
has related synonym: Acrocylindrium oryzae
has OBO namespace: plant_environment_ontology
subclass of: Fungi

Thanatephorus cucumeris
type: Class
has definition: Definition
  label: The treatment involving exposure of plant to the pathogen Thanatephorus cucumeris. It is a causal agent for rice Sheath Blight diseases such as Brown-bordered Leaf and Sheath Spot disease and/or Oriental Leaf and Sheath Blight disease
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:107832
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_107832
has related synonym: Rhizoctonia praticola
has related synonym: Rhizoctonia solani
has related synonym: Thanatephorus praticola
has related synonym: black scurf of potato
has OBO namespace: plant_environment_ontology
subclass of: Basidiomycota

cytoplasmic genetic background
type: Class
has definition: OBSOLETE.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: ObsoleteClass

nuclear genetic background
type: Class
has definition: OBSOLETE.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: ObsoleteClass

wind environment
type: Class
has definition: The treatment involving an exposure to wind, which may depend on regional environment.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: ecological environment
subclass of: physical environment

watering regimen
type: Class
has definition: The treatment involving an exposure to watering frequencies.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: water environment

freezing air temperature regimen
type: Class
has definition: The treatment involving an exposure to frost or freezing air temperature, which may depend on the study type or the regional environment. This temperature is either below or around 4C.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: cold air temperature regimen

irrigated land region
type: Class
has definition: The treatment to plants or the populations grown in the regions where the land is leveled, may have bunded fields with water control, shallow. For rice flooded with anaoerobic soil during crop growth.
  type: Definition
  has db xref: IRIS:SES
    type: DbXref
    has URI: http://purl.org/obo/owl/IRIS#IRIS_SES
has OBO namespace: plant_environment_ontology
subclass of: ecological environment

Gerlachia oryzae
type: Class
has definition: The treatment involving exposure of plant to the pathogen Gerlachia oryzae. It is a causal agent for a form of rice Seedling Blight (Fungal) disease.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:87749
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_87749
has related synonym: Monographella albescens
has related synonym: rice leaf scald
has OBO namespace: plant_environment_ontology
subclass of: Ascomycota

manganese nutrient regimen
type: Class
has definition: The treatment involving exposure of plant to micronutrient manganese as supplement to study various types of responses.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: micronutrient regimen

Alternaria padwickii
type: Class
has definition: Definition
  label: The treatment involving exposure of plant to the pathogen Alternaria padwickii. It is a causal agent for rice seedling blight (fungal) disease and/or stackburn disease also called as Alternaria Leaf Spot Disease.
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
has related synonym: Trichoconis padwickii
has OBO namespace: plant_environment_ontology
subclass of: Alternaria spp.

Gibberella zeae
type: Class
has definition: The treatment involving exposure of plant to the pathogen Gibberella zeae. It is a causal agent for rice Scab disease.
  type: Definition
  has db xref: GR:ivy
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_ivy
  has db xref: NCBI_taxid:5518
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_5518
has related synonym: Fusarium graminearum
has OBO namespace: plant_environment_ontology
subclass of: Gibberella spp.

lowland region
type: Class
has definition: Definition
  label: The treatment involving the plant or the populations grown in regions where the land level is slightly steep, noncontinuous flooding of variable depth and duration. Alternatingconditions of aerobic to anaerobic soil.
  has db xref: IRIS:SES
    type: DbXref
    has URI: http://purl.org/obo/owl/IRIS#IRIS_SES
has related synonym: rainfed lowland region
has OBO namespace: plant_environment_ontology
has alternative id: EO:0007390
subclass of: ecological environment

upland region
type: Class
has definition: The treatment involving the plant or the populations grown in regions where the land level is steep, rarely flodded and has aerobic soil.
  type: Definition
  has db xref: IRIS:SES
    type: DbXref
    has URI: http://purl.org/obo/owl/IRIS#IRIS_SES
has OBO namespace: plant_environment_ontology
subclass of: ecological environment

sub-sahara region
type: Class
has definition: OBSOLETE.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: ObsoleteClass

desert like region
type: Class
has definition: The treatment involving an exposure to the conditions found in a type of biome characterized by low moisture levels and infrequent and unpredictable precipitation of rainfall.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: ecological environment

river delta region
type: Class
has OBO namespace: plant_environment_ontology
subclass of: flood prone region

flood prone region
type: Class
has definition: Definition
  label: A treatment in terms of plant's exposure to the regional conditions found in the vicinity of the water bodies like, sea, river, lake etc. Growth conditions may include aerobic to anaerobic soil, salinity or toxicity in tidal areas. Treatment may include standing or flash flooding.
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: deep water
has related synonym: flooding
has OBO namespace: plant_environment_ontology
subclass of: ecological environment

phosphorus nutrient regimen
type: Class
has definition: The treatment involving exposure of plant to macronutrient phosphorus as supplement to study various types of responses.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: primary macronutrient

sub-tropical region
type: Class
has definition: Definition
  label: The treatment involving the plant or the populations grown in regions that are adjacent to the tropics, usually roughly defined as the ranges 25-40 N and 25-40 S latitude. These areas typically have hot tropical summers, but non-tropical winters.
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: ecological environment

freezing water temperature regimen
type: Class
has definition: The treatment involving an exposure to frost or freezing water temperature, which may depend on the study type or the regional environment. This temperature is either below or around 4C.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: cold water temperature regimen

arid region
type: Class
has definition: The treatment involving the plant or the populations grown in regions where the land is excessively dry and receives insufficient rainfall to support agriculture.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: desert like region

semiarid region
type: Class
has definition: The treatment involving the plant or the populations grown in regions where the total annual rainfall received in in the range of 25-50cm (10-20inches).
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: ecological environment

fungal elicitor
type: Class
has OBO namespace: plant_environment_ontology
subclass of: chemical regimen

unknown environment
type: Class
has OBO namespace: plant_environment_ontology
subclass of: plant environment ontology

drought environment
type: Class
has OBO namespace: plant_environment_ontology
subclass of: water environment

Hoagland solution
type: Class
has OBO namespace: plant_environment_ontology
subclass of: hydroponic plant culture media

nitrate regimen
type: Class
has OBO namespace: plant_environment_ontology
subclass of: nitrogen fertilizer regimen

methyl jasmonate
type: Class
has OBO namespace: plant_environment_ontology
subclass of: chemical regimen

5-methyltryptophan
type: Class
has OBO namespace: plant_environment_ontology
subclass of: chemical regimen

brassinosteroid
type: Class
has OBO namespace: plant_environment_ontology
subclass of: growth hormone regimen

cerebroside elicitor
type: Class
has OBO namespace: plant_environment_ontology
subclass of: fungal elicitor

Pseudomonas fluorescens
type: Class
has related synonym: Bacillus fluorescens
has related synonym: Bacillus fluorescens liquefaciens
has related synonym: Bacterium fluorescen
has related synonym: Liquidomonas fluorescens
has OBO namespace: plant_environment_ontology
has db xref: NCBI_taxid:294
  type: DbXref
  has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_294
subclass of: Pseudomonas spp.

zinc sulphate regimen
type: Class
has definition: The treatment involving exposure of plant to micronutrient zinc by adding ZnSO4 as supplement to study various types of responses.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: ZnSO4
has OBO namespace: plant_environment_ontology
subclass of: zinc nutrient regimen

manganese sulfate regimen
type: Class
has definition: The treatment involving exposure of plant to micronutrient manganese by adding MnSO4 supplement to study various types of responses.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: MnSO4
has OBO namespace: plant_environment_ontology
subclass of: manganese nutrient regimen

peroxide regimen
type: Class
has definition: The treatment involving exposure of plant to a peroxide to study various types of oxidative stress responses.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: chemical regimen

hydrogen peroxide
type: Class
has definition: The treatment involving exposure of plant to H2O2 to study various types of oxidative stress responses.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: peroxide regimen

1,2-dibromoethane
type: Class
has definition: The treatment involving use of 1,2-dibromoethane for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[106-93-4]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[106-93-4]
has related synonym: DBE
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

1,2-dichloroethane
type: Class
has definition: The treatment involving use of 1,2-dichloroethane for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[107-06-2]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[107-06-2]
has related synonym: DCE
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

1,2:5,6-dibenzanthracene
type: Class
has definition: The treatment involving use of 1,2:5,6-dibenzanthracene for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[53-70-3]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[53-70-3]
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

1,4-dimethanesulfonoxy-1:4-dimethylbutane
type: Class
has definition: The treatment involving use of 1,4-dimethanesulfonoxy-1:4-dimethylbutane for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[2514-83-2]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[2514-83-2]
has related synonym: CB2348
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

1,4-dimethanesulfonoxybut-2-yne
type: Class
has definition: The treatment involving use of 1,4-dimethanesulfonoxybut-2-yne for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[2917-96-6]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[2917-96-6]
has related synonym: CB2058
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

1,4-dimethanesulfonoxybutane
type: Class
has definition: The treatment involving use of 1,4-dimethanesulfonoxybutane for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[55-98-1]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[55-98-1]
has related synonym: CB2041
has related synonym: busulfan
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

1,6-dimethylsulfonoxy D-mannitol
type: Class
has definition: The treatment involving use of 1,6-dimethylsulfonoxy D-mannitol for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[1187-00-4]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[1187-00-4]
has related synonym: CB2511
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

1,6-dimethylsulfonoxy L-mannitol
type: Class
has definition: The treatment involving use of 1,6-dimethylsulfonoxy L-mannitol for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[2514-83-2]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[2514-83-2]
has related synonym: CB2628
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

1-amino-2-naphthol-4-sulfonic acid
type: Class
has definition: The treatment involving use of 1-amino-2-naphthol-4-sulfonic acid for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[116-63-2]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[116-63-2]
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

1-bromo-2-chloroethane
type: Class
has definition: The treatment involving use of 1-bromo-2-chloroethane for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[107-04-0]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[107-04-0]
has related synonym: BCE
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

1-diethylaminoethylethylamino-4-methyl-thioxanthenone
type: Class
has definition: The treatment involving use of 1-diethylaminoethylethylamino-4-methyl-thioxanthenone for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[479-50-5]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[479-50-5]
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

2,5,-bisethylene-imine-1,4-benzoquinone
type: Class
has definition: The treatment involving use of 2,5,-bisethylene-imine-1,4-benzoquinone for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[526-62-5]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[526-62-5]
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

2-chloroethyl methanesulfonate
type: Class
has definition: The treatment involving use of 2-chloroethyl methanesulfonate for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[3570-58-9]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[3570-58-9]
has related synonym: CB1506
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

2-fluoroethyl methanesulfonate
type: Class
has definition: The treatment involving use of 2-fluoroethyl methanesulfonate for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[461-31-4]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[461-31-4]
has related synonym: CB1522
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

2-methoxyethanol
type: Class
has definition: The treatment involving use of 2-methoxyethanol for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[109-86-4]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[109-86-4]
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

5-bromouracil
type: Class
has definition: The treatment involving use of 5-bromouracil for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[51-20-7]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[51-20-7]
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

5-bromouridine
type: Class
has definition: The treatment involving use of 5-bromouridine for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[957-75-5]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[957-75-5]
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

7-bromomethyl 12 methyl benz or agr/anthracine
type: Class
has definition: The treatment involving use of 7-bromomethyl 12 methyl benz or agr/anthracine for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[16238-56-5]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[16238-56-5]
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

actinomycin D
type: Class
has definition: The treatment involving use of actinomycin D for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[50-76-0]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[50-76-0]
has OBO namespace: plant_environment_ontology
subclass of: antibiotic regimen
subclass of: chemical mutagen

aminopterin
type: Class
has definition: The treatment involving use of aminopterin for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[54-62-6]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[54-62-6]
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

benzo (or agr)pyrene
type: Class
has definition: The treatment involving use of benzo (or agr)pyrene for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[50-32-8]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[50-32-8]
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

caffeine
type: Class
has definition: The treatment involving use of caffeine for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[58-08-2]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[58-08-2]
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

cisplatin
type: Class
has definition: The treatment involving use of cisplatin for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[15663-27-1]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[15663-27-1]
has related synonym: cis-dichlorodiammineplatinum(II)
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

colchicine
type: Class
has definition: The treatment involving use of colchicine for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[64-86-8]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[64-86-8]
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

cupric sulfate
type: Class
has definition: The treatment involving use of cupric sulfate for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[7758-98-7]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[7758-98-7]
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

diepoxybutane
type: Class
has definition: The treatment involving use of diepoxybutane for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[1464-53-5]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[1464-53-5]
has related synonym: DEB
has related synonym: erythritol anhydride
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

diepoxyoctane
type: Class
has definition: The treatment involving use of diepoxyoctane for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[2426-07-5]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[2426-07-5]
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

diethyl sulfate
type: Class
has definition: The treatment involving use of diethyl sulfate for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[64-67-5]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[64-67-5]
has related synonym: DES
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

dimethyl sulfoxide
type: Class
has definition: The treatment involving use of dimthyl sulfate for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[67-68-5]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[67-68-5]
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

DNA
type: Class
has definition: The treatment involving use of DNA fragment insertion or deletion as part of mutagenesis.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[9007-49-2]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[9007-49-2]
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

ethyl ether
type: Class
has definition: The treatment involving use of ethyl ether for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[60-29-7]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[60-29-7]
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

ethyl methanesulfonate
type: Class
has definition: The treatment involving use of EMS as a mutagen by damaging DNA and is used experimentally for that effect.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[62-50-0]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[62-50-0]
has related synonym: CB1528
has related synonym: EMS
has related synonym: Methanesulfonic acid ethyl ester
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

ethyl nitrosourea
type: Class
has definition: The treatment involving use of ethyl nitrosourea for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[759-73-9]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[759-73-9]
has related synonym: ENU
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

ethylene oxide
type: Class
has definition: The treatment involving use of ethylene oxide for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

ethylenimine
type: Class
has definition: The treatment involving use of ethylenimine for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[151-56-4]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[151-56-4]
has related synonym: EI
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

fagaronine
type: Class
has definition: The treatment involving use of fagaronine for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

formaldehyde
type: Class
has definition: The treatment involving use of formaldehyde for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[50-00-0]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[50-00-0]
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

boric acid
type: Class
has definition: The treatment involving use of boric acid for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: H3BO3
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

hesperidine
type: Class
has definition: The treatment involving use of hesperidine for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[520-26-3]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[520-26-3]
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

hexamethylmelamine
type: Class
has definition: The treatment involving use of hexamethylmelamine for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[645-05-6]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[645-05-6]
has related synonym: HMM
has related synonym: altretamine
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

hexamethylphosphoramide
type: Class
has definition: The treatment involving use of hexamethylphosphoramide for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[680-31-9]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[680-31-9]
has related synonym: HMPA
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

hycanthon methanesulfonate
type: Class
has definition: The treatment involving use of hycanthon methanesulfonate for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[23255-93-8]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[23255-93-8]
has related synonym: HMS
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

ICR 100
type: Class
has definition: The treatment involving use of ICR 100 for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[4213-45-0]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[4213-45-0]
has related synonym: 2-methoxy-6-[3-(ethyl-2-chloroethyl)aminopropylamino]acridine
has related synonym: quinacrine mustard
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

ICR 170
type: Class
has definition: The treatment involving use of ICR 170 for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[146-59-8]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[146-59-8]
has related synonym: 2-methoxy-6-dichloro-9-(3-ethyl-2-chloroethyl-aminopropylamino)acridine-dihydrochloride
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

iodine
type: Class
has definition: The treatment involving use of iodine for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[7553-56-2]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[7553-56-2]
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

Janus green B
type: Class
has definition: The treatment involving use of Janus green B for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[2869-83-2]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[2869-83-2]
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

methoxy diethylnitrosamine
type: Class
has definition: The treatment involving use of methoxy diethylnitrosamine for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

methyl methanesulfonate
type: Class
has definition: The treatment involving use of methyl methanesulfonate for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[66-27-3]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[66-27-3]
has related synonym: CB1540
has related synonym: MMS
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

mitomycin C
type: Class
has definition: The treatment involving use of mitomycin C for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[50-07-7]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[50-07-7]
has OBO namespace: plant_environment_ontology
subclass of: antibiotic regimen
subclass of: chemical mutagen

mustard gas
type: Class
has definition: The treatment involving use of mustard gas for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[505-60-2]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[505-60-2]
has related synonym: 1,1'-thiobis[2-chloroethane
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

N-methyl-N'-nitro-N-nitrosoguanidine
type: Class
has definition: The treatment involving use of N-methyl-N'-nitro-N-nitrosoguanidine for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[70-25-7]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[70-25-7]
has related synonym: MNNG
has related synonym: NNG
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

N-nitrosodimethylamine
type: Class
has definition: The treatment involving use of N-nitrosodimethylamine for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[62-75-9]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[62-75-9]
has related synonym: DMN
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

natural gas
type: Class
has definition: The treatment involving use of natural gas for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

nitrogen mustard
type: Class
has definition: The treatment involving use of nitrogen mustard for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[51-75-2]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[51-75-2]
has related synonym: 2-chloro-N-(2-chloroethyl)-N-methylethanamine
has related synonym: CB1414
has related synonym: HN2
has related synonym: mechlorethamine
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

nitrosomethyl urea
type: Class
has definition: The treatment involving use of nitrosomethyl urea for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[684-93-5]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[684-93-5]
has related synonym: MNU
has related synonym: N-methyl-N-nitrosourea
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

p-N,N-di(2-chloroethyl)aminophenylvaleric acid
type: Class
has definition: The treatment involving use of p-N,N-di(2-chloroethyl)aminophenylvaleric acid for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[64508-90-3]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[64508-90-3]
has related synonym: CB1356
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

p-N,N-di-(2-chloroethyl)amino-D-phenylalanine
type: Class
has definition: The treatment involving use of p-N,N-di-(2-chloroethyl)amino-D-phenylalanine for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[13045-94-8]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[13045-94-8]
has related synonym: CB3026
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

p-N,N-di-(2-chloroethyl)amino-DL-phenylalanine
type: Class
has definition: The treatment involving use of p-N,N-di-(2-chloroethyl)amino-DL-phenylalanine for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[148-82-3]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[148-82-3]
has related synonym: CB3007
has related synonym: melphalan
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

p-N,N-di-(2-chloroethyl)amino-L-phenylalanine
type: Class
has definition: The treatment involving use of p-N,N-di-(2-chloroethyl)amino-L-phenylalanine for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: CB3025
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

p-N,N-di-(2-chloroethyl)aminophenylbutyric acid
type: Class
has definition: The treatment involving use of p-N,N-di-(2-chloroethyl)aminophenylbutyric acid for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[305-03-3]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[305-03-3]
has related synonym: CB1348
has related synonym: chlorambucil
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

p-N,N-di-(2-chloroethyl)aminophenylethylamine
type: Class
has definition: The treatment involving use of p-N,N-di-(2-chloroethyl)aminophenylethylamine for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[58880-18-5]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[58880-18-5]
has related synonym: CB3034
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

p-p'-N,N-di(2-chloroethyl)aminophenoxyphenylalanine
type: Class
has definition: The treatment involving use of p-p'-N,N-di(2-chloroethyl)aminophenoxyphenylalanine for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[857-95-4]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[857-95-4]
has related synonym: CB3051
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

quinhydrone
type: Class
has definition: The treatment involving use of quinhydrone for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[106-34-3]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[106-34-3]
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

S-2-chloroethylcysteine
type: Class
has definition: The treatment involving use of S-2-chloroethylcysteine for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[28361-96-8]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[28361-96-8]
has related synonym: CB1592
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

sodium bisulfite
type: Class
has definition: The treatment involving use of sodium bisulfite for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[7631-90-5]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[7631-90-5]
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

sodium fluoride
type: Class
has definition: The treatment involving use of sodium fluoride for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[7681-49-4]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[7681-49-4]
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

styryl quinoline
type: Class
has definition: The treatment involving use of styryl quinoline for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has related synonym: CB3086
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

sulfur mustard
type: Class
has definition: The treatment involving use of sulfur mustard for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[505-60-2]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[505-60-2]
has related synonym: CB1735
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

triaziquone
type: Class
has definition: The treatment involving use of triaziquone for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[68-76-8]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[68-76-8]
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

triethylenemelamine
type: Class
has definition: The treatment involving use of triethylenemelamine for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[51-18-3]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[51-18-3]
has related synonym: CB1246
has related synonym: TEM
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

urethane
type: Class
has definition: The treatment involving use of urethane for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[51-79-6]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[51-79-6]
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

vinyl carbamate
type: Class
has definition: The treatment involving use of vinyl carbamate for mutagenesis process.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: CAS:[15805-73-9]
    type: DbXref
    has URI: http://purl.org/obo/owl/CAS#CAS_[15805-73-9]
has OBO namespace: plant_environment_ontology
subclass of: chemical mutagen

3-H
type: Class
has related synonym: tritium
has OBO namespace: plant_environment_ontology
subclass of: radiation quality regimen

3-H-deoxycytidine
type: Class
has OBO namespace: plant_environment_ontology
subclass of: radiation quality regimen

3-H-thymidine
type: Class
has OBO namespace: plant_environment_ontology
subclass of: radiation quality regimen

32-P
type: Class
has OBO namespace: plant_environment_ontology
subclass of: radiation quality regimen

agr ray
type: Class
has OBO namespace: plant_environment_ontology
subclass of: radiation quality regimen

Bevatron irradiation
type: Class
has OBO namespace: plant_environment_ontology
subclass of: radiation quality regimen

deuteron irradiation
type: Class
has OBO namespace: plant_environment_ontology
subclass of: radiation quality regimen

ggr ray
type: Class
has OBO namespace: plant_environment_ontology
subclass of: radiation quality regimen

137-Cs or ggr ray
type: Class
has OBO namespace: plant_environment_ontology
subclass of: ggr ray

226-Ra or agr ray
type: Class
has related synonym: radium
has OBO namespace: plant_environment_ontology
subclass of: ggr ray

60-Co or ggr ray
type: Class
has OBO namespace: plant_environment_ontology
subclass of: ggr ray

magnetic field
type: Class
has OBO namespace: plant_environment_ontology
subclass of: radiation quality regimen

neutrons
type: Class
has OBO namespace: plant_environment_ontology
subclass of: radiation quality regimen

252-Cf fission neutrons
type: Class
has OBO namespace: plant_environment_ontology
subclass of: neutrons

radio wave
type: Class
has OBO namespace: plant_environment_ontology
subclass of: radiation quality regimen

stratosphere exposure
type: Class
has OBO namespace: plant_environment_ontology
subclass of: radiation quality regimen

supersonic-treatment
type: Class
has OBO namespace: plant_environment_ontology
subclass of: radiation quality regimen

X-ray
type: Class
has definition: The treatment using X-ray either exclusively or as part of a supplemental electromagnetic radiation in the wavelength range of 5pm-10nm.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: radiation quality regimen

hydrogen regimen
type: Class
has definition: The treatment involving exposure of plant to molecular or ionic forms of hydrogen to study various types of responses.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: non-mineral nutrient regimen

Sclerospora spp.
type: Class
has definition: The treatment involving exposure of plant to the pathogenic Sclerospora sp.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: Stramenopiles

Sclerospora graminicola
type: Class
has definition: The treatment involving exposure of plant to the pathogen Sclerophthora graminicola. It is a causal agent for downy mildew disease.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
  has db xref: NCBI_taxid:162130
    type: DbXref
    has URI: http://purl.org/obo/owl/NCBI_taxid#NCBI_taxid_162130
has OBO namespace: plant_environment_ontology
subclass of: Sclerospora spp.

insecticide regimen
type: Class
has definition: The treatment involving use of insecticides to study various types of responses on their application.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: pesticide regimen

imidazolinone
type: Class
has definition: Definition
  label: This type of herbicides are taken up by plant root and leaf tissue and transported to the meristems via both phloem and xylem. The herbicide stops the activity of the enzyme, acetolactate synthase (ALS), which is involved in branch chain amino acid (valine, leucine and isoleucine) synthesis.
  has db xref: web:http://corn.agronomy.wisc.edu/AAdvice/1994/A001.html
    type: DbXref
    has URI: http://purl.org/obo/owl/web#web_http://corn.agronomy.wisc.edu/AAdvice/1994/A001.html
has OBO namespace: plant_environment_ontology
subclass of: herbicide regimen

Spodoptera litura
type: Class
has definition: The treatment involving exposure of plant to the pest commonly calles as cutworm.
  type: Definition
  has db xref: GR:pj
    type: DbXref
    has URI: http://purl.org/obo/owl/GR#GR_pj
has OBO namespace: plant_environment_ontology
subclass of: Spodoptera spp.

part of
type: ObjectProperty
has OBO namespace: plant_environment_ontology