profiles_url

Fee for service

research_opportunity_provided_by

resource_description

Service fee URL

eagle-i_synonym

Lab concerns

Lab suggestions

Privacy concerns

ETL data source

ETL data source file name

Documentation (temp)

Comments

has add access

Edit Token

has remove access

workflow owner

workflow state

Image Analysis Core Laboratory
resource_description: "The facility provides a wide variety of options for the analysis and quantification of fluorescent probes, markers and antibodies within fixed and living cells."
Documentation (temp): invoices and PO's
Comments: Lab would benefit from lab tracking/ software system. I suggested LabLife.com; Lab contact person will be changing as of 6/1
has add access: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
has remove access: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
workflow state: Published
has_contact: Tongge Zhu, Ph.D.
mailing_address: Morehouse School of Medicine 720 Westview Dr. SW Atlanta, GA 30310
contact_email: xyao@msm.edu
phone_number: (404) 752-1968
lab_delivery_address: Morehouse School of Medicine MEB 332 720 Westview Dr. SW Atlanta, GA 30310
has_affiliation: Cell and Tissue Imaging Core
has_url: http://www.msm.edu/research/research_centersandinstitutes/RCMI/coreFacilities/celltissueimaging/imageanalysislab.aspx
has_director: http://msm.eagle-i.net/i/0000012a-2516-80fe-8251-adcb80000000
curator note: TEJ: moved all of lab delivery address to one cell; added "Facility" to lab name; added dashes to contact phone; do we have a new lab contact person?
contributor: http://msm.eagle-i.net/i/00000142-c445-189b-c468-451580000000
created: 2010-07-30T15:41:26.912-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2014-04-25T13:19:52.965-05:00
type: Core Laboratory

Leica LSCM
Privacy concerns: no
ETL data source: cores_v4
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc78-e037-ecc6-81a580000000
model_number: SP5
ERO_0000067: 2006
located_in: Image Analysis Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2010-07-30T15:41:27.831-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2010-07-31T13:30:31.694-05:00
type: confocal microscope

Argon-ion laser
ETL data source: cores_v4
workflow state: Published
curator note: TEJ: added label, per conversation with RNav
located_in: Image Analysis Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2010-07-30T15:41:28.172-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2010-07-31T13:32:50.115-05:00
type: argon ion laser

HeNe 543 laser
workflow state: Published
curator note: TEJ: created row for this instrument per term requested for the 633 laser.
located_in: Image Analysis Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d101-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2010-07-30T15:41:28.374-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-04-12T13:18:41.644-05:00
type: helium neon ion laser

HeNe 633 laser
workflow state: Published
curator note: TEJ: added label and changed type ("Lasers HeNe 633" is not part of ontology); term request refers to label for separate instrument.
located_in: Image Analysis Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d101-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2010-07-30T15:41:28.588-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-04-12T13:19:42.093-05:00
type: helium neon ion laser

Olympus inverted microscope
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc7e-18dc-ecc6-81a580000000
model_number: IX71
located_in: Image Analysis Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d101-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2010-07-30T15:41:29.895-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-04-12T13:25:02.709-05:00
type: inverted microscope

Environmental chamber
workflow state: Published
curator note: TEJ: term request filled.
located_in: Image Analysis Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d101-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2010-07-30T15:41:30.497-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-04-12T13:16:24.820-05:00
type: environmental chamber

Tecan multiwell plate reader
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc85-6dee-ecc6-81a580000000
model_number: GENois Plus
curator note: TEJ: added type -- added term request as synonym in ontology. EJS: added company to label.
located_in: Image Analysis Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d101-12d7-b32980000000
created: 2010-07-30T15:41:31.174-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-04-12T13:30:40.428-05:00
type: microplate reader

Zeiss Axioplan upright microscope
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc6d-4446-ecc6-81a580000000
model_number: Axioplan
curator note: TEJ: term request filled. EJS: added company to label.
located_in: Image Analysis Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d102-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2010-07-30T15:41:31.516-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-06-16T15:08:28.552-05:00
type: upright microscope

CO2 water jacketed incubator
workflow state: Published
curator note: TEJ: term request filled.
located_in: Image Analysis Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d101-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2010-07-30T15:41:31.774-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-04-12T13:14:56.384-05:00
type: CO2 incubator

Spot Insight digital camera
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc84-1a02-ecc6-81a580000000
model_number: Spot Insight
located_in: Image Analysis Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d101-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2010-07-30T15:41:32.170-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-04-12T13:30:12.534-05:00
type: digital camera

EXFO X-Cite LED light source
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc79-7602-ecc6-81a580000000
model_number: EXFO X-Cite
curator note: TEJ: type used (LED light source) is not part of ontology -- annotated to "light source". EJS: added company to label.
located_in: Image Analysis Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d101-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012d-6123-ab8b-392d-ee1480000000
created: 2010-07-30T15:41:32.474-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-06-21T17:08:18.378-05:00
type: light source

Zeiss inverted microscope
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc6d-4446-ecc6-81a580000000
located_in: Image Analysis Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d101-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2010-07-30T15:41:32.751-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-04-12T13:31:04.309-05:00
type: inverted microscope

Millipore Cytofluor Multiwell Fluorescence Plate Reader
ETL data source: cores_v4
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc7b-5919-ecc6-81a580000000
curator note: TEJ: added instrument per website
located_in: Image Analysis Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2010-07-30T15:41:33.096-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2010-07-31T13:32:00.680-05:00
type: microplate reader

Biomedical Technology Service Core Laboratory
resource_description: The Biomedical Technology Service Laboratory (BTSL) Core facility has been in existence for more than twenty years. The BTSL operates in multiple locations which house basic, multi-use equipment, available to all researchers, including: autoclaves, centrifuges, incubators for bacteria and cell cultures, spectrophotometers, scintillation counters, plate readers, luminometer, sonicators and microscopes. The BTSL also provides liquid nitrogen, dry and wet ice, glassware washers and laundry facilities.
eagle-i_synonym: BTSL
Documentation (temp): BTSL Multi Use Equipment.doc
Comments: waiting for lab director to email updated equipment inventory list Carlo: wrong format of first and Last name "The Biomedical Technology Service Laboratory (BTSL) / Multi-Use Instrumentation Facility is a core facility that provides multiple research resources, and equipment support for the biomedical and clinical research faculty at Morehouse School of Medicine."
workflow state: Published
has_contact: Wright, Bettie G., MS
has_PI: Bond, Vincent C., Ph.D.
mailing_address: 720 Westview Drive SW Atlanta, GA 30310
contact_email: bwright@msm.edu
contact_email: nbrowner@msm.edu
phone_number: (404-752-1647
lab_data_format: Word document
lab_delivery_address: MEB C-241 720 Westview Drive SW Atlanta, GA 30310
has_affiliation: Research Centers in Minority Institutions (RCMI), Morehouse School Of Medicine
has_url: http://www.msm.edu/research/clinicalCore_facilities/facilities_biomedicalLab.aspx
has_director: Natasha C. Browner, PhD
curator note: TEJ: updated URL; added lab documentation file name
contributor: http://msm.eagle-i.net/i/00000142-c445-189b-c468-451580000000
created: 2010-07-30T15:41:36.701-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2014-04-25T13:28:27.256-05:00
type: Core Laboratory

Research Centers in Minority Institutions (RCMI), Morehouse School Of Medicine
resource_description: "Major support for the biomedical research infrastructure of Morehouse School of Medicine is received through the Research Centers for Minority Institutions (RCMI) Program, sponsored by the National Centers for Research Resources of the National Institutes of Health."
workflow state: Published
mailing_address: 720 Westview Drive SW Atlanta, GA 30310-1495
has_affiliation: Analytical Chemistry & Protein Profiling Core
has_affiliation: Gene Profiling Core
has_affiliation: Biological Manipulation Core
has_affiliation: Cell and Tissue Imaging Core
has_url: http://www.msm.edu/research/research_centersandinstitutes/RCMI.aspx
contributor: http://msm.eagle-i.net/i/00000142-c445-189b-c468-451580000000
created: 2010-07-30T15:41:36.249-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2014-04-25T13:21:04.194-05:00
type: Center

Wright, Bettie G., MS
resource_description: Has expertise in: "1D & 2D Gel Electrophoresis, Capillary Electrophoresis, Multi-Use Equipment maintenance and instruction."
workflow state: Published
contact_email: bwright@msm.edu
first_name: Bettie
last_name: Wright
phone_number: (404) 752-1647
title: Research Associate
contributor: http://msm.eagle-i.net/i/00000142-c445-189b-c468-451580000000
created: 2010-07-30T15:41:36.580-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2014-04-25T13:28:35.361-05:00
type: person

Beckman Coulter Allegra 6KR centrifuge
resource_description: "The Allegra 6 Series is designed for high-volume labs requiring a simple, durable solution above all else. Save time with the basic, streamlined user interface that is easy to use and quick to program. Available in refrigerated and ambient benchtop and refrigerated knee-well models."
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc6a-37eb-ecc6-81a580000000
model_number: Allegra 6KR
has_url: https://www.beckmancoulter.com/wsrportal/wsr/research-and-discovery/products-and-services/centrifugation/allegra-6-series/index.htm
related_technique: centrifugation
curator note: TEJ: Removed freezers. These are not invisible resources and do not need to be cataloged. AM: Updated name, description, technique, model, website
located_in: Biomedical Technology Service Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012e-c941-70e2-aeaf-df9880000000
created: 2010-07-30T15:41:37.824-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-08-16T16:15:38.864-05:00
type: centrifuge

Beckman Coulter J2-21 centrifuge
Comments: Are these rotors or separate centrifuges?
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc6a-37eb-ecc6-81a580000000
model_number: J2-21
related_technique: centrifugation
curator note: AM: Updated name, technique
located_in: Biomedical Technology Service Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012e-c941-70e2-aeaf-df9880000000
created: 2010-07-30T15:41:38.017-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-08-17T17:58:27.525-05:00
type: centrifuge

Beckman Coulter J2-21M centrifuge
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc6a-37eb-ecc6-81a580000000
model_number: J2-21M
related_technique: centrifugation
curator note: Are these rotors or separate centrifuges? AM: Updated name, technique
located_in: Biomedical Technology Service Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d101-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012e-c941-70e2-aeaf-df9880000000
created: 2010-07-30T15:41:38.213-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-08-17T17:59:18.279-05:00
type: centrifuge

Beckman Coulter Microfuge R microcentrifuge
Comments: Add the instrument type Centrifuge. EJS: added model number. AM: Updated name, technique
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc6a-37eb-ecc6-81a580000000
model_number: Microfuge R
related_technique: centrifugation
located_in: Biomedical Technology Service Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012e-c941-70e2-aeaf-df9880000000
created: 2010-07-30T15:41:38.468-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-08-17T17:43:22.344-05:00
type: microcentrifuge

SP CO2 incubator
workflow state: Published
curator note: Carlo: Deleted term request, moved the value into labe and add instrument type TEJ: annotated to newly added "CO2 Incubator" term
located_in: Biomedical Technology Service Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d101-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2010-07-30T15:41:38.694-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-04-12T13:27:23.086-05:00
type: CO2 incubator

Molecular Devices, Inc. SpectraMax 250 Microplate reader
resource_description: "The Molecular Devices SpectraMax 250 has an optical design that is the only multi-channel system that truly mimics a dual-beam spectrophotometer. Each sample has a discrete sample beam and reference beam so that each well is measured directly. The eight-channel system- consisting of 8 sample beams and 8 reference beams delivers both superior precision and speed of reading across the microplate. Up to 96 assays can be run at one time and users can perform spectral scans from 250 nm to 750 nm."
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc7b-dd37-ecc6-81a580000000
model_number: SpectraMax 250
has_url: http://www.gmi-inc.com/Molecular-Devices-SpectraMax-250-Microplate-Reader.html#product_desc
curator note: Carlo: Fixed instrument type changed label into the term request value TEJ: added manufacturer data
located_in: Biomedical Technology Service Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012d-6123-4d93-392d-ee1480000000
created: 2010-07-30T15:41:39.026-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-04-29T18:36:08.627-05:00
type: microplate reader

Barnstead NANOpure water purification system
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc86-3932-ecc6-81a580000000
model_number: Barnstead NANOpure
curator note: Carlo: changed the label (used the instrument type). EJS: added System to end of label.
located_in: Biomedical Technology Service Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d101-12d7-b32980000000
created: 2010-07-30T15:41:39.411-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-04-12T13:13:40.036-05:00
type: water purification system

Savant speed vac system
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc86-3932-ecc6-81a580000000
curator note: TEJ: updated type. EJS: added manufacturer.
located_in: Biomedical Technology Service Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d101-12d7-b32980000000
created: 2010-07-30T15:41:39.598-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-04-12T13:26:41.244-05:00
type: vacuum centrifuge concentrator

Ohaus Harvard trip balance
Comments: Added the type
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc7d-f022-ecc6-81a580000000
model_number: Harvard
curator note: TEJ: Term request filled; ammended manufacturer data
located_in: Biomedical Technology Service Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d101-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2010-07-30T15:41:39.984-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-04-12T13:24:22.615-05:00
type: balance

Electric gravity steam autoclave
resource_description: Two copies of this instrument available.
workflow state: Published
model_number: 3522
curator note: Deleted model form instrument type
located_in: Biomedical Technology Service Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012d-6123-ab8b-392d-ee1480000000
created: 2010-07-30T15:41:40.365-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-06-20T18:13:08.293-05:00
type: autoclave

Ohaus top loading balance
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc7d-f022-ecc6-81a580000000
located_in: Biomedical Technology Service Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d101-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2010-07-30T15:41:40.756-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-04-12T13:24:43.951-05:00
type: top loading balance

Ohaus analytical balance
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc7d-f022-ecc6-81a580000000
curator note: TEJ: Term request filled
located_in: Biomedical Technology Service Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d101-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2010-07-30T15:41:41.049-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-04-12T13:24:02.532-05:00
type: analytical balance

Millipore 2D gel electrophoresis system
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc7b-5919-ecc6-81a580000000
curator note: changed the label, fixed the document type
located_in: Biomedical Technology Service Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d101-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2010-07-30T15:41:41.641-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-04-12T13:22:38.286-05:00
type: gel electrophoresis system

FOTODYNE light box
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc73-097d-ecc6-81a580000000
located_in: Biomedical Technology Service Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d101-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012d-6123-ab8b-392d-ee1480000000
created: 2010-07-30T15:41:41.973-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-06-22T16:19:24.789-05:00
type: light box

Corning pH meter
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc6e-d7e2-ecc6-81a580000000
curator note: changed label, fixed instrument type, removed term request
located_in: Biomedical Technology Service Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d101-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2010-07-30T15:41:42.359-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-04-12T13:15:15.520-05:00
type: pH meter

Hoefer Red Rocker
ETL data source: cores_v3
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc75-50de-ecc6-81a580000000
curator note: manufacturer not in the right place
located_in: Biomedical Technology Service Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2010-07-30T15:41:42.675-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2010-07-31T12:04:29.003-05:00
type: rocker

SpectraMax 190 Absorbance microplate reader
resource_description: "The patented multichannel optical design of the SpectraMax® 190 Absorbance Microplate Reader mimics a dual beam spectrophotometer, measures each sample in the plate directly, and eliminates measurement error due to variations in light output between optical fibers on other instruments for more reliable data reporting. The eight-channel system delivers both high precision and speed when reading 96-well microplates for endpoint measurements, kinetic assays, and spectral scans. The optical system of the SpectraMax 190 Microplate Reader is built around a monochromator, which allows for selection of up to six wavelengths at a time for absorbance detection in the UV-visible wavelength range (190 nm - 850 nm). Narrow bandwidths deliver increased measurement accuracy and linearity over the widest range of assays, including DNA quantitation in the UV range."
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc7b-dd37-ecc6-81a580000000
model_number: SpectraMax 190
has_url: http://www.moleculardevices.com/Products/Instruments/Microplate-Readers/Single-Mode-Readers/Absorbance/SpectraMax-190.html
related_technique: spectrophotometry
curator note: TEJ: added instrument per attached word doc
located_in: Biomedical Technology Service Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012d-6123-4d93-392d-ee1480000000
created: 2010-07-30T15:41:43.687-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-04-29T18:37:34.179-05:00
type: microplate reader

Baker SterilGARD laminar flow hood
has add access: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
has remove access: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc69-c79c-ecc6-81a580000000
model_number: SterilGARD
curator note: TEJ: added instrument per attached word doc
located_in: Biomedical Technology Service Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d101-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
created: 2010-07-30T15:41:43.957-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2013-12-04T10:56:45.700-06:00
type: laminar flow hood

Solution 2000 water purification system
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc68-c2e4-ecc6-81a580000000
model_number: Solution 2000
curator note: TEJ: added instrument per attached word doc
located_in: Biomedical Technology Service Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d101-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2010-07-30T15:41:44.289-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-04-12T13:27:02.340-05:00
type: water purification system

Agilent 8453 UV/Vis spectrophotometer
resource_description: "The Agilent 8453 UV-Visible spectrophotometer uses a photodiode array (PDA) for simultaneous measurement of the complete ultra-violet to visible light spectrum in less than one second. The PDA technique brings exceptional reliability and repeatability. Using Agilent ChemStation software you get powerful data analysis and data archival to ensure compliance with good laboratory practices (GLP) and pharmacopoeia requirements."
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc67-5972-ecc6-81a580000000
model_number: 8453
has_url: http://www.chem.agilent.com/en-US/Products/Instruments/molecularspectroscopy/uv-vis/systems/8453spectrophotometer/Pages/default.aspx
related_technique: spectrophotometry
curator note: TEJ: added instrument per attached word doc AM: Updated name, type, description, technique, website
located_in: Biomedical Technology Service Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d101-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012e-c941-70e2-aeaf-df9880000000
created: 2010-07-30T15:41:44.706-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-07-28T17:19:33.075-05:00
type: UV/vis spectrophotometer

Eppendorf AG VacuFuge Plus concentrator
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc71-efad-ecc6-81a580000000
model_number: VacuFuge Plus
related_technique: concentrate
curator note: TEJ: added instrument per attached word doc. EJS: added model number.
located_in: Biomedical Technology Service Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012d-6123-ab8b-392d-ee1480000000
created: 2010-07-30T15:41:45.011-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-06-21T15:29:13.384-05:00
type: vacuum centrifuge concentrator

Beckman Coulter LS 6500 liquid scintillation counter
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc6a-37eb-ecc6-81a580000000
model_number: LS 6500
related_technique: liquid scintillation counting
curator note: TEJ: added instrument per attached word doc. EJS: added company to label. AM: Updated name, technique
located_in: Biomedical Technology Service Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d101-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012e-c941-70e2-aeaf-df9880000000
created: 2010-07-30T15:41:45.194-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-08-23T18:15:37.560-05:00
type: scintillation counter

Labconco biosafety cabinet
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc78-535b-ecc6-81a580000000
curator note: TEJ: added instrument per attached word doc
located_in: Biomedical Technology Service Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d101-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2010-07-30T15:41:45.584-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-04-12T13:20:08.558-05:00
type: biological safety cabinet

Forma Scientific CO2 incubator
resource_description: Two copies of this instrument available.
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc86-3932-ecc6-81a580000000
curator note: TEJ: added instrument per attached word doc
located_in: Biomedical Technology Service Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d101-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2010-07-30T15:41:45.898-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-04-12T13:17:09.404-05:00
type: CO2 incubator

Nikon inverted microscope
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc7d-59ea-ecc6-81a580000000
curator note: TEJ: added instrument per attached word doc
located_in: Biomedical Technology Service Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d101-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2010-07-30T15:41:46.743-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-04-12T13:23:14.363-05:00
type: inverted microscope

Coulter Z2 counter
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc6a-37eb-ecc6-81a580000000
model_number: Z2
curator note: TEJ: added instrument per attached word doc. EJS: added manufacturer.
located_in: Biomedical Technology Service Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d101-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d102-12d7-b32980000000
created: 2010-07-30T15:41:46.938-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-06-17T13:38:11.161-05:00
type: automatic cytometer

Eppendorf AG centrifuge
workflow owner: http://msm.eagle-i.net/i/0000012d-6123-ab8b-392d-ee1480000000
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc71-efad-ecc6-81a580000000
related_technique: centrifugation
curator note: TEJ: added instrument per attached word doc
located_in: Biomedical Technology Service Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d101-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012d-6123-ab8b-392d-ee1480000000
created: 2010-07-30T15:41:47.117-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-06-21T15:19:33.627-05:00
type: refrigerated centrifuge

Olympus IX50 fluorescent microscope
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc7e-18dc-ecc6-81a580000000
model_number: IX50
curator note: TEJ: added instrument per attached word doc
located_in: Biomedical Technology Service Core Laboratory
contributor: http://msm.eagle-i.net/i/00000142-be82-baf7-c468-451580000000
created: 2010-07-30T15:41:47.309-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2013-12-06T10:02:24.908-06:00
type: fluorescence microscope

Perkin Elmer Lambda 3B UV/VIS Spectrophotometer
ETL data source: cores_v3
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc7f-3ca1-ecc6-81a580000000
model_number: Lambda 3B
curator note: TEJ: added instrument per attached word doc
located_in: Biomedical Technology Service Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2010-07-30T15:41:47.700-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2010-07-31T12:22:31.732-05:00
type: spectrophotometer

Flow cytometry service
resource_description: Includes cell sorting and bio-image analysis.
workflow state: Published
service_provided_by: Flow Cytometry & Cell Sorting Laboratory
has_url: http://www.msm.edu/research/clinicalCore_facilities/facilities_biomedicalLab.aspx
related_technique: fluorescence activated cell sorting (FACS)
related_technique: flow cytometry assay
curator note: TEJ: formatted name; swapped protocols and labels
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d106-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2010-07-30T15:41:49.578-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-05-02T12:15:16.726-05:00
type: material analysis service

1D and 2D gel electrophoresis service
has add access: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
has remove access: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
workflow state: Published
has_contact: Wright, Bettie G., MS
service_provided_by: Biomedical Technology Service Core Laboratory
has_url: http://www.msm.edu/research/clinicalCore_facilities/facilities_biomedicalLab.aspx
related_technique: two dimensional polyacrylamide gel electrophoresis
related_technique: 1D electrophoresis
curator note: TEJ: swapped protocols and labels. NV: Filled term request
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
contributor: http://msm.eagle-i.net/i/0000012d-7665-2907-9b30-a5a880000000
contributor: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
created: 2010-07-30T15:41:49.815-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2013-12-04T10:43:42.226-06:00
type: material analysis service

Monoclonal/polyclonal antibody production
resource_description: Examples of polyclonal/monoclonal antibodies produced in this lab have been antibodies against conjugated synthetic peptides, viral proteins, chemokines, cytokines, cellular antigens, and protein bands excised from polyacrylamide gels.
workflow state: Published
has_restriction: Permission from individual researchers is needed to share their antibodies.
service_provided_by: Biomedical Technology Service Core Laboratory
has_url: http://www.msm.edu/research/clinicalCore_facilities/facilities_biomedicalLab.aspx
related_technique: polyclonal antibody production
related_technique: monoclonal antibody production
curator note: TEJ: swapped protocols and labels
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
contributor: http://msm.eagle-i.net/i/0000012d-7665-2907-9b30-a5a880000000
created: 2010-07-30T15:41:50.453-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-09-14T18:17:41.859-05:00
type: material production service

Cell culture service
workflow state: Published
service_provided_by: Biomedical Technology Service Core Laboratory
has_url: http://www.msm.edu/research/clinicalCore_facilities/facilities_biomedicalLab.aspx
related_technique: maintaining cell culture
curator note: TEJ: swapped protocols and labels MH: changed type to material processing service. added techniques.
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d106-12d7-b32980000000
created: 2010-07-30T15:41:50.655-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-04-27T12:29:06.491-05:00
type: material processing service

Cryopreservation service
workflow state: Published
service_provided_by: Biomedical Technology Service Core Laboratory
has_url: http://www.msm.edu/research/clinicalCore_facilities/facilities_biomedicalLab.aspx
curator note: TEJ: swapped protocols and labels MH: changed type to material storage service.
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d106-12d7-b32980000000
created: 2010-07-30T15:41:50.860-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-04-27T12:29:19.571-05:00
type: material storage service

Ward, Tarsha
workflow owner: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
workflow state: Published
first_name: Tarsha
last_name: Ward
curator note: (404) 752-1146 -- old phone number still valid?
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2010-07-31T13:43:04.565-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
modified: 2011-04-27T10:44:37.935-05:00
type: person

Image analysis service
resource_description: Service includes: analysis and quantification of fluorescent probes, markers and antibodies within fixed and living cells.
workflow state: Published
service_provided_by: Image Analysis Core Laboratory
has_url: http://www.msm.edu/research/clinicalCore_facilities/facilities_imageAnalysis.aspx
related_technique: confocal microscopy
contributor: http://msm.eagle-i.net/i/0000012d-6123-ab8b-392d-ee1480000000
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created: 2010-08-07T23:41:18.611-05:00
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modified: 2011-04-05T22:04:01.603-05:00
type: material analysis service

Center of Laboratory Animal Resources
resource_description: "Access to CLAR facilities is restricted to authorized investigators with CLAR and IACUC approval. No individuals may enter the facilities without this CLAR/IACUC authorization. Since its inception, the Center for Laboratory Animal Resources (CLAR) has centralized most research and teaching animal care for the Atlanta University Center consortium. Our purpose is to provide total animal care services as needed to all academic and/or research faculty and staff affiliated with any one of the member institutions of the Atlanta University Center (AUC)."
eagle-i_synonym: CLAR
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workflow state: Published
has_contact: Hazel, Phillip
has_contact: Floyd, Donna
has_contact: Paul, Katherine
has_PI: Bond, Vincent C., Ph.D.
mailing_address: 720 Westview Dr. SW Atlanta, GA 30310
contact_email: CLAR@msm.edu
lab_data_format: Excel
lab_delivery_address: Hugh Gloster Building 720 Westview Dr. SW Atlanta, GA 30310
has_url: http://www.msm.edu/research/research_centersandinstitutes/CLAR.aspx
has_director: Champion, James
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modified: 2011-11-28T18:51:21.176-06:00
type: Core Laboratory

Champion, James
ETL data source file name: CLAR_eicores6-16-10.xlsx
workflow state: Published
contact_email: jchampion@msm.edu
first_name: James R.
last_name: Champion
phone_number: (404) 752-1722
title: Director I, CLAR
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modified: 2011-03-29T09:32:37.282-05:00
type: person

Hazel, Phillip
resource_description: Mr Hazel is Laboratory Animal Health Technician in the Center for Laboratory Animal Resources at MSM.
ETL data source file name: CLAR_eicores6-16-10.xlsx
workflow state: Published
mailing_address: Center for Laboratory Animal Resources Morehouse School of Medicine 720 Westview Dr. SW Atlanta GA 30310-1495
contact_email: phazel@msm.edu
first_name: Phillip C.
last_name: Hazel
phone_number: (404) 752-1199
title: Laboratory Manager
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created: 2010-09-11T07:26:06.521-05:00
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modified: 2014-04-28T10:01:53.789-05:00
type: person

AIMS tattoo machine
ETL data source file name: CLAR_eicores6-16-10.xlsx
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc68-495a-ecc6-81a580000000
curator note: EJS: updated annotation with filled term request.
located_in: Center of Laboratory Animal Resources
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d101-12d7-b32980000000
created: 2010-09-11T07:26:08.725-05:00
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modified: 2011-03-23T17:29:05.116-05:00
type: tattoo machine

Basic animal care service
resource_description: Includes feeding, watering, and cleaning of primary and secondary animal enclosures.
ETL data source file name: CLAR_eicores6-16-10.xlsx
workflow state: Published
has_contact: Hazel, Phillip
has_restriction: Available to all academic and/or research faculty and staff affiliated with any one of the member institutions of the Atlanta University Center (AUC).
service_provided_by: Center of Laboratory Animal Resources
has_url: http://www.msm.edu/research/research_centersandinstitutes/CLAR.aspx
related_technique: laboratory animal care
ERO_0001053: true
curator note: NV: Moved data from geographic restriction to restriction. MH: changed type.
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created: 2010-09-11T07:26:09.719-05:00
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modified: 2011-11-28T18:51:11.094-06:00
type: material maintenance service

Clinical and health monitoring service
ETL data source file name: CLAR_eicores6-16-10.xlsx
workflow state: Published
has_contact: Floyd, Donna
has_restriction: Available to all academic and/or research faculty and staff affiliated with any one of the member institutions of the Atlanta University Center (AUC).
service_provided_by: Center of Laboratory Animal Resources
has_url: http://www.msm.edu/research/research_centersandinstitutes/CLAR.aspx
related_technique: clinical monitoring
related_technique: animal physiology monitoring
ERO_0001053: true
curator note: NV: Moved data from geographic restriction to restriction.
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d106-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012d-6123-ab8b-392d-ee1480000000
created: 2010-09-11T07:26:10.133-05:00
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mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-11-28T18:51:03.510-06:00
type: material analysis service

Humane euthanasia service
ETL data source file name: CLAR_eicores6-16-10.xlsx
workflow state: Published
has_contact: Floyd, Donna
has_restriction: Available to all academic and/or research faculty and staff affiliated with any one of the member institutions of the Atlanta University Center (AUC).
service_provided_by: Center of Laboratory Animal Resources
has_url: http://www.msm.edu/research/research_centersandinstitutes/CLAR.aspx
related_technique: animal euthanization
ERO_0001053: true
curator note: mh changed type and added technique.
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012d-6123-ab8b-392d-ee1480000000
created: 2010-09-11T07:26:10.633-05:00
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mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-11-28T18:50:54.883-06:00
type: material processing service

Animal disposal service
resource_description: Includes disposal of all animal species upon termination of experimental protocol.
ETL data source file name: CLAR_eicores6-16-10.xlsx
workflow state: Published
has_contact: Hazel, Phillip
has_restriction: Available to all academic and/or research faculty and staff affiliated with any one of the member institutions of the Atlanta University Center (AUC).
service_provided_by: Center of Laboratory Animal Resources
has_url: http://www.msm.edu/research/research_centersandinstitutes/CLAR.aspx
related_technique: laboratory animal care
ERO_0001053: true
curator note: NV: Moved data from geographic restriction to restriction. MH changed type, title added technique.
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012d-6123-ab8b-392d-ee1480000000
created: 2010-09-11T07:26:10.928-05:00
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mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-11-28T18:50:46.541-06:00
type: material processing service

Animal quarantine service
resource_description: Includes maintenance of immunologically compromised animals behind specified barriers, i.e. Specific Pathogen Free (S.P.F.) rabbits, thymectomized mice etc.
ETL data source file name: CLAR_eicores6-16-10.xlsx
workflow state: Published
has_contact: Floyd, Donna
has_restriction: Available to all academic and/or research faculty and staff affiliated with any one of the member institutions of the Atlanta University Center (AUC).
service_provided_by: Center of Laboratory Animal Resources
has_url: http://www.msm.edu/research/research_centersandinstitutes/CLAR.aspx
related_technique: laboratory animal care
ERO_0001053: true
curator note: NV: Moved data from geographic restriction to restriction. MH changed type and label.
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012d-6123-ab8b-392d-ee1480000000
created: 2010-09-11T07:26:11.439-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-11-28T18:50:36.981-06:00
type: material maintenance service

Necropsy and diagnostics service
resource_description: Service provided by CLAR within the per diem charges.
ETL data source file name: CLAR_eicores6-16-10.xlsx
workflow state: Published
has_contact: Floyd, Donna
has_restriction: Available to all academic and/or research faculty and staff affiliated with any one of the member institutions of the Atlanta University Center (AUC).
service_provided_by: Center of Laboratory Animal Resources
has_url: http://www.msm.edu/research/research_centersandinstitutes/CLAR.aspx
related_technique: autopsy
ERO_0001053: true
curator note: NV: Moved data from geographic restriction to restriction. MH changed type and technique.
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
contributor: http://msm.eagle-i.net/i/0000012d-6123-ab8b-392d-ee1480000000
created: 2010-09-11T07:26:11.698-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-11-28T18:50:28.624-06:00
type: material analysis service

Animal vaccination service
resource_description: Routine vaccination against common pathogens, i.e. Sendai, I.C.H. etc., will be absorbed by CLAR.
ETL data source file name: CLAR_eicores6-16-10.xlsx
workflow state: Published
has_contact: Floyd, Donna
has_restriction: Available to all academic and/or research faculty and staff affiliated with any one of the member institutions of the Atlanta University Center (AUC).
service_provided_by: Center of Laboratory Animal Resources
has_url: http://www.msm.edu/research/research_centersandinstitutes/CLAR.aspx
related_technique: laboratory animal care
ERO_0001053: true
curator note: NV: Moved data from geographic restriction to restriction. MH: changed type.
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012d-6123-ab8b-392d-ee1480000000
created: 2010-09-11T07:26:11.991-05:00
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mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-11-28T18:50:19.594-06:00
type: material processing service

Animal use consultation service
resource_description: Includes consultation on veterinary, regulatory, and/or animal model aspects of laboratory animal use, as requested by investigators.
ETL data source file name: CLAR_eicores6-16-10.xlsx
workflow state: Published
has_contact: Paul, Katherine
has_restriction: Available to all academic and/or research faculty and staff affiliated with any one of the member institutions of the Atlanta University Center (AUC).
service_provided_by: Center of Laboratory Animal Resources
has_url: http://www.msm.edu/research/research_centersandinstitutes/CLAR.aspx
related_technique: laboratory animal care
ERO_0001053: true
curator note: NV: Moved data from geographic restriction to restriction.
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012d-6123-ab8b-392d-ee1480000000
created: 2010-09-11T07:26:13.338-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-11-28T18:50:11.485-06:00
type: support service

Breeding service
resource_description: Service includes assistance with breeding.
ETL data source file name: CLAR_eicores6-16-10.xlsx
workflow state: Published
has_contact: Floyd, Donna
has_restriction: Available to all academic and/or research faculty and staff affiliated with any one of the member institutions of the Atlanta University Center (AUC).
service_provided_by: Center of Laboratory Animal Resources
has_url: http://www.msm.edu/research/research_centersandinstitutes/CLAR.aspx
related_technique: laboratory animal care
ERO_0001053: true
curator note: NV: Moved data from geographic restriction to restriction. MH changed type.
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
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created: 2010-09-11T07:26:13.622-05:00
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modified: 2011-11-28T18:50:02.901-06:00
type: material production service

Animal sample collection service
resource_description: Assistance with sample collection.
ETL data source file name: CLAR_eicores6-16-10.xlsx
workflow state: Published
has_contact: Floyd, Donna
has_restriction: Available to all academic and/or research faculty and staff affiliated with any one of the member institutions of the Atlanta University Center (AUC).
service_provided_by: Center of Laboratory Animal Resources
has_url: http://www.msm.edu/research/research_centersandinstitutes/CLAR.aspx
related_technique: collecting specimen from organism
ERO_0001053: true
curator note: NV: Moved data from geographic restriction to restriction. MH changed type, added technique, changed label.
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
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created: 2010-09-11T07:26:13.923-05:00
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modified: 2011-11-28T18:49:53.587-06:00
type: material processing service

Assistance with minor surgery
ETL data source file name: CLAR_eicores6-16-10.xlsx
workflow state: Published
has_contact: Floyd, Donna
has_restriction: Available to all academic and/or research faculty and staff affiliated with any one of the member institutions of the Atlanta University Center (AUC).
service_provided_by: Center of Laboratory Animal Resources
has_url: http://www.msm.edu/research/research_centersandinstitutes/CLAR.aspx
related_technique: small animal surgery
ERO_0001053: true
curator note: NV: Moved data from geographic restriction to restriction. MH. changed type. added technique.
contributor: http://msm.eagle-i.net/i/0000012d-6123-ab8b-392d-ee1480000000
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created: 2010-09-11T07:26:14.154-05:00
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mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-11-28T18:49:45.996-06:00
type: support service

Animal tattooing service
ETL data source file name: CLAR_eicores6-16-10.xlsx
workflow state: Published
has_contact: Floyd, Donna
provides_access_to: AIMS tattoo machine
has_restriction: Available to all academic and/or research faculty and staff affiliated with any one of the member institutions of the Atlanta University Center (AUC).
has_restriction: Requires notation on IACUC application.
service_provided_by: Center of Laboratory Animal Resources
has_url: http://www.msm.edu/research/research_centersandinstitutes/CLAR.aspx
related_technique: animal tattooing
ERO_0001053: true
curator note: NV: Moved data from geographic restriction to restriction. Added technique.
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
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created: 2010-09-11T07:26:14.449-05:00
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mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-11-28T18:49:33.266-06:00
type: material processing service

Floyd, Donna
resource_description: Ms. Donna Floyd is Laboratory Animal Health Technician in the Center for Laboratory Animal Resources at MSM.
workflow state: Published
mailing_address: Center for Laboratory Animal Resources Morehouse School of Medicine 720 Westview Dr. SW Atlanta GA 30310-1495
contact_email: dfloyd@msm.edu
first_name: Donna
last_name: Floyd
phone_number: 404-752-8468
title: Lab/Animal Health Technician
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created: 2010-09-11T07:26:09.964-05:00
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modified: 2014-04-28T10:00:32.021-05:00
type: person

Paul, Katherine
ETL data source file name: CLAR_eicores6-16-10.xlsx
workflow state: Published
contact_email: kspears-paul@msm.edu
first_name: Katherine
last_name: Paul
phone_number: (404) 678-524-6488
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created: 2010-09-11T07:26:13.196-05:00
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modified: 2011-03-29T09:58:22.673-05:00
type: person

Emmett, Neremiah
resource_description: Dr. Emmett is expert in the analysis of Gene Expression using microarray-based technology, and is scientific consultant to the Functional Genomics (microarray) lab, in the Gene Profiling core at MSM.
ETL data source file name: FunctionalGenomicCorePRP_MSM_v4(1).xlsx
workflow state: Published
contact_email: nemmett@msm.edu
first_name: Neremiah
last_name: Emmett
phone_number: (404) 752-1679
title: Functional Genomics Core Leader
performs: array scanning
contributor: http://msm.eagle-i.net/i/00000142-c445-189b-c468-451580000000
created: 2010-09-11T07:26:15.933-05:00
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modified: 2014-04-28T09:46:37.586-05:00
type: person

Leander-Griffith, Michelle V.
resource_description: Ms. Leander-Griffith is Research Assistant in the Functional Genomics (Microarray) lab, Gene Profiling Core at MSM.
ETL data source file name: FunctionalGenomicCorePRP_MSM_v4(1).xlsx
workflow state: Published
mailing_address: Room C-241, Medical Education Building Morehouse School of Medicine 720 Westview Dr. SW Atlanta Ga 30310-1495
contact_email: mleander@msm.edu
first_name: Michelle
last_name: Leander-Griffith
phone_number: (404) 756-8940
title: Research Assistant
performs: array scanning
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created: 2010-09-11T07:26:16.062-05:00
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modified: 2014-04-28T10:20:23.192-05:00
type: person

Agilent scanner
resource_description: Scanner for Microarrays.
Privacy concerns: No
ETL data source file name: FunctionalGenomicCorePRP_MSM_v4(1).xlsx
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc67-5972-ecc6-81a580000000
has_inventory_number: 6630
model_number: 14702358
related_technique: array scanning
curator note: added type AM: Updated technique
located_in: Functional Genomics Core Laboratory
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created: 2010-09-11T07:26:16.809-05:00
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mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-08-08T13:49:10.057-05:00
type: array scanner

Agilent 2100 Bioanalyzer
resource_description: "The Agilent 2100 Bioanalyzer is a microfluidics-based platform for sizing, quantification and quality control of DNA, RNA, proteins and cells on a single platform. Results are delivered within 30-40 minutes in automated, high quality digital data."
Privacy concerns: No
ETL data source file name: FunctionalGenomicCorePRP_MSM_v4(1).xlsx
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc67-5972-ecc6-81a580000000
has_inventory_number: 6629
model_number: 2100
model_number: G2938A
has_url: http://www.genomics.agilent.com/CollectionSubpage.aspx?PageType=Product&SubPageType=ProductDetail&PageID=1627
related_technique: RNA quality analysis
curator note: added type AM: Updated description, technique, model, website. NV: changed type, added technique.
located_in: Functional Genomics Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2010-09-11T07:26:17.035-05:00
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mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2012-06-05T18:42:27.388-05:00
type: microfluidics platform

Robbins Scientific hybridization chamber
Privacy concerns: No
ETL data source file name: FunctionalGenomicCorePRP_MSM_v4(1).xlsx
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc86-3932-ecc6-81a580000000
has_inventory_number: 17199
located_in: Functional Genomics Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012d-7665-2907-9b30-a5a880000000
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mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-04-29T17:45:37.348-05:00
type: hybridization chamber

Biomedical Informatics Unit (BIU)
resource_description: The Biomedical Informatics Unit (BIU) of the Morehouse School of Medicine (MSM) RCMI Center of Excellence for Clinical and Translational Research (R- CENTER) focuses on integration of MSM and affiliated health information systems -- electronic medical and personal health records, patient databases, and other research databases (basic, translational, clinical and population-based) -- into an interoperable repository. The long-term goal is to establish an integrated standards-based informatics platform to support MSM clinical and translational research investigators in their own work and in sharing research information with collaborators and other investigators in parallel fields. Ultimately, the interoperable repository platform will expand scientific discovery and research translation of MSM investigators in collaboration with A-CTSI partners as well as the RCMI consortium. The building blocks of the repository have begun with the i2b2 platform. i2b2 (Informatics for Integrating Biology and the Bedside) is an NIH-funded National Center for Biomedical Computing based at Partners HealthCare System. The i2b2 is a scalable informatics framework that will bridge clinical research data and the vast data banks arising from basic science research in order to better understand the genetic bases of complex diseases. This knowledge will facilitate the design of targeted therapies for individual patients with diseases having genetic origins. i2b2 is being implemented across a number of collaborative research networks. These linked data will serve as a major institutional resource for advancing clinical/translational research, and enhancing career development for clinical/translational research, community health, health services/outcomes and clinical trials. The creation of an integrated data repository will greatly enhance the training and career development goals of the R-CENTER by facilitating ready access to critical research data that will support trainees in the CRECD prog[cell cut: 2437 characters, first 2000 kept]
ETL data source file name: 2_Bioinfor.lab_annform_v3.xlsx
workflow state: Published
has_contact: William Seffens, Ph.D.
has_contact: Alexander Quarshie, MD MS
mailing_address: 720 Westview Dr. SW Atlanta, GA 30310
contact_email: aquarshie@msm.edu
contact_email: wseffens@msm.edu
phone_number: 404-752-1683
phone_number: 404-752-8681
lab_delivery_address: 720 Westview Dr. SW Atlanta, GA 30310
has_affiliation: http://global.eagle-i.net/i/0000013d-bc80-fb02-ecc6-81a580000000
performs: bioinformatics analysis
has_url: http://www.msm.edu/research/research_centersandinstitutes/RCMI/coreFacilities/geneprofiling/bioinformaticslab.aspx
has_url: https://rcenterportal.msm.edu/node/33
has_director: William Seffens, Ph.D.
has_director: Alexander Quarshie, MD MS
has_organization_member: Ernest Alema-Mensah, PhD, D.Min, MS, M.Div.
has_organization_member: Helen D. Tyree, BS
has_organization_member: Chad Evans
has_organization_member: Afebuameh Ogbesor
contributor: http://msm.eagle-i.net/i/00000142-c445-189b-c468-451580000000
created: 2010-09-11T07:26:22.156-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2014-04-25T13:25:16.889-05:00
type: Core Laboratory

Anderson, Leonard, Ph.D.
workflow state: Published
contact_email: landerson@msm.edu
first_name: Leonard
last_name: Anderson
phone_number: (404) 756-8920
has_url: http://www.msm.edu/research/research_centersandinstitutes/cvri/research_cni_cardio_facultystaff/Leonard_Anderson.aspx
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
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modified: 2012-03-21T15:21:31.011-05:00
type: person

Analytical Chemistry Laboratory
resource_description: The primary focus of the Analytical Chemistry Laboratory is to provide reliable and comprehensive analytical services to basic and clinical researchers. These services include: 1. Custom sample analysis by High-performance liquid chromatography (HPLC). 2. ELISA 3. Electrolytes analyses 4. Sample preparation (derivatization and extraction/purification) 5. Data reports and QC reports 6. Consultation in analytical techniques and methodology Equipment/Technology 1. High Performance Liquid Chromatography (HPLC): Custom analyses by HPLC can include (but not limited to): amino acids; thiols (total, oxidized, reduced); chiral and racemic compounds such as warfarin and clenbuterol; etc. i. Agilent 1100 series HPLC equipped with a diode array detector (DAD), variable wavelength detector (VWD), 1046 series fluorescence detector. ii. Agilent 1100 series HPLC system equipped with 1100 series fluorescence detector. 2. Molecular Devices SpectroMax Plus microtiter plate reader and variable wavelength UV-Visible spectrophotometer to perform Colorimetric and Enzyme-linked Immunosorbent assays. 3. NOVA Electrolytes Analyzer for analyses of Na+, P+, TCa+, Li+, Cl- in biological fluids. Service Charges The Analytical Chemistry Laboratory performs custom testing and has a standard fee schedule for services. The fee structure is based on the amount of time required to process the samples (extraction, derivatization, etc.) and the cost of supplies and reagents. For non-NIH sponsored projects (MSM and outside institutions and corporations), labor costs are assessed. A complete listing of currently available tests or cost per requested assay can be emailed or faxed upon request. Additionally, since the Analytical Chemistry Laboratory performs custom testing, if the requested assay is not on the list, please contact the core leader directly for test availability and the most up-to-date pricing.
Lab suggestions: TEJ: is there an actual mailing address?
Privacy concerns: PRP: Done
ETL data source file name: analytical_chem_eicores_v4.xlsx
Documentation (temp): log books, protocols
workflow state: Published
has_contact: Silvestrov, Natalia A., MS
mailing_address: Dept. of Pharmacology and Toxicology 720 Westview Dr., S.W. Atlanta, GA 30310
contact_email: nsilvestrov@msm.edu
phone_number: 404-756-5007
lab_data_format: Excel spreadsheet
lab_delivery_address: Building MRC, Room 127 720 Westview Dr., S.W. Atlanta GA 30310
has_affiliation: Analytical Chemistry & Protein Profiling Core
performs: high performance liquid chromatography
performs: electrolyte analysis
performs: ELISA
has_url: http://www.msm.edu/research/research_centersandinstitutes/RCMI/coreFacilities/analyticalchemistry/coreAnalytical.aspx
has_director: Powell, Michael D., Ph.D.
curator note: TJ: filled technique term request
contributor: http://msm.eagle-i.net/i/00000142-c445-189b-c468-451580000000
created: 2010-09-11T07:26:33.432-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
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modified: 2014-04-25T13:33:28.946-05:00
type: Core Laboratory

Analytical Chemistry & Protein Profiling Core
resource_description: The Analytical Chemistry and Protein Profiling Core is comprised of three service core labs: A. Analytical Chemistry Lab The primary focus of the Analytical Chemistry Laboratory is to provide reliable and comprehensive analytical services to basic and clinical researchers. These services include: 1. Custom sample analysis by High-performance liquid chromatography (HPLC). 2. ELISA 3. Electrolytes analyses 4. Sample preparation (derivatization and extraction/purification) 5. Data reports and QC reports 6. Consultation in analytical techniques and methodology B. Luminex Lab The Luminex Lab has a Bio-Plex 200 multiplex plate reader, which allows simultaneous analytical measurement of multiple protein biomarkers linked to beads, and provides for exquisite sensitivity, specificity, and precise measurements from small sample volumes. Services include: 1. Multiplex Immunoassays 2. QuantiGene Multiplex Assays C. Proteomics Lab Proteins can be identified by trypsin digestion and subsequent analysis of peptides by LC/MS/MS. Samples can be bands or spots from 1D or 2D gel electrophoresis or solutions of moderate complexity. Expression analysis can be done using ProteoIQ software to compare samples. Pathway analysis can be done in order to identify biological processes and relationships. Analysis of protein translational modifications PTMs can also be done.
ETL data source file name: analytical_chem_eicores_v4.xlsx
workflow state: Published
has_affiliation: Analytical Chemistry Laboratory
has_affiliation: Proteomics Laboratory
has_affiliation: Luminex Laboratory
has_url: http://www.msm.edu/research/research_centersandinstitutes/RCMI/coreFacilities/analyticalchemistry.aspx
curator note: not sure how to treat this and other "umbrella cores" that link to labs but don't have their own resources. need to discuss - TJ
contributor: http://msm.eagle-i.net/i/00000142-c445-189b-c468-451580000000
created: 2010-09-11T07:26:33.040-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2014-04-28T10:13:49.164-05:00
type: Core Laboratory

Silvestrov, Natalia A., MS
workflow state: Published
contact_email: nsilvestrov@msm.edu
first_name: Natalia
last_name: Silvestrov
phone_number: (404) 756-5707
title: Laboratory Manager
title: Research Associate
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modified: 2011-03-29T14:02:29.256-05:00
type: person

Agilent HPLC system
resource_description: Lab contains two copies of this instrument, one equipped with a 1100 series Fluorescence Detector (FD) and an Agilent 1049A Electrochemical Detector (ECD), and the other equipped with a Diode Array Detector (DAD), a Variable Wavelength Detector (VWD) and a 1046A Fluorescence Detector (FD).
ETL data source file name: analytical_chem_eicores_v4.xlsx
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc67-5972-ecc6-81a580000000
model_number: 1100
has_documentation: HPLC method for determination of ADMA, SDMA and arginine in plasma samples protocol
has_documentation: HPLC method for determination amino acids protocol
has_documentation: HPLC method for determination of p-Aminohippuric (PAH) Acid in plasma and urine samples protocol
has_documentation: Total thiols in plasma HPLC method
has_documentation: HPLC assay for vanillin and vanillic acid protocol
has_documentation: Chiral HPLC analysis of R- and S-Warfarin in plasma samples protocol
curator note: EJS: added Agilent Technologies to label.
located_in: Analytical Chemistry Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d101-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012d-6123-ab8b-392d-ee1480000000
created: 2010-09-11T07:26:34.661-05:00
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modified: 2011-07-28T16:45:06.630-05:00
type: high performance liquid chromatography instrument

SpectroMax Plus microplate reader
resource_description: "The patented multichannel optical design of the SpectraMax® Plus384 Absorbance Microplate Reader mimics a dual beam spectrophotometer, measuring each sample in the plate directly, eliminating measurement error due to variations in light output between optical fibers on other instruments for more reliable data reporting. The nine-channel system delivers both high precision and speed when reading cuvettes, 96-well, and 384-well microplates for endpoint measurements, kinetic assays, and spectral scans."
eagle-i_synonym: SpectraMax Plus384 Absorbance microplate reader
ETL data source file name: analytical_chem_eicores_v4.xlsx
Comments: microplate reader per lab
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc7b-dd37-ecc6-81a580000000
model_number: SpectraMax Plus
has_url: http://www.moleculardevices.com/Products/Instruments/Microplate-Readers/Single-Mode-Readers/Absorbance/SpectraMax-Plus-384.html
related_technique: spectrophotometry
curator note: TEJ: not sure if this should be classified as a microplate reader or a spectrophotometer -- ask the lab? Ok. EJS: added microplate reader to label.
located_in: Analytical Chemistry Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d101-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012d-6123-4d93-392d-ee1480000000
created: 2010-09-11T07:26:35.002-05:00
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modified: 2011-04-29T18:33:25.659-05:00
type: microplate reader

Agilent (HP) 6890 Series capillary GC
resource_description: With Flame Ionization Detector (FID) and Nitrogen Phosphorus Detector (NPD).
ETL data source file name: analytical_chem_eicores_v4.xlsx
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc67-5972-ecc6-81a580000000
model_number: G1530A
located_in: Analytical Chemistry Laboratory
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created: 2010-09-11T07:26:35.684-05:00
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modified: 2010-10-28T15:36:19.769-05:00
type: gas chromatography detector

Agilent (HP) 5890 Series capillary GC
ETL data source file name: analytical_chem_eicores_v4.xlsx
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc67-5972-ecc6-81a580000000
model_number: 5890E
located_in: Analytical Chemistry Laboratory
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created: 2010-09-11T07:26:35.906-05:00
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modified: 2010-10-28T15:36:44.642-05:00
type: gas chromatography detector

Agilent 5972 High Sensitivity Mass Spectrometer (MSD)
ETL data source file name: analytical_chem_eicores_v4.xlsx
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc67-5972-ecc6-81a580000000
model_number: 5972
related_technique: mass spectrometry assay
curator note: EJS: added company to label. AM: Updated name, technique
located_in: Analytical Chemistry Laboratory
contributor: http://msm.eagle-i.net/i/0000012e-c941-70e2-aeaf-df9880000000
created: 2010-09-11T07:26:36.117-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
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modified: 2011-08-08T13:41:29.126-05:00
type: mass spectrometer

NOVA 10+ analyzer
resource_description: Allows analysis of Na, K, total Ca,Li, Cl.
ETL data source file name: analytical_chem_eicores_v4.xlsx
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc7d-83d7-ecc6-81a580000000
model_number: N10591161
curator note: TEJ: term request filled
located_in: Analytical Chemistry Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2010-09-11T07:26:36.541-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
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modified: 2010-10-27T16:00:26.446-05:00
type: electrolyte analyzer

HPLC method for determination of ADMA, SDMA and arginine in plasma samples protocol
ETL data source file name: analytical_chem_eicores_v4.xlsx
Documentation (temp): ADMA (plasma).doc
workflow state: Published
specifies_the_use_of: Agilent HPLC system
specifies_the_use_of: high performance liquid chromatography
used_by: Analytical Chemistry Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
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created: 2010-09-11T07:26:37.574-05:00
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modified: 2011-04-25T21:47:55.112-05:00
type: protocol

HPLC method for determination amino acids protocol
ETL data source file name: analytical_chem_eicores_v4.xlsx
Documentation (temp): Amino acids I.doc
workflow state: Published
specifies_the_use_of: Agilent HPLC system
specifies_the_use_of: high performance liquid chromatography
used_by: Analytical Chemistry Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2010-09-11T07:26:37.792-05:00
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modified: 2011-04-25T21:47:18.303-05:00
type: protocol

HPLC method for determination of p-Aminohippuric (PAH) Acid in plasma and urine samples protocol
ETL data source file name: analytical_chem_eicores_v4.xlsx
Documentation (temp): PAH.doc
workflow state: Published
specifies_the_use_of: Agilent HPLC system
specifies_the_use_of: high performance liquid chromatography
used_by: Analytical Chemistry Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2010-09-11T07:26:38.110-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
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modified: 2011-04-25T21:48:29.709-05:00
type: protocol

Total thiols in plasma HPLC method
resource_description: Thiols include: * Homocysteine * Cysteine * Glutathione
ETL data source file name: analytical_chem_eicores_v4.xlsx
Documentation (temp): Total thiols.doc
workflow state: Published
specifies_the_use_of: Agilent HPLC system
specifies_the_use_of: high performance liquid chromatography
used_by: Analytical Chemistry Laboratory
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2010-09-11T07:26:38.349-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
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modified: 2011-04-25T21:49:31.318-05:00
type: protocol

HPLC assay for vanillin and vanillic acid protocol
ETL data source file name: analytical_chem_eicores_v4.xlsx
Documentation (temp): Vanillin-Vanillic acid.doc
workflow state: Published
specifies_the_use_of: Agilent HPLC system
specifies_the_use_of: high performance liquid chromatography
used_by: Analytical Chemistry Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2010-09-11T07:26:38.582-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-04-25T21:46:57.909-05:00
type: protocol

Chiral HPLC analysis of R- and S-Warfarin in plasma samples protocol
ETL data source file name: analytical_chem_eicores_v4.xlsx
Documentation (temp): Warfarin chiral (ChlWarf)).doc
workflow state: Published
specifies_the_use_of: Agilent HPLC system
specifies_the_use_of: high performance liquid chromatography
used_by: Analytical Chemistry Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d106-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2010-09-11T07:26:38.766-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
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modified: 2011-04-25T21:46:24.875-05:00
type: protocol

SoftMax Pro
resource_description: "SoftMax® Pro Data Acquisition & Analysis Software serves as the user interface to the popular EMax®, VMax™, Gemini™, and SpectraMax® Microplate Readers. Users are able to customize reader settings through the software to take advantage of unique reader technologies that improve the quality of assay data such as: temperature-independent pathlength correction for absorbance measurements and automatic gain correction for fluorescence."
ETL data source file name: analytical_chem_eicores_v4.xlsx
Documentation (temp): 39932-WLKC
Comments: see changes, no term request seems necessary now
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc7b-dd37-ecc6-81a580000000
used_by: Analytical Chemistry Laboratory
version: 3.0
has_url: http://www.moleculardevices.com/Products/Software/SoftMax-Pro.html
has_software_license: Proprietary commercial software license
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012d-6123-ab8b-392d-ee1480000000
created: 2010-09-11T07:26:38.988-05:00
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mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-11-28T18:45:05.240-06:00
type: software

Electrolytes analysis service
Fee for service: true
resource_description: Service includes analysis for: sodium, potassium, total calcium and lithium.
ETL data source file name: analytical_chem_eicores_v4.xlsx
Documentation (temp): Lab's menu.xls
Comments: PRP: No, comment in regards to the labs speciality
workflow state: Published
has_contact: Silvestrov, Natalia A., MS
provides_access_to: NOVA 10+ analyzer
service_provided_by: Analytical Chemistry Laboratory
has_url: http://www.msm.edu/research/research_centersandinstitutes/RCMI/coreFacilities/analyticalchemistry/coreAnalytical.aspx
related_technique: high throughput sample analysis
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d106-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012d-7665-2907-9b30-a5a880000000
created: 2010-09-11T07:26:39.231-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-04-05T18:02:02.318-05:00
type: material analysis service

ELISA/colorimetric assays service
Fee for service: true
resource_description: Provides analysis for 8-isoprostane (in urine), adiponectin total, adiponectin multimeric, TNF, hsCRP, 25-hydroxy vitamin D, 1,25-dihydroxy vitamin D, nitric, oxide, and aldosterone.
ETL data source file name: analytical_chem_eicores_v4.xlsx
Documentation (temp): Lab's menu.xls
Comments: answered, PRP
workflow state: Published
has_contact: Silvestrov, Natalia A., MS
provides_access_to: SpectroMax Plus microplate reader
service_provided_by: Analytical Chemistry Laboratory
has_url: http://www.msm.edu/research/research_centersandinstitutes/RCMI/coreFacilities/analyticalchemistry/coreAnalytical.aspx
related_technique: ELISA
curator note: TEJ: which instruments do these use?
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d106-12d7-b32980000000
created: 2010-09-11T07:26:39.710-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-04-05T17:46:08.914-05:00
type: material analysis service

High performance liquid chromatography service
Fee for service: true
resource_description: Performs HPLC analysis of samples.
ETL data source file name: analytical_chem_eicores_v4.xlsx
Documentation (temp): Lab's menu.xls
has add access: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
Edit Token: http://msm.eagle-i.net/i/0000012f-27e5-440e-38fa-ed3d80000000
has remove access: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
workflow state: Published
has_contact: Silvestrov, Natalia A., MS
provides_access_to: Agilent HPLC system
service_provided_by: Analytical Chemistry Laboratory
has_url: http://www.msm.edu/research/research_centersandinstitutes/RCMI/coreFacilities/analyticalchemistry/coreAnalytical.aspx
realizes_protocol: HPLC method for determination of ADMA, SDMA and arginine in plasma samples protocol
realizes_protocol: HPLC method for determination amino acids protocol
realizes_protocol: HPLC method for determination of p-Aminohippuric (PAH) Acid in plasma and urine samples protocol
realizes_protocol: Total thiols in plasma HPLC method
realizes_protocol: HPLC assay for vanillin and vanillic acid protocol
realizes_protocol: Chiral HPLC analysis of R- and S-Warfarin in plasma samples protocol
related_technique: high performance liquid chromatography
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d106-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
created: 2010-09-11T07:26:41.424-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2013-12-04T14:46:20.579-06:00
type: material analysis service

Luminex service
resource_description: "The core lab has a BioPlex bead sorter, which allows the analysis of multiplex assays such as ELISAs from a single, small volume sample." "The Luminex 100/200 System is a flexible analyzer based on the principles of flow cytometry. The system enables you to multiplex (simultaneously measure) up to 100 analytes in a single microplate well, using very small sample volumes. The system delivers fast and cost-effective bioassay results on many assay formats including nucleic acid assays, receptor-ligand assays, immunoassays and enzymatic assays." BioPlex (Luminex) analysis is performed for the following proteins: 6 Plex: TNF-a, IL-6, Leptin, MCP-1, HGF, Insulin 2 Plex: Resistin, Total PAI1 1 Plex: Active PAI1 1 Plex: Insulin
Service fee URL: http://www.msm.edu/research/research_centersandinstitutes/RCMI/coreFacilities/analyticalchemistry/coreProtein.aspx
ETL data source file name: analytical_chem_eicores_v4.xlsx
Documentation (temp): Lab's menu.xls
Comments: answered, PRP
workflow state: Published
has_contact: Silvestrov, Natalia A., MS
provides_access_to: Luminex analyzer
service_provided_by: Analytical Chemistry Laboratory
has_url: http://www.luminexcorp.com/Products/Instruments/Luminex100200/index.htm
related_technique: high performance liquid chromatography
related_technique: multiplex bead assay
related_technique: gas chromatography-mass spectrometry
related_technique: ELISA
curator note: TEJ: I took this label from the lab menu word doc, but I'm not sure what it refers to. Is this a company? A type of test? Is there a more descriptive label that would be better? Also I don't know which instruments these tests use?
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2010-09-11T07:26:41.858-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
mediator: http://msm.eagle-i.net/i/00000129-f7a5-d107-12d7-b32980000000
modified: 2011-09-15T10:08:45.197-05:00
type: material analysis service

Griffin, James P., Ph.D.
resource_description: For over thirty years, Dr. James P. Griffin, Jr. has been involved in behavioral health promotion, training, education, and research. He has an earned doctorate in psychology with specialized training in behavior modification, school psychology, and community/organizational psychology. He is affiliated with the Metro Atlanta Violence Prevention Partnership (MAVPP)
Comments: PI
workflow state: Published
mailing_address: Community Health & Preventive Medicine Morehouse School of Medicine 1513 East Cleveland Avenue, Building 500 East Point, Georgia 30344
contact_email: jgriffin@msm.edu
first_name: James P.
last_name: Griffin, Jr.
phone_number: (404) 752-1097
has_url: http://www.msm.edu/community_health/MAVPP/aboutMAVPP/JamesGriffin.aspx
curator note: Additional information has been added
contributor: http://msm.eagle-i.net/i/00000142-c445-189b-c468-451580000000
created: 2010-10-04T09:18:57.477-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2014-04-28T09:59:41.009-05:00
type: person

RNeasy mini kit
resource_description: Used for RNA purification.
workflow state: Published
related_technique: purification
curator note: bioqa
located_in: Functional Genomics Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2010-10-04T11:08:02.268-05:00
creator: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
modified: 2011-04-28T11:25:50.126-05:00
type: reagent

RiboAmp HS RNA amplification kit
workflow state: Published
related_technique: nucleic acid amplification
curator note: NV: Filled term request // bioqa: changed type - this is a kit, not a nucleic acid reagent
located_in: Functional Genomics Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2010-10-04T11:14:22.063-05:00
creator: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
modified: 2011-05-03T17:44:58.824-05:00
type: nucleic acid reagent

anti-TBX5 (H-70)
eagle-i_synonym: anti-T-box 5
Comments: Recognizes_species Homo sapiens Mus musculus
workflow state: Published
has_contact: Anderson, Leonard, Ph.D.
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc82-0c5e-ecc6-81a580000000
has_url: http://www.scbt.com/datasheet-48782-tbx5-h-70-antibody.html
related_technique: western blot analysis
recognizes_species: http://msm.eagle-i.net/i/0000012f-2848-3c9d-38fa-ed3d80000000
recognizes_species: http://msm.eagle-i.net/i/0000012f-2849-3aec-38fa-ed3d80000000
has_immunogenic_material: Amino acids 258-327 mapping within an internal region of TBX5
has_isotype: IgG
derives_from_organism: Oryctolagus cuniculus
has_antibody_registry_ID: AB_2200824
has_catalog_number: sc-48782
has_antibody_target: T-box 5
related_immunotechnique: western blot analysis
located_in: Leonard Anderson Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2010-11-08T13:54:15.271-06:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2013-08-12T14:30:21.382-05:00
type: polyclonal antibody reagent

Per2-Luciferase knock-in mouse
resource_description: This mouse expresses a fusion protein involving the circadian clock gene Period 2, and firefly luciferase. In the presence of the substrate luciferin, cultured tissue from this mouse emits light in proportion to the presence of Per2, dynamically over time. This is used as an index of circadian clock status in the tissue. Homozygous on a C57BL/6 background.
eagle-i_synonym: Per2-luc knock-in
eagle-i_synonym: Period2-luc knock-in
eagle-i_synonym: Period2-luciferase knock-in
Comments: OTTO KURATOR: converted value of property: http://purl.obolibrary.org/obo/ERO_0000578 to embedded instance. The literal value was: Expresses firefly luciferace in all regions of endogenous period 2 expression
workflow state: Published
has_contact: Davidson, Alec J., Ph.D.
has_parental_strain_name: C57BL/6
has_sequence_alteration: Per2-Luciferase knockin
ERO_0000576: 8864
has_phenotype_annotation: Expresses firefly luciferace in all regions of endogenous period 2 expression
curator note: bioqa
located_in: A. Davidson Laboratory
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2010-11-22T14:25:51.256-06:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-09-14T18:13:17.087-05:00
type: Mus musculus

Davidson, Alec J., Ph.D.
workflow state: Published
contact_email: adavidson@msm.edu
first_name: Alec J.
last_name: Davidson
title: Assistant Professor
has_url: http://www.msm.edu/research/research_centersandinstitutes/NI/facultystaff/Alec_Davidson.aspx
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
contributor: http://msm.eagle-i.net/i/0000012d-6123-ab8b-392d-ee1480000000
created: 2010-11-22T14:18:28.309-06:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2012-03-21T15:27:14.063-05:00
type: person

Per2-Luciferase knockin
eagle-i_synonym: Period2-Luciferase fusion
workflow state: Published
has_gene_symbol: 18627
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2010-11-22T14:20:57.907-06:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-09-14T18:12:33.079-05:00
type: transgenic_insertion

anti-dimethyl-Histone H3 (Lys 79)
workflow state: Published
has_contact: Anderson, Leonard, Ph.D.
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc7b-5919-ecc6-81a580000000
has_accession_number: JBC1355859
has_url: http://www.millipore.com/catalogue/item/04-835
related_technique: protein interaction detection
related_technique: chromatin immunoprecipitation
related_technique: western blot analysis
recognizes_species: http://msm.eagle-i.net/i/0000012f-2849-3aec-38fa-ed3d80000000
has_immunogenic_material: KLH-conjugated synthetic peptide containing the sequence DFme2KTD corresponding to dimethyl-lysine at position 79 of histone H3.
has_isotype: IgG
derives_from_organism: Oryctolagus cuniculus
has_antibody_registry_ID: AB_1587126
has_clone_ID: NL59
has_catalog_number: 04-835
has_antibody_target: Histone H3
related_immunotechnique: protein interaction detection
related_immunotechnique: chromatin immunoprecipitation
related_immunotechnique: western blot analysis
curator note: Recognizes_species Homo sapiens
located_in: Leonard Anderson Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2010-11-22T14:58:56.993-06:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2013-08-12T14:40:23.360-05:00
type: monoclonal antibody reagent

anti-Phosphoserine
resource_description: Monoclonal anti-Phosphoserine reacts against phosphorylated serine both as free amino acid or when conjugated to carriers such as BSA or KLH. No cross-reactivity is observed with non-phosphorylated serine, phosphothreonine, phosphotyrosine, AMP or ATP.
eagle-i_synonym: [PSR-45] to Phosphoserine 45
workflow state: Published
has_contact: Anderson, Leonard, Ph.D.
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc66-7fce-ecc6-81a580000000
has_url: http://www.abcam.com/Phosphoserine-antibody-PSR-45-ab6639.html
related_technique: ELISA
related_technique: western blot analysis
has_immunogenic_material: Phospho-serine conjugated to KLH
has_isotype: IgG1
derives_from_organism: Mus musculus
has_antibody_registry_ID: AB_305611
has_catalog_number: ab6639
has_antibody_target: Phosphorylated serine
related_immunotechnique: ELISA
related_immunotechnique: western blot analysis
located_in: Leonard Anderson Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2010-11-29T14:08:29.879-06:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2013-08-12T14:31:16.162-05:00
type: monoclonal antibody reagent

Liu, Dong, M.D., Ph.D.
workflow state: Published
contact_email: dliu@msm.edu
first_name: Dong
last_name: Liu
phone_number: (404) 756-8916
title: Research Instructor, Cardiovascular Research Institute & Department of Physiology
has_url: http://www.msm.edu/research/research_centersandinstitutes/cvri/research_cni_cardio_facultystaff/Dong_Liu.aspx
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012d-6123-ab8b-392d-ee1480000000
created: 2010-12-13T13:38:43.649-06:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2012-03-21T15:19:51.143-05:00
type: person

anti-HIF1 alpha
resource_description: ChIP grade
Comments: Recognizes_species Gallus gallus Mus musculus
workflow state: Published
has_contact: Liu, Dong, M.D., Ph.D.
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc66-7fce-ecc6-81a580000000
has_url: http://www.abcam.com/hif1-alpha-antibody-chip-grade-ab2185.html
related_technique: western blot analysis
recognizes_species: http://msm.eagle-i.net/i/0000012f-2848-3c9d-38fa-ed3d80000000
recognizes_species: http://msm.eagle-i.net/i/0000012f-284a-d393-38fa-ed3d80000000
has_immunogenic_material: Synthetic peptide, corresponding to amino acids 432-528
has_isotype: IgG
derives_from_organism: Oryctolagus cuniculus
has_antibody_registry_ID: AB_302883
has_catalog_number: ab2185
has_antibody_target: Hypoxia inducible factor 1, alpha subunit
related_immunotechnique: western blot analysis
located_in: Liu Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2010-12-13T14:03:05.404-06:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2013-08-12T14:32:53.780-05:00
type: polyclonal antibody reagent

Liu Laboratory
resource_description: "Being overweight or obese increases the risk of the development of many diseases such as diabetes and cardiovascular diseases. It is known that the proliferation, differentiation and apoptosis of preadipocytes are all related to the hyperplasia of adipose tissue. Mitochodrial biogenesis has been reported to accompany with brown and white adipose cell differentiation. Prohibitins are highly conserved proteins mostly locating in mitochondria and play important roles in the proliferation, differentiation and apoptosis in a lot of different types of cells. One of the interests in Dr. Liu's laboratory is focused on the role of prohibitins during adipogenesis. The emerging field of regenerative medicine will require a reliable and accessible source of stem cells in addition to biomaterial scaffolds and cytokine growth factors. Adipose-derived stem cells have demonstrated very similar phenotypic and functional characteristics to that of bone marrow-derived mesenchymal stem cells with the ability to differentiate along multiple lineage pathways besides adipocyte. Another interest in Dong Liu's laboratory is to define the role of prohibitins in regenerative capacity of adult stem cells by testing the effect of prohibitins on adipose-derived stem cells differentiation into cardiomyocytes, endothelial cells and smooth muscle cells."
workflow state: Published
has_contact: Liu, Dong, M.D., Ph.D.
mailing_address: Morehouse School of Medicine 720 Westview Drive Atlanta, GA 30310
contact_email: dliu@msm.edu
phone_number: (404) 756-8916
lab_delivery_address: Morehouse School of Medicine 720 Westview Drive Atlanta, GA 30310
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2010-12-13T14:02:54.903-06:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-04-13T15:42:19.490-05:00
type: Laboratory

anti-PDC6I
Comments: Recognizes_species Homo sapiens
workflow state: Published
has_contact: Liu, Dong, M.D., Ph.D.
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc66-7fce-ecc6-81a580000000
has_url: http://www.abcam.com/PDC6I-antibody-ab88743.html
related_technique: western blot analysis
recognizes_species: http://msm.eagle-i.net/i/0000012f-2849-3aec-38fa-ed3d80000000
has_immunogenic_material: Full length protein (AAH20066)
has_isotype: IgG
derives_from_organism: Mus musculus
has_antibody_registry_ID: AB_2042597
has_catalog_number: ab88743
has_antibody_target: PDCD6IP programmed cell death 6 interacting protein
related_immunotechnique: western blot analysis
located_in: Liu Laboratory
recognizes product of gene: 10015
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2010-12-13T15:00:57.537-06:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2013-08-12T14:33:35.945-05:00
type: polyclonal antibody reagent

Bacanamwo, Methode, Ph.D.
workflow state: Published
contact_email: mbacanamwo@msm.edu
first_name: Methode
last_name: Bacanamwo
phone_number: (404)752-1159
title: Assistant Professor
has_url: http://www.msm.edu/research/research_centersandinstitutes/cvri/research_cni_cardio_facultystaff/Methode_Bacanamwo.aspx
curator note: NV: Deleted additional lab- is now displaying broken link. Deleted MSM organization- now also displaying as a broken link.
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012d-6123-ab8b-392d-ee1480000000
created: 2010-12-15T14:44:39.021-06:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2012-03-21T15:23:42.148-05:00
type: person

B6;129S-Dnmt1{tm1Jae/J}
resource_description: This mouse is heterozygous for Dnmt1 mutation. It's cryopreserved at Jackson Lab. "Mice homozygous for this mutation die at mid-gestation. The embryos are stunted and show a delayed development. DNA from these mice shows a reduction in the level of m5C to about 1/3 that seen in cells from normal wild type siblings." (http://jaxmice.jax.org/strain/002123.html)
eagle-i_synonym: DNA (Cytosine-5-)-Methyltransferase 1 knockout
eagle-i_synonym: Dnmt1-KO
workflow state: Published
has_contact: Bacanamwo, Methode, Ph.D.
has_sequence_alteration: Dnmt1
ERO_0000576: 1786
located_in: Methode Bacanamwo Laboratory
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
contributor: http://msm.eagle-i.net/i/0000012b-ab2f-5b72-33cc-336680000000
created: 2010-12-15T14:52:07.552-06:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-09-14T18:16:16.217-05:00
type: Mus musculus

Methode Bacanamwo Laboratory
workflow state: Published
has_contact: Bacanamwo, Methode, Ph.D.
has_PI: Bacanamwo, Methode, Ph.D.
contact_email: mBacanamwo@msm.edu
phone_number: (404)752-1038
has_url: http://www.msm.edu/research/research_centersandinstitutes/research_cni_cardio/research_cni_cardio_facultystaff/Methode_Bacanamwo.aspx
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2010-12-15T14:48:57.206-06:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-04-06T17:54:37.330-05:00
type: Laboratory

C3H/HeJ
resource_description: Training/breeding animals. A protocol transfer form must accompany any animal requests.
workflow state: Published
related_technique: mouse breeding
curator note: Manually entered from original excel form. NV: Added technique.
located_in: Center of Laboratory Animal Resources
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-01-07T15:28:50.379-06:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
modified: 2011-11-30T15:28:09.249-06:00
type: Mus musculus

C57BL/6
resource_description: Training/breeding animals. A protocol transfer form must accompany any animal requests.
workflow state: Published
curator note: Manually entered from original Excel form.
located_in: Center of Laboratory Animal Resources
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2011-01-07T15:44:36.948-06:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
modified: 2011-01-07T15:57:56.633-06:00
type: Mus musculus

Sprague Dawley rat
resource_description: Training/breeding animals. A protocol transfer form must accompany any animal requests.
workflow state: Published
curator note: Manually entered from original excel form.
located_in: Center of Laboratory Animal Resources
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2011-01-07T15:57:31.818-06:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
modified: 2011-01-07T15:57:56.738-06:00
type: Rattus norvegicus

A. Davidson Laboratory
resource_description: "Nearly all biological functions, in nearly all organisms, are organized in the time domain. The daily appearance and disappearance of environmental light during evolution provided a framework within which animals could consolidate their activity and rest periods. The timing of behavior and other physiological activity is internalized, and is under the control of internal biological clocks called circadian oscillators. In my lab, using mouse models, we strive to understand how these rhythms are controlled by the master oscillator in the brain, called the SCN. We also try to understand the consequences of disrupting the normal temporal harmony in the organism. For example, shift work is common in our society, and carries with it numerous health consequences such as increased rates of cancer. Our animal models simulate such lifestyles, and our studies are designed to determine exactly what is causing disease in these environments, and how this can be prevented."
workflow state: Published
has_contact: Davidson, Alec J., Ph.D.
has_contact: Evans, Jennifer A., Ph.D.
has_contact: Castanon-Cervantes, Oscar, Ph.D
has_PI: Davidson, Alec J., Ph.D.
contact_email: adavidson@msm.edu
phone_number: (404) 752-1703
has_url: http://www.msm.edu/research/research_centersandinstitutes/research_cni_NI/reserach_cni_NI_facultystaff/Alec_Davidson.aspx
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2011-01-19T14:42:03.551-06:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2012-01-04T17:33:13.533-06:00
type: Laboratory

Evans, Jennifer A., Ph.D.
workflow state: Published
contact_email: jevans@msm.edu
first_name: Jennifer A.
last_name: Evans
phone_number: (404) 752-1561
title: Research Associate
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2011-01-19T14:37:56.767-06:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-03-29T09:27:11.841-05:00
type: person

Castanon-Cervantes, Oscar, Ph.D
workflow state: Published
contact_email: ocastanon-cervantes@msm.edu
first_name: Oscar
last_name: Castanon-Cervantes
title: Lab Manager
title: Research Associate
contributor: http://msm.eagle-i.net/i/00000142-c445-189b-c468-451580000000
created: 2011-01-19T14:38:35.317-06:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2014-04-24T10:57:43.836-05:00
type: person

J. Hibbert Laboratory
resource_description: "Dr. Hibbert’s primary research focus is nutritional implications of altered metabolism in sickle cell disease (SCD). Dr. Hibbert’s research projects include: protein, energy and hemoglobin metabolism in stable SCD patients; relationship of metabolic alterations, nutritional status and immune response in SCD; potential health benefits of nutritional supplements in SCD patients and transgenic mouse model; genetic modifiers of SCD severity focusing on pathways for energy and protein metabolism and proinflammatory factors, using stored human plasma and DNA; temporal changes of proinflammatory markers in tissues and effect of L-arginine supplement using the SCD transgenic mouse. Dr. Hibbert collaborates with Dr. Stiles, Dr. Gee and Dr. Newman at MSM and with colleagues at Emory University and Medical College of Georgia."
workflow state: Published
has_contact: http://msm.eagle-i.net/i/0000012e-780a-18bc-0e5d-6ffe80000000
has_PI: http://msm.eagle-i.net/i/0000012e-780a-b503-0e5d-6ffe80000000
contact_email: jhibbert@msm.edu
phone_number: (404) 752-1737
lab_delivery_address: 720 Westview Dr. SW Atlanta, GA 30310-1045
performs: blood sampling
has_url: http://www.msm.edu/academic/microbiology/postDocTraining/faculty/Jacqueline_Hibbert.aspx
contributor: http://msm.eagle-i.net/i/0000012e-c4aa-10b4-aeaf-df9880000000
created: 2011-01-25T13:14:41.738-06:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2014-05-13T10:29:11.791-05:00
type: Laboratory

Townes mouse model
resource_description: Sickle cell disease (SCD) is the result of a change in the amino acid composition (mutation) of one or both beta hemoglobin genes. These are transgenic mice that have a knockin of all the human globin genes.
eagle-i_synonym: SCD transgenic mouse
eagle-i_synonym: Sickle cell disease transgenic mouse
Comments: OTTO KURATOR: converted value of property: http://purl.obolibrary.org/obo/ERO_0000578 to embedded instance. The literal value was: C57Bl/6
workflow state: Published
has_sequence_alteration: Homo sapien beta globin
has_sequence_alteration: Homo sapien alpha globin
has_phenotype_annotation: C57Bl/6
located_in: J. Hibbert Laboratory
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-01-25T13:21:57.474-06:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-05-25T19:56:35.180-05:00
type: Mus musculus

Berkeley knockout model
resource_description: Berkeley knockout model is a complete knockout of murine alpha and beta globins followed by insertion of a transgene containing human alpha, beta, A gamma, G gamma globins.
eagle-i_synonym: SCD transgenic mouse model
eagle-i_synonym: Transgenic Sickle cell mouse model
Comments: Related disease aand Biological process studied fields do not allow new term request- "Sicle cell disease"
workflow state: Published
model_of: Anemia, Sickle Cell
has_parental_strain_name: 5 parental strains including: C57Bl/6, 129, FVB/N, DBA/2, and Black Swiss
has_sequence_alteration: Alpha globin knockout
has_sequence_alteration: Beta globin knockout
has_sequence_alteration: Homo sapiens G gamma globin
has_sequence_alteration: Homo sapiens alpha globin
has_sequence_alteration: Homo sapiens A gamma globin
has_sequence_alteration: Homo sapiens beta globin
located_in: J. Hibbert Laboratory
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-01-27T10:22:04.958-06:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-09-14T18:15:21.588-05:00
type: Mus musculus

Dnmt1
workflow state: Published
has_entrez_gene_id: 1786
has_gene_symbol: Dnmt1
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-02-11T12:30:12.287-06:00
creator: http://msm.eagle-i.net/i/0000012b-ab2f-5b72-33cc-336680000000
modified: 2011-04-29T18:31:11.914-05:00
type: deletion

Electron Microscopy Laboratory
resource_description: "Established in 1985, the RCMI Electron Microscopy Core facility provides complete scanning and transmission services, from specimen fixation/dehydration/critical point drying/ embedding/polymerization/ block trimming/sectioning/slide-making/formvar-coating, to examination and documentation of prepared samples utilizing JEOL 820 scanning and JEOL 1200EX transmission electron microscopes."
eagle-i_synonym: Electron Microscopy Core
has add access: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
Edit Token: http://msm.eagle-i.net/i/0000012f-ad90-eef1-df00-15fb80000000
Edit Token: http://msm.eagle-i.net/i/00000142-c41b-937f-c468-451580000000
has remove access: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
workflow state: Published
has_contact: Brako, Lawrence
mailing_address: 720 Westview Drive SW Atlanta, GA 30310-1495
contact_email: lbrako@msm.edu
phone_number: 404-752-1688
lab_delivery_address: 720 Westview Drive SW Atlanta, GA 30310-1495
has_affiliation: Image Analysis Core Laboratory
has_affiliation: Research Centers in Minority Institutions (RCMI), Morehouse School Of Medicine
has_affiliation: Molecular Histology Core Laboratory
has_affiliation: Flow Cytometry & Cell Sorting Laboratory
has_affiliation: Cell and Tissue Imaging Core
performs: Examination and documentation service
has_url: http://www.msm.edu/research/research_centersandinstitutes/RCMI/coreFacilities/celltissueimaging/coreElectron.aspx
has_director: Lo, Woo-Kuen, Ph.D.
contributor: http://msm.eagle-i.net/i/00000142-c445-189b-c468-451580000000
created: 2011-02-14T12:05:20.911-06:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2014-04-25T13:20:57.693-05:00
type: Core Laboratory

Lo, Woo-Kuen, Ph.D.
workflow state: Published
contact_email: wlo@msm.edu
first_name: Woo-Kuen
last_name: Lo
phone_number: (404) 752-1558
title: Electron Microscopy Core Leader
title: Professor, Department of Neurobiology
performs: electron microscopy
has_url: http://www.msm.edu/academic/pathology/pathology_faculty/Woo-Kuen_Lo.aspx
contributor: http://msm.eagle-i.net/i/00000142-c445-189b-c468-451580000000
created: 2011-02-14T12:04:44.661-06:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2014-04-25T13:21:00.052-05:00
type: person

Brako, Lawrence
profiles_url: http://t1t2.rtrn.net/profileswebroot/ProfileDetails.aspx?From=SE&Person=63370&PersonSource=Morehouse%20School%20of%20Medicine
has add access: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
has remove access: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
workflow owner: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
workflow state: Published
mailing_address: 720 Westview Drive SW Atlanta, GA 30310-1495
contact_email: lbrako@msm.edu
first_name: Lawrence
last_name: Brako
phone_number: (404) 752-1688
title: Lab Technician
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
created: 2011-02-14T12:11:06.379-06:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2013-12-04T12:59:03.395-06:00
type: person

Examination and documentation service
Fee for service: true
resource_description: "Examination and documentation of prepared specimens utilizing Transmission and/or Scanning Electron Microscope."
workflow state: Published
provides_access_to: JEOL JSM-820
provides_access_to: JEOL JEM-1200EX
has_restriction: Limited to Morehouse School of Medicine and neighboring institutions.
service_provided_by: Electron Microscopy Laboratory
is_performed_by: Electron Microscopy Laboratory
has_url: http://www.msm.edu/research/research_centersandinstitutes/RCMI/coreFacilities/celltissueimaging/coreElectron.aspx
related_technique: electron microscopy
related_technique: transmission electron microscopy
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
contributor: http://msm.eagle-i.net/i/0000012d-6123-ab8b-392d-ee1480000000
created: 2011-02-14T12:13:30.596-06:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-05-02T12:12:39.397-05:00
type: material analysis service

Powell, Michael D., Ph.D.
resource_description: "Our lab is interested in the molecular pathogenesis of HIV/AIDS. Our current projects focus on the role that the viral protein Nef plays in AIDS pathogenesis. We have found that the Nef protein is secreted from infected cells in small membrane-bound packages called "exosomes." These exosomes can fuse with non-infected cells and cause a variety of effects, including programmed cell death. Nef exosomes are also present in the plasma of HIV infected individuals. In collaboration with Dr. Vincent Bond at Morehouse School of Medicine, we are exploring the possibility that Nef exosomes could represent a major source of the T cell depletion, a hallmark of HIV/AIDS. We are currently testing this hypothesis in non-human primates and strategies are currently being devised to develop therapeutic vaccines and anti-virals based on this model. Our lab also provides Luminex assays, mass spectrometry and Proteomics services for the school. Those interested in initiating a project with the Proteomics core should contact Dr. Powell."
workflow state: Published
mailing_address: 720 Westview Drive SW Atlanta, GA 30310-1495
contact_email: mpowell@msm.edu
first_name: Michael D.
last_name: Powell
phone_number: (404) 752-1582
title: Associate Professor, Department of Microbiology, Biochemistry & Immunology
has_url: http://www.msm.edu/academic/microbiology/faculty/Michael_Powell.aspx
curator note: Member of broken link goes back to a deleted record for Morehouse School of Medicine. Cannot manually remove from field. Does not need to be replaced, as MSM was created in error.
contributor: http://msm.eagle-i.net/i/00000142-c445-189b-c468-451580000000
created: 2011-02-14T13:05:55.470-06:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2014-04-28T10:35:29.391-05:00
type: person

Proteomics Laboratory
resource_description: Proteins can be identified by trypsin digestion and analysis of peptides by LC/MS/MS. Samples can be bands or spots from 1D or 2D gel electrophoresis or solutions of moderate complexity. Expression analysis can be done using ProteoIQ software to compare samples. Pathways analysis can be done to identifity biological processes and relationships. Analysis of protein translational modifications PTMs can also be done.
workflow state: Published
has_contact: Powell, Michael D., Ph.D.
has_PI: Bond, Vincent C., Ph.D.
mailing_address: 720 Westview Drive SW Atlanta, GA 30310-1495
lab_delivery_address: 720 Westview Drive SW Atlanta, GA 30310-1495
has_affiliation: Analytical Chemistry & Protein Profiling Core
has_url: http://www.msm.edu/research/research_centersandinstitutes/RCMI/coreFacilities/analyticalchemistry.aspx
has_director: Powell, Michael D., Ph.D.
has_organization_member: Chu, Jane
contributor: http://msm.eagle-i.net/i/00000142-c445-189b-c468-451580000000
created: 2011-02-14T13:08:58.364-06:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2014-04-28T10:14:47.245-05:00
type: Core Laboratory

Protein identification
resource_description: "Surface enhanced laser desorption ionization (SELDI) can be used in several different kinds of applications which include, but are not limited to: 1. Protein profiling and Biomarker discovery. 2. Protein-Protein interactions. 3. Protein-Nucleic acid interactions. 4. Identification of proteins by tryptic digest. 5. Determination of the protein properties prior to purification."
workflow state: Published
service_provided_by: Proteomics Laboratory
is_performed_by: Proteomics Laboratory
has_url: http://www.msm.edu/research/clinicalCore_facilities/facilities_SELDI.aspx
related_technique: protein identification
related_technique: mass spectrometry assay
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012d-6123-ab8b-392d-ee1480000000
created: 2011-02-14T13:25:42.587-06:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-04-13T13:33:04.630-05:00
type: material analysis service

Luminex service
resource_description: Use of Luminex instrument for multi-analytic detection. The Bio-Plex and Miliplex Assay services are offered by the Proteomics core.
workflow state: Published
has_contact: Powell, Michael D., Ph.D.
has_contact: Chu, Jane
provides_access_to: Luminex analyzer
provides_access_to: Bio-Plex 200 system
provides_access_to: Bio-Plex Manager
service_provided_by: Analytical Chemistry Laboratory
service_provided_by: Proteomics Laboratory
is_performed_by: Proteomics Laboratory
has_url: http://www.msm.edu/research/clinicalCore_facilities/facilities_SELDI.aspx
has_url: http://www.msm.edu/research/research_centersandinstitutes/RCMI/coreFacilities/analyticalchemistry/coreProtein.aspx
related_technique: cellular assay
related_technique: liquid chromatography-mass spectrometry
curator note: NV: Filled term request
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-02-14T13:33:29.292-06:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-09-14T18:19:24.894-05:00
type: access service

Proteome Discoverer
resource_description: "Thermo Scientific* Proteome Discoverer software is a flexible, expandable platform for the analysis of qualitative and quantitative proteomics data. Outstanding sensitivity and the rapid growth of public databases have made mass spectrometry the primary method of identifying proteins in complex biological samples. While database search algorithms such as SEQUEST* and MASCOT* have existed for over a decade to facilitate the identification of proteins from mass spectral data, the field of proteomics continues to expand and with it the need for more advanced and flexible software tools to interpret the data. Proteome Discoverer was designed to address this need for flexibility by offering a wide array of bio-software tools and customizable workflows for every proteomics experiment."
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc86-3932-ecc6-81a580000000
used_by: Proteomics Laboratory
version: 2.2
has_url: http://www.thermoscientific.com/ecomm/servlet/productsdetail?storeId=11152&langId=-1&productId=11961811
related_technique: protein identification
has_software_license: Proprietary commercial software license
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-02-14T13:43:34.909-06:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-04-27T18:27:49.186-05:00
type: software

Synthetic peptide, corresponding to amino acids 432-528
has_entrez_gene_id: http://www.ncbi.nlm.nih.gov/gene/3091
has_gene_symbol: HIF1A
type: immunogenic material

Leonard Anderson Laboratory
workflow state: Published
has_contact: Anderson, Leonard, Ph.D.
has_PI: Anderson, Leonard, Ph.D.
mailing_address: Research Wing, Room 222 720 Westview Drive., S.W. Atlanta, GA 30310-1495
contact_email: landerson@msm.edu
phone_number: (404) 756-8920
lab_data_format: Quartzy
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
contributor: http://msm.eagle-i.net/i/0000012d-7665-2907-9b30-a5a880000000
created: 2011-02-22T11:26:36.800-06:00
creator: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
modified: 2011-04-22T14:03:25.745-05:00
type: Laboratory

anti-Caspase 3, active (cleaved) form
eagle-i_synonym: anti-Apopain
Comments: Recognizes_species Homo sapiens Oryctolagus cuniculus Mus musculus
has add access: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
has remove access: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc7b-5919-ecc6-81a580000000
has_url: http://www.millipore.com/catalogue/item/ab3623
related_technique: immunohistochemistry assay
related_technique: immunofluorescence microscopy assay
related_technique: western blot analysis
recognizes_species: http://msm.eagle-i.net/i/0000012f-2847-709b-38fa-ed3d80000000
recognizes_species: http://msm.eagle-i.net/i/0000012f-2848-3c9d-38fa-ed3d80000000
recognizes_species: http://msm.eagle-i.net/i/0000012f-2849-3aec-38fa-ed3d80000000
has_immunogenic_material: Caspase 3
derives_from_organism: Oryctolagus cuniculus
has_antibody_registry_ID: AB_91556
has_catalog_number: AB3623
has_antibody_target: Caspase 3, active (cleaved) form
related_immunotechnique: immunohistochemistry assay
related_immunotechnique: immunofluorescence microscopy assay
related_immunotechnique: western blot analysis
located_in: Leonard Anderson Laboratory
contributor: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
created: 2011-02-24T10:09:28.127-06:00
creator: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
modified: 2013-12-04T15:42:42.883-06:00
type: polyclonal antibody reagent

Caspase 3
has_entrez_gene_id: 836
type: immunogenic material

anti-IRX1
eagle-i_synonym: Iroquois homeobox protein 1
Comments: Recognizes_species Homo sapiens
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc69-9335-ecc6-81a580000000
has_url: http://www.avivasysbio.com/irx1-iroquois-homeobox-protein-1-antibody-against-the-n-terminal-of-irx1-100ug-18374.html
related_technique: western blot analysis
recognizes_species: http://msm.eagle-i.net/i/0000012f-2849-3aec-38fa-ed3d80000000
has_immunogenic_material: N-terminus of IRX1
derives_from_organism: Oryctolagus cuniculus
has_antibody_registry_ID: AB_842264
has_catalog_number: ARP33572_T100
has_antibody_target: Iroquois homeobox protein 1
related_immunotechnique: western blot analysis
located_in: Leonard Anderson Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-02-24T10:12:01.470-06:00
creator: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
modified: 2013-07-11T16:39:04.283-05:00
type: polyclonal antibody reagent

N-terminus of IRX1
has_entrez_gene_id: http://www.ncbi.nlm.nih.gov/gene/79192
derives_from_organism_or_virus: Homo sapiens
type: immunogenic material

anti-Irx4
Comments: Recognizes_species Homo sapiens Mus musculus
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc86-3932-ecc6-81a580000000
has_url: http://www.antibodydirectory.com/moreinfos.php?Item=157645
related_technique: immunohistochemistry assay
related_technique: immunofluorescence microscopy assay
related_technique: western blot analysis
recognizes_species: http://msm.eagle-i.net/i/0000012f-2848-3c9d-38fa-ed3d80000000
recognizes_species: http://msm.eagle-i.net/i/0000012f-2849-3aec-38fa-ed3d80000000
has_immunogenic_material: Synthetic Irx4 peptide based on the sequence: PHSGALDRHQDSPVTSL
has_isotype: IgG
derives_from_organism: Oryctolagus cuniculus
has_antibody_registry_ID: AB_559727
has_catalog_number: PA1-17055
has_antibody_target: Iroquois homeobox 4
related_immunotechnique: immunohistochemistry assay
related_immunotechnique: immunofluorescence microscopy assay
related_immunotechnique: western blot analysis
located_in: Leonard Anderson Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-02-24T10:22:56.846-06:00
creator: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
modified: 2013-07-11T16:38:32.267-05:00
type: polyclonal antibody reagent

Synthetic Irx4 peptide based on the sequence: PHSGALDRHQDSPVTSL
type: immunogenic material

anti-Cyclin D1
Comments: Recognizes_species Homo sapiens
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc6d-65d0-ecc6-81a580000000
has_inventory_number: Cell signaling catalog number: 2926
has_url: http://www.cellsignal.com/products/2926.html
related_technique: immunoprecipitation
related_technique: western blot analysis
recognizes_species: http://msm.eagle-i.net/i/0000012f-2849-3aec-38fa-ed3d80000000
has_immunogenic_material: Cyclin D1
has_isotype: IgG2a
derives_from_organism: Mus musculus
has_antibody_registry_ID: AB_2070400
has_clone_ID: DCS6
has_antibody_target: Cyclin D1
related_immunotechnique: immunoprecipitation
related_immunotechnique: western blot analysis
located_in: Leonard Anderson Laboratory
recognizes product of gene: 595
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-02-24T10:27:28.453-06:00
creator: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
modified: 2013-07-11T16:22:14.355-05:00
type: monoclonal antibody reagent

Cyclin D1
has_entrez_gene_id: http://www.ncbi.nlm.nih.gov/gene/595
type: immunogenic material

anti-Dimethyl-histone H3 (Lys79)
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc7b-5919-ecc6-81a580000000
has_url: http://www.millipore.com/catalogue/item/04-835#
related_technique: chromatin immunoprecipitation
related_technique: western blot analysis
recognizes_species: http://msm.eagle-i.net/i/0000012f-2849-3aec-38fa-ed3d80000000
has_immunogenic_material: Dimethyl-histone H3
has_isotype: IgG
derives_from_organism: Oryctolagus cuniculus
has_antibody_registry_ID: AB_1587126
has_clone_ID: NL59
has_catalog_number: 04-835
has_antibody_target: Histone H3
related_immunotechnique: chromatin immunoprecipitation
related_immunotechnique: western blot analysis
curator note: Recognizes_species Homo sapiens
located_in: Leonard Anderson Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-02-24T10:29:24.449-06:00
creator: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
modified: 2013-07-11T16:41:43.445-05:00
type: monoclonal antibody reagent

Dimethyl-histone H3
has_entrez_gene_id: 8290
type: immunogenic material

anti-FLAG M2
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc83-2b62-ecc6-81a580000000
has_url: http://www.sigmaaldrich.com/catalog/ProductDetail.do?lang=en&N4=F1804|SIGMA&N5=SEARCH_CONCAT_PNO|BRAND_KEY&F=SPEC
related_technique: immunohistochemistry assay
related_technique: western blot analysis
has_immunogenic_material: FLAG
derives_from_organism: Mus musculus
has_antibody_registry_ID: AB_262044
has_catalog_number: F-1804
has_antibody_target: FLAG
related_immunotechnique: immunohistochemistry assay
related_immunotechnique: western blot analysis
located_in: Leonard Anderson Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-02-24T10:32:25.227-06:00
creator: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
modified: 2013-07-12T09:41:48.711-05:00
type: monoclonal antibody reagent

FLAG
type: immunogenic material

anti-GFP
eagle-i_synonym: Living Colors A.v. Monoclonal Antibody (JL-8)
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc6e-2e92-ecc6-81a580000000
related_technique: immunoprecipitation
related_technique: western blot analysis
has_immunogenic_material: GFP
has_isotype: IgG2a
derives_from_organism: Mus musculus
has_antibody_registry_ID: AB_10013427
related_immunotechnique: immunoprecipitation
related_immunotechnique: western blot analysis
located_in: Leonard Anderson Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-02-24T10:43:31.588-06:00
creator: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
modified: 2013-07-12T09:42:07.764-05:00
type: monoclonal antibody reagent

GFP
has_entrez_gene_id: 7011691
type: immunogenic material

DNA Sequencing Laboratory
resource_description: The DNA Sequencing Lab uses the capillary electrophoresis technology developed by Applied Biosystems (ABI) to resolve fluorescently-labeled DNA on the 16-capillary ABI 3130xl Gene Analyzer. The lab offers both DNA sequencing and fragment (microsatellite) analysis to research users. Options include enumeration of polymorphisms (SNPs) in patient samples, a service which complements SNP discovery protocols offered in the Human Genotyping Lab. Instrumentation: Applied Biosystems (ABI) 3100xl Gene analyzer, ABI 9600 and Veriti thermocyclers, Software: Applied Biosystems Suite – (Sequence Analysis 5.2, GeneMapper 4.0, SeqScape 2.5) Service Charges: DNA Sequencing: $5/sequencing reaction (MSM), (reaction and electrophoresis) $6/reaction (non-MSM) Large-user sequencing discount $4/reaction (MSM) (full 96-well plate) $5/reaction (non-MSM) DNA Fragment Analysis: $1.50 per sample (MSM) (electrophoresis only) $2 per sample (non-MSM)
workflow state: Published
has_contact: Roth, William
has_contact: Yang, Qi
mailing_address: Room B-315C, Hugh Gloster Bldg. Morehouse School of Medicine 720 Westview Drive, SW Atlanta, GA 30310-1495
contact_email: qiyang@msm.edu
contact_email: wroth@msm.edu
phone_number: (404) 752-1866
phone_number: (404) 752-1947
lab_data_format: Sequence trace file
lab_delivery_address: Room C-241, Medical Education Bldg. Morehouse School of Medicine 720 Westview Drive, SW Atlanta, GA 30310-1495
has_affiliation: Gene Profiling Core
performs: DNA sequencing
has_url: http://www.msm.edu/research/research_centersandinstitutes/RCMI/coreFacilities/geneprofiling/dnasequencing.aspx
has_url: https://rcenterportal.msm.edu/node/38
has_director: Roth, William
contributor: http://msm.eagle-i.net/i/00000142-c445-189b-c468-451580000000
created: 2011-02-24T13:54:28.080-06:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2014-04-25T13:24:19.464-05:00
type: Core Laboratory

Roth, William
workflow state: Published
mailing_address: Morehouse School of Medicine 720 Westview Drive Atlanta, GA 30310-1495
contact_email: wroth@msm.edu
first_name: William
last_name: Roth
phone_number: (404) 752-1947
title: Core Leader, DNA Sequencing Lab
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2011-02-24T13:54:25.123-06:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-03-10T10:23:22.362-06:00
type: person

Yang, Qi
workflow state: Published
mailing_address: Morehouse School of Medicine 720 Westview Drive Atlanta, GA 30310-1495
contact_email: qiyang@msm.edu
first_name: Qi
last_name: Yang
phone_number: (404) 752-1866
title: Lab Technician
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2011-02-28T10:09:06.372-06:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-03-29T14:08:11.312-05:00
type: person

Post-Doctoral Fellowship in Hemoglobinopathy
research_opportunity_provided_by: J. Hibbert Laboratory
resource_description: Consists of a minimum of two years working with clinical and/or animal protocols. Methods include stable isotopes, protein analysis, energy expenditure and body composition.
workflow state: Published
has_eligibility_requirment: Ph.D. in biochemistry, metabolism or nutrition
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2011-03-02T13:21:49.959-06:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-05-20T14:46:30.827-05:00
type: research opportunity

Office of Technology Transfer, Morehouse School of Medicine
resource_description: "Morehouse School of Medicine’s strong emphasis on strengthening primary care, promoting prevention and early detection, and working to reduce and eliminate health disparities has made the institution a unique academic medical center in the United States – and the world. The biotechnologies developed by MSM researchers are targeted to prevent, diagnose and treat chronic diseases like HIV/AIDS and other infectious diseases, cancer, cardiovascular disease, metabolic and neurological disorders. Technology transfer will continue to be an important process for creating new and existing research and development efforts as well as a driving force for national and regional economic development."
workflow owner: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
workflow state: Published
has_contact: Harris-Hooker, Sandra, Ph.D.
mailing_address: Office of Research Administration 720 Westview Drive SW Research Wing, Room 133 Atlanta, Georgia 30310-1495
phone_number: (404) 752-1725
lab_delivery_address: Office of Research Administration 720 Westview Drive SW Research Wing, Room 133 Atlanta, Georgia 30310-1495
has_url: http://www.msm.edu/commercialization.aspx
has_director: Harris-Hooker, Sandra, Ph.D.
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2011-03-08T13:35:33.990-06:00
creator: http://msm.eagle-i.net/i/0000012d-6123-ab8b-392d-ee1480000000
modified: 2011-06-02T11:27:27.540-05:00
type: technology transfer office

Harris-Hooker, Sandra, Ph.D.
resource_description: "Sandra Harris-Hooker, Ph.D., graduated from Dillard University in New Orleans, Louisiana with a degree in Biology. She earned her Ph.D. in Developmental Biology from Atlanta University (now Clark-Atlanta University), in Atlanta, Georgia. Upon completion of her Ph.D., Dr. Harris-Hooker spent three years of postdoctoral training in the Department of Pathology at the University of Washington School of Medicine, in Seattle, Washington. After training in Seattle, she served on the faculty in the Department of Pathology at Boston University School of Medicine before joining the faculty at Morehouse School of Medicine, in Atlanta, Georgia. As a member of the faculty of Morehouse School of Medicine, Dr. Harris-Hooker is currently Vice President/Associate Dean for Sponsored Research Administration, as well as Professor in the Department of Pathology. While her primary research area is cardiovascular biology, she is also interested in ways to enhance the integration of basic, clinical and population-based research in order to address disparities in health. To further supplement her interest in addressing disparities in health, Dr. Harris-Hooker serves as Deputy Director for the Center for Excellence on Health Disparities. To bridge the gap between basic, clinical and population-based research, she belongs to a number of organizations, including the International Society on Hypertension in Blacks, the American Heart Association, and the New York Academy of Science. She is also a member of the Morehouse School of Medicine Chapter of Alpha Omega Alpha Medical Honor Society. Dr. Harris-Hooker serves on several national boards and external committees such as the National Space Biomedical Research Institute, the Association for the Accreditation of Human Research Protection Programs, Inc., the International Society of Hypertension in Blacks, and the Board of Advisors to the Jackson State University College of Science Engineering and Technology."
workflow state: Published
mailing_address: Office of Research Administration 720 Westview Drive SW Research Wing, Room 133 Atlanta, Georgia 30310-1495
contact_email: sharris-hooker@msm.edu
first_name: Sandra
last_name: Harris-Hooker
phone_number: (404) 752-1725
title: Vice President/Associate Dean, Sponsored Research Administration
has_url: http://www.msm.edu/academic/pathology/pathology_faculty/Sandra_Harris-Hooker.aspx
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-03-08T13:35:32.987-06:00
creator: http://msm.eagle-i.net/i/0000012d-6123-ab8b-392d-ee1480000000
modified: 2011-09-14T18:17:12.006-05:00
type: person

Fragment (microsatellite) analysis service
Fee for service: true
workflow state: Published
has_contact: Roth, William
has_restriction: Different fees apply for MSM and non-MSM users. See website for details.
service_provided_by: DNA Sequencing Laboratory
has_url: http://www.msm.edu/research/research_centersandinstitutes/RCMI/coreFacilities/geneprofiling/dnasequencing.aspx
related_technique: microsatellite analysis
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
contributor: http://msm.eagle-i.net/i/0000012d-6123-ab8b-392d-ee1480000000
created: 2011-03-23T15:45:36.338-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-05-02T11:58:09.079-05:00
type: material analysis service

Enumeration of polymorphisms (SNPs)
Fee for service: true
resource_description: "Expanded options include enumeration of polymorphisms (SNPs) in patient samples, a service which can be used to complement SNP discovery protocols offered in the Human Genotyping Lab."
eagle-i_synonym: Enumeration of single nucleotide polymorphisms
workflow state: Published
service_provided_by: DNA Sequencing Laboratory
has_url: http://www.msm.edu/research/research_centersandinstitutes/RCMI/coreFacilities/geneprofiling/dnasequencing.aspx
related_technique: single-nucleotide polymorphism analysis
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2011-03-23T15:59:08.519-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-05-02T10:31:45.961-05:00
type: material analysis service

New Brunswick Scientific Innova 4300
resource_description: Shaker-incubator for growth of bacterial cultures.
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc7d-0ebe-ecc6-81a580000000
model_number: Innova 4300
located_in: DNA Sequencing Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2011-03-23T16:00:56.231-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-04-13T13:03:48.307-05:00
type: incubator shaker

ABI GeneAmp 9600 PCR system
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc68-88e5-ecc6-81a580000000
model_number: GeneAmp 9600
related_technique: polymerase chain reaction
curator note: AM: Updated name, type, technique, model
located_in: DNA Sequencing Laboratory
contributor: http://msm.eagle-i.net/i/0000012e-c941-70e2-aeaf-df9880000000
created: 2011-03-23T16:01:25.566-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-07-21T14:51:50.485-05:00
type: PCR instrument

Applied Biosystems Suite
resource_description: Suite includes: * Sequence Analysis 5.2 * GeneMapper 4.0 * SeqScape 2.5 * Invitrogen Vector NTi10.3 suite * Sequencer 4.2 * Geneious 4.0.2
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc68-88e5-ecc6-81a580000000
used_by: DNA Sequencing Laboratory
related_technique: DNA sequencing
has_software_license: Proprietary commercial software license
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-03-23T16:02:20.728-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-04-27T18:24:11.311-05:00
type: software

Luminex analyzer
resource_description: Shared between two labs.
Comments: Contact Michael Powell of Jane Chu for LC-MS at the Proteomics Facility and Natalia Silvestrov for GC-MS at the Analytical Chemistry Core.
workflow state: Published
has_contact: Chu, Jane
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc79-8acd-ecc6-81a580000000
model_number: 200
has_url: http://www.luminexcorp.com/Products/Instruments/Luminex100200/index.htm
curator note: NV: Filled term request. Changed type. Removed techniques, not sure what this instrument is actually used for but according to the website, it says it's based on flow cytometry technology.
located_in: Analytical Chemistry Laboratory
located_in: Proteomics Laboratory
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-04-06T17:34:04.289-05:00
creator: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
modified: 2011-11-16T15:43:04.373-06:00
type: flow cytometer analyzer

KLH-conjugated synthetic peptide containing the sequence DFme2KTD corresponding to dimethyl-lysine at position 79 of histone H3.
type: immunogenic material

Full length protein (AAH20066)
has_entrez_gene_id: http://www.ncbi.nlm.nih.gov/gene/10015
has_gene_symbol: PDCD6IP
derives_from_organism_or_virus: Homo sapiens
type: immunogenic material

Amino acids 258-327 mapping within an internal region of TBX5
has_entrez_gene_id: http://www.ncbi.nlm.nih.gov/gene/6910
has_gene_symbol: TBX5
derives_from_organism_or_virus: Homo sapiens
type: immunogenic material

anti-E2F1
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc83-2b62-ecc6-81a580000000
has_url: http://www.sigmaaldrich.com/catalog/ProductDetail.do?lang=en&N4=E8901|SIGMA&N5=SEARCH_CONCAT_PNO|BRAND_KEY&F=SPEC
recognizes_species: http://msm.eagle-i.net/i/0000012f-2849-3aec-38fa-ed3d80000000
has_isotype: IgG2a
derives_from_organism: Mus musculus
has_antibody_registry_ID: AB_259365
has_clone_ID: KH20
has_catalog_number: E8901
has_antibody_target: E2F transcription factor 1
curator note: Recognizes_species Homo sapiens
located_in: Leonard Anderson Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-04-07T20:40:57.990-05:00
creator: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
modified: 2013-07-11T16:42:38.083-05:00
type: monoclonal antibody reagent

anti-IRX5 (A01)
eagle-i_synonym: anti-IRX-2a
eagle-i_synonym: anti-Iroquois homeobox protein 5
Comments: Recognizes_species Homo sapiens
workflow state: Published
has_contact: Anderson, Leonard, Ph.D.
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc66-933c-ecc6-81a580000000
has_url: http://www.abnova.com/products/products_detail.asp?catalog_id=H00010265-A01
related_technique: ELISA
related_technique: western blot analysis
recognizes_species: http://msm.eagle-i.net/i/0000012f-2849-3aec-38fa-ed3d80000000
has_immunogenic_material: IRX5 partial recombinant protein with GST tag
derives_from_organism: Mus musculus
has_antibody_registry_ID: AB_529847
has_catalog_number: H00010265-A01
has_antibody_target: Iroquois homeobox protein 5
related_immunotechnique: ELISA
related_immunotechnique: western blot analysis
located_in: Leonard Anderson Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-04-07T20:42:44.752-05:00
creator: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
modified: 2013-07-11T16:37:53.547-05:00
type: polyclonal antibody reagent

IRX5 partial recombinant protein with GST tag
has_entrez_gene_id: http://www.ncbi.nlm.nih.gov/gene/10265
has_gene_symbol: IRX5
derives_from_organism_or_virus: Homo sapiens
type: immunogenic material

anti-β-Actin
eagle-i_synonym: Anti-beta-Actin
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc82-0c5e-ecc6-81a580000000
has_inventory_number: sc-47778
has_url: http://datasheets.scbt.com/sc-47778.pdf
recognizes_species: http://msm.eagle-i.net/i/0000012f-2848-3c9d-38fa-ed3d80000000
recognizes_species: http://msm.eagle-i.net/i/0000012f-2849-3aec-38fa-ed3d80000000
has_immunogenic_material: Beta-actin
has_isotype: IgG1
derives_from_organism: Mus musculus
has_antibody_registry_ID: AB_626632
has_clone_ID: C4
has_antibody_target: β-Actin
curator note: Recognizes_species Homo sapiens Mus musculus
located_in: Leonard Anderson Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-04-07T20:50:09.943-05:00
creator: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
modified: 2013-07-11T16:50:35.818-05:00
type: monoclonal antibody reagent

Beta-actin
has_gene_symbol: 396526
type: immunogenic material

anti-V5
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc80-906c-ecc6-81a580000000
has_url: http://www.qedbio.com/v/pdf/18868.pdf
related_technique: immunohistochemistry assay
related_technique: immunocytochemistry
related_technique: ELISA
related_technique: western blot analysis
has_immunogenic_material: V5 coupled to KLH
derives_from_organism: Capra hircus
has_antibody_registry_ID: AB_215337
has_catalog_number: 18868
has_antibody_target: V5
related_immunotechnique: immunohistochemistry assay
related_immunotechnique: immunocytochemistry
related_immunotechnique: ELISA
related_immunotechnique: western blot analysis
located_in: Leonard Anderson Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-04-07T20:55:46.348-05:00
creator: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
modified: 2013-07-11T16:15:28.485-05:00
type: polyclonal antibody reagent

V5 coupled to KLH
type: immunogenic material

anti-Rb
eagle-i_synonym: anti-Retinoblastoma
eagle-i_synonym: anti-pp105
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc71-8aaf-ecc6-81a580000000
has_url: http://www.emdchemicals.com/is-bin/INTERSHOP.enfinity/WFS/Merck-US-Site/en_CA/-/USD/ViewPDF-Print.pdf?RenderPageType=ProductDetail&CatalogCategoryID=&ProductUUID=YrKb.s1OdvQAAAEie8xRV1.R&PortalCatalog[cell cut: 229 characters, first 200 kept]
related_technique: western blot analysis
recognizes_species: http://msm.eagle-i.net/i/0000012f-2848-3c9d-38fa-ed3d80000000
recognizes_species: http://msm.eagle-i.net/i/0000012f-2849-3aec-38fa-ed3d80000000
has_immunogenic_material: Synthetic peptide corresponding to amino acids in the middle portion of the second E1A binding domain (B pocket) of human and mouse Rb
has_isotype: IgG2a
derives_from_organism: Mus musculus
has_antibody_registry_ID: AB_565107
has_clone_ID: AF11
has_catalog_number: OP77
has_antibody_target: Retinoblastoma 1
related_immunotechnique: western blot analysis
curator note: Recognizes_species Homo sapiens Mus musculus
located_in: Leonard Anderson Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-04-07T21:00:21.171-05:00
creator: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
modified: 2013-07-11T16:46:27.245-05:00
type: monoclonal antibody reagent

Synthetic peptide corresponding to amino acids in the middle portion of the second E1A binding domain (B pocket) of human and mouse Rb
has_entrez_gene_id: http://www.ncbi.nlm.nih.gov/gene/19645
has_entrez_gene_id: http://www.ncbi.nlm.nih.gov/gene/5925
has_gene_symbol: RB1
derives_from_organism_or_virus: Homo sapiens
derives_from_organism_or_virus: Mus musculus
type: immunogenic material

anti-Phospho-Rb
eagle-i_synonym: anti-phospho-Retinoblastoma
Comments: Recognizes_species Homo sapiens Mus musculus
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc6d-65d0-ecc6-81a580000000
has_url: http://www.cellsignal.com/pdf/9308.pdf
recognizes_species: http://msm.eagle-i.net/i/0000012f-2848-3c9d-38fa-ed3d80000000
recognizes_species: http://msm.eagle-i.net/i/0000012f-2849-3aec-38fa-ed3d80000000
has_immunogenic_material: Synthetic phospho-peptide (KLH-coupled) corresponding to residues around Ser807/811 of human Rb
derives_from_organism: Oryctolagus cuniculus
has_antibody_registry_ID: AB_2177187
has_catalog_number: 9308
has_antibody_target: Retinoblastoma Associated Protein
located_in: Leonard Anderson Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-04-07T21:06:11.616-05:00
creator: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
modified: 2013-07-11T16:44:21.028-05:00
type: monoclonal antibody reagent

Synthetic phospho-peptide (KLH-coupled) corresponding to residues around Ser807/811 of human Rb
has_entrez_gene_id: http://www.ncbi.nlm.nih.gov/gene/5925
has_gene_symbol: RB1
derives_from_organism_or_virus: Homo sapiens
type: immunogenic material

Copyright registration service
resource_description: The Tech Transfer office provides registration for: * Literary work * Visual arts work * Performing arts work * Sound recording * Single serial issue * Motion picture or other audiovisual work
workflow state: Published
service_provided_by: Office of Technology Transfer, Morehouse School of Medicine
has_url: http://www.msm.edu/Libraries/Docs_Other/Copyright_Registration.sflb.ashx
has_url: http://www.msm.edu/Libraries/Docs_Other/Copyright_Registration_Instructions.sflb.ashx
ERO_0001053: true
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2011-04-08T13:19:35.370-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-05-27T10:19:22.612-05:00
type: support service

Intellectual property disclosure service
resource_description: The Tech Transfer Office reviews invention disclosures and provides the following intellectual property services to inventors at Morehouse School of Medicine: * determine whether the disclosure represents intellectual property that is a trade secret, or whether it is an invention that would require patent protection * ascertain whether the invention disclosure can be adequately evaluated by the intellectual property committee or whether to defer evaluation to an external intellectual property management agency * institute action to protect the disclosed invention as intellectual property of Morehouse School of Medicine * transfer intellectual property rights of the described disclosure to the research sponsor, if such transfer is required by the research agreement * waive ownership of the intellectual property rights regarding the disclosed technology in favor of the inventor and release the inventor from further responsibility to the university with respect to the technology that was disclosed * request additional pertinent information needed for the committee to evaluate the disclosure. In such circumstances, the committee shall deem the disclosure "not adequate" and the calculation of the time frames shall not begin until the requested information is received by the committee"
workflow state: Published
service_provided_by: Office of Technology Transfer, Morehouse School of Medicine
has_url: http://www.msm.edu/commercialization/commercialization_propertyCommittee.aspx
ERO_0001053: true
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2011-04-08T13:21:50.645-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-05-27T15:20:40.410-05:00
type: support service

Technology licensing service
resource_description: The Tech Transfer Office can provide licenses for the following commercialization opportunities: * TUMOR CYTOTOXICITY INDUCED BY MODULATORS OF THE CXCR4 RECEPTOR - "This invention relates to the use of Gp120 and Nef proteins of retroviruses, or peptides of these proteins, as therapeutic agents against carcinomas." * METHOD FOR IDENTIFYING SALT-SENSITIVE PERSONS - "This invention relates to evaluation of salt sensitivity as it relates to propensity to present or develop hypertension." * ANTI –CHEMOKINE AND –ASSOCIATED RECEPTOR ANTIBODIES AND USES FOR INHIBITION OF INFLAMMATION - "This invention relates to antibodies or the use of antibodies, against precise chemokines or chemokine receptors, that mediate certain inflammatory diseases, e.g., chronic obstructive pulmonary disease (COPD), inflammatory bowel disease (IBD), interstitial cystitis." * ANTI –CHEMOKINE AND –ASSOCIATED RECEPTOR ANTIBODIES AND USES FOR INHIBITION OF CANCER GROWTH AND METASTASIS - "This invention relates to antibodies or the use of antibodies, against precise chemokines or chemokine receptors, to provide a means of inhibiting the growth and/or metastasis of tumor cells." * TRYPANOSOME DERIVED APOPTOTIC FACTORS (TAF) - "This invention relates to the use of anti-TAF monoclonal antibody to inhibit cell death of microvascular endothelial, brain and other cells. It is the purpose of this invention to provide antibodies that neutralize or abrogate TAF activity." * MODULATING VACCINE AGAINST HIV-1 NEF PROTEIN INDUCED LYMPHOCYTE DEPLETION - "The invention comprises of a peptide prophylactic or therapeutic vaccine that will provide protection against Nef-mediated pathogenesis, which causes T cell depletion seen in full-blown AIDS." * NEUREGULINS AS REGULATORS OF STEM CELL MIGRATION - "This invention relates to the administration of neuregulin-1 to mobilize endogenous neuronal stem cells to the damaged areas of the brain, following stroke or other neurodegenerative disorders." * RAD ATTENUATION OF VASCULA[cell cut: 4746 characters, first 2000 kept]
workflow state: Published
service_provided_by: Office of Technology Transfer, Morehouse School of Medicine
has_url: http://www.msm.edu/files/Technology%20Licensing%20Brochure_2010.pdf
ERO_0001053: false
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2011-04-08T13:33:14.926-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-06-01T12:50:57.337-05:00
type: access service

JEOL JSM-820
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc77-5da0-ecc6-81a580000000
model_number: JSM-820
related_technique: scanning electron microscopy
located_in: Electron Microscopy Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2011-04-08T14:03:15.195-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-04-13T13:21:56.080-05:00
type: scanning electron microscope

JEOL JEM-1200EX
has add access: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
has remove access: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc77-5da0-ecc6-81a580000000
model_number: JEM-1200EX
related_technique: transmission electron microscopy
located_in: Electron Microscopy Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
created: 2011-04-08T14:32:52.350-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2013-12-04T12:31:39.810-06:00
type: transmission electron microscope

Molecular Histology Core Laboratory
resource_description: "This facility is equipped to provide basic histological services including: paraffin embedding, paraffin sections, frozen sections, immunohistochemical and H&E staining, and in situ hybridization. The facility consists of a paraffin tissue embedding center, rotary microtomes, cryostat, tissue floatation bath, microwave, tissue processor, and slide warmers."
workflow state: Published
has_contact: Pitts, Sidney
has_PI: Bond, Vincent C., Ph.D.
mailing_address: Morehouse School of Medicine Histology Core Laboratory 720 Westview Drive, SW Atlanta, GA 30310
phone_number: (770) 572-5717
has_affiliation: Cell and Tissue Imaging Core
has_url: http://www.msm.edu/research/research_centersandinstitutes/RCMI/coreFacilities/celltissueimaging/coreMolecular.aspx
has_director: Patrickson, John
contributor: http://msm.eagle-i.net/i/00000142-c445-189b-c468-451580000000
created: 2011-04-14T15:01:33.693-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2014-04-25T13:21:01.126-05:00
type: Core Laboratory

Patrickson, John
workflow state: Published
mailing_address: Morehouse School of Medicine 720 Westview Drive Atlanta, GA 30310
contact_email: jpatrickson@msm.edu
first_name: John
last_name: Patrickson
phone_number: (404) 752-5717
title: Molecular Histology Core Leader
contributor: http://msm.eagle-i.net/i/00000142-c445-189b-c468-451580000000
created: 2011-04-14T15:01:32.134-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2014-04-25T13:21:03.010-05:00
type: person

Pitts, Sidney
workflow state: Published
contact_email: spitts@msm.edu
first_name: Sidney
last_name: Pitts
phone_number: (401) 752-1146
title: Lab Technician
has_url: http://www.msm.edu/research/research_centersandinstitutes/RCMI/coreFacilities/celltissueimaging/coreMolecular.aspx
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2011-04-14T15:01:32.926-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-04-25T15:28:35.831-05:00
type: person

Flow Cytometry & Cell Sorting Laboratory
resource_description: The Cell and Tissue Imaging Facility provides a broad range of services covering many of the major structural methods used to study cells and tissues. The Core consists of four labs: histological and microscopy training for graduate students and tissue processing and collection services for the research faculty at MSM and other institutions. This facility provides a broad range of services covering many of the major structural methods used to study cells and tissues.
eagle-i_synonym: Flow Cytometry & Cell Sorting Core
workflow state: Published
has_contact: Singh, Rajesh, Ph.D.
mailing_address: Morehouse School of Medicine 720 Westview Drive, SW Atlanta, GA 30310
contact_email: jlillard@msm.edu
phone_number: (404) 752-1863
has_affiliation: Image Analysis Core Laboratory
has_affiliation: Research Centers in Minority Institutions (RCMI), Morehouse School Of Medicine
has_affiliation: Electron Microscopy Laboratory
has_affiliation: Molecular Histology Core Laboratory
has_affiliation: Cell and Tissue Imaging Core
has_url: http://www.msm.edu/research/research_centersandinstitutes/RCMI/coreFacilities/celltissueimaging/flowcytometry.aspx
has_director: Lillard, Jr., James, Ph.D.
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2011-04-14T15:25:58.235-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2014-12-11T15:10:42.763-06:00
type: Core Laboratory

Lillard, Jr., James, Ph.D.
workflow owner: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
workflow state: Published
mailing_address: Morehouse School of Medicine 720 Westview Drive Atlanta, GA 30310
contact_email: jlillard@msm.edu
first_name: James
last_name: Lillard
phone_number: (404) 752-1863
title: Flow Cytometry & Cell Sorting Core Leader
title: Professor
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-04-14T15:25:56.574-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-04-28T16:55:35.076-05:00
type: person

Singh, Rajesh, Ph.D.
workflow state: Published
mailing_address: Morehouse School of Medicine 720 Westview Drive Atlanta, GA 30310
contact_email: rsingh@msm.edu
first_name: Rajesh
last_name: Singh
phone_number: (401) 756-6661
title: Managing Director, Flow Cytometry Core
title: Research Instructor
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2011-04-14T15:25:57.336-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-04-28T16:37:59.108-05:00
type: person

Sample preparation for electron microscopy
Fee for service: true
resource_description: "Complete preparation of samples (i.e. fixation, dehydration, critical point drying, sputter coating, embedding, polymerization, knife-making, trimming, H/E slide-preparation, sectioning, formvar-coated grid preparation and subsequent grid-staining)."
Service fee URL: http://www.msm.edu/research/research_centersandinstitutes/RCMI/coreFacilities/celltissueimaging/coreElectron.aspx
workflow state: Published
service_provided_by: Electron Microscopy Laboratory
related_technique: tissue embedding
related_technique: tissue sectioning
related_technique: fixation
related_technique: polymerization
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-04-19T13:45:49.487-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-05-02T12:13:04.608-05:00
type: material processing service

Development & scanning service
Fee for service: true
resource_description: Electron microscopy negatives are developed and scanned onto CD for the investigator.
Service fee URL: http://www.msm.edu/research/research_centersandinstitutes/RCMI/coreFacilities/celltissueimaging/coreElectron.aspx
workflow state: Published
service_provided_by: Electron Microscopy Laboratory
related_technique: scanning electron microscopy
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-04-19T13:49:45.962-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-05-02T12:12:12.724-05:00
type: support service

Song, Qing, MD, Ph.D.
workflow state: Published
mailing_address: Morehouse School of Medicine 720 Westview Drive Atlanta, GA 30310
contact_email: qsong@msm.edu
first_name: Qing
last_name: Song
phone_number: (404) 752-1845
title: Assistant Professor, Cardiovascular Research Institute & Department of Medicine
has_url: http://www.msm.edu/research/research_centersandinstitutes/cvri/research_cni_cardio_facultystaff/Qing_Song.aspx
curator note: NV: Removed: Our long-term goal is to discover and understand the genetic and epigenetic variations that contribute to predisposition and progression of human diseases and to ethnic disparities. Our research team is composed of physician-scientists, molecular biologists, and software engineers, we are using molecular and cellular biology, genomics and epigenomics, epidemiology, bioinformatic and computational biology approaches. Our current goal is post-GWAS functional analysis to identify causal variants and underlying molecular mechanisms. Our current projects include work in the following main areas: Molecular biology studies of SNPs and CNVs on p47phox, Notch3, PDE4D and CRP DNA methylation in atherosclerosis and diabetes Technology development for molecular haplotyping Technology development for high-throughput identification of novel splicings, exons, and genes on GWAS-positive regions Technology development for high-throughput genome-wide identification of regulatory SNPs in cis-interactions Software development and computational biology Integration of genetic and epigenetic datasets Epigenetic inheritance
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012d-6123-ab8b-392d-ee1480000000
created: 2011-04-19T14:10:29.766-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2012-03-21T15:24:45.187-05:00
type: person

Cardiovascular Research Institute
resource_description: "The CVRI has access to facilities well-equipped for physiological, biochemical and molecular biologic studies. Investigators are supported by a full array of state-of-the-art equipment and software. The CVRI includes a faculty of 12 and an overall research team of 33 individuals. The new CVRI recruits have generated a total annual extramural grant revenue of $3.3 million. Follow the link for contact information and biographies."
eagle-i_synonym: CVRI
workflow state: Published
has_contact: http://msm.eagle-i.net/i/0000012f-6f46-4da6-38fa-ed3d80000000
mailing_address: Morehouse School of Medicine 720 Westview Drive Atlanta, GA 30310
phone_number: (404) 752-1545
has_url: http://www.msm.edu/research/research_centersandinstitutes/cvri.aspx
contributor: http://msm.eagle-i.net/i/00000142-c445-189b-c468-451580000000
created: 2011-04-19T14:32:59.578-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2014-04-25T13:30:26.774-05:00
type: Institute

Gene Variation Core Laboratory
resource_description: "The Human Genotyping Lab assists investigators to apply the genomic technologies to population-based research. The strategic plan is to create a link between basic science, clinical investigation and population-based research by integrating genomic sciences into our research program. The central hypothesis is that health disparities are related in part to ethnicity-specific DNA variants in critical genes that influence the susceptibility to common diseases. Morehouse School of Medicine has a longstanding interest on the studies of ethnic disparities and a longstanding strength on community outreach to underserved minority populations. Accordingly, the major objective of the MSM Human Genome Core Laboratory is to enhance the research capacity on these sample cohorts and upgrade our research to the molecular genetic level based on cutting-edge genomic technologies."
eagle-i_synonym: Human Genotyping Laboratory
Comments: on the web page make MSM note it's Dr. Song, not MS. Qing Song ...error on that page
workflow owner: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
workflow state: Published
has_contact: Song, Qing, MD, Ph.D.
has_PI: Bond, Vincent C., Ph.D.
mailing_address: Morehouse School of Medicine RW 216 720 Westview Drive Atlanta, GA 30310
contact_email: qsong@msm.edu
phone_number: (404) 752-1845
lab_delivery_address: Morehouse School of Medicine RW 216 720 Westview Drive Atlanta, GA 30310
has_affiliation: Research Centers in Minority Institutions (RCMI), Morehouse School Of Medicine
has_affiliation: Cardiovascular Research Institute
has_url: http://www.msm.edu/research/research_centersandinstitutes/RCMI/coreFacilities/geneprofiling/humangenotyping.aspx
has_director: Song, Qing, MD, Ph.D.
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-04-20T13:18:18.800-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-05-02T12:37:41.303-05:00
type: Core Laboratory

Bond, Vincent C., Ph.D.
resource_description: Principal investigator for all RCMI cores at MSM.
workflow state: Published
mailing_address: Morehouse School of Medicine 720 Westview Drive, SW Atlanta, GA 30310-1495
contact_email: vbond@msm.edu
first_name: Vincent
last_name: Bond
phone_number: (404) 752-1862
title: Associate Professor
contributor: http://msm.eagle-i.net/i/00000142-c445-189b-c468-451580000000
created: 2011-04-20T14:33:00.773-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2014-04-25T13:28:32.940-05:00
type: person

Gene variations analysis
Fee for service: true
resource_description: Bioinformatic and computational analysis related to SNPs and other genetic variations.
Service fee URL: http://www.msm.edu/research/research_centersandinstitutes/RCMI/coreFacilities/geneprofiling/humangenotyping.aspx
workflow state: Published
service_provided_by: Gene Variation Core Laboratory
related_technique: single-nucleotide polymorphism analysis
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2011-04-20T14:36:32.027-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-04-27T11:47:57.634-05:00
type: material analysis service

Genotyping service
Fee for service: true
Service fee URL: http://www.msm.edu/research/research_centersandinstitutes/RCMI/coreFacilities/geneprofiling/humangenotyping.aspx
workflow state: Published
service_provided_by: Gene Variation Core Laboratory
related_technique: genotyping assay
related_technique: pyrosequencing
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/00000142-c445-189b-c468-451580000000
created: 2011-04-20T14:38:13.509-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2014-01-07T13:23:05.349-06:00
type: material analysis service

Paraffin embedding
Fee for service: true
resource_description: "This facility is equipped to provide basic histological services including: paraffin embedding, paraffin sections, frozen sections, immunohistochemical and H&E staining, and in situ hybridization. The facility consists of a paraffin tissue embedding center, rotary microtomes, cryostat, tissue floatation bath, microwave, tissue processor, and slide warmers."
Service fee URL: http://www.msm.edu/research/research_centersandinstitutes/RCMI/coreFacilities/celltissueimaging/coreMolecular.aspx
workflow state: Published
has_contact: Pitts, Sidney
service_provided_by: Molecular Histology Core Laboratory
related_technique: tissue embedding
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-04-21T15:10:04.625-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2012-08-13T17:14:15.607-05:00
type: material analysis service

Paraffin sectioning
Fee for service: true
resource_description: "The investigator is responsible for the fixation and blocking of the tissue. For routine fixation it is recommended that the tissue is fixed with a fresh solution of 10% neutral buffered formalin or paraformaldehyde. For best results, it is recommended that the fixatives be purchased in small quantities. (Contact the laboratory for details) For frozen tissue preparations contact the laboratory."
Service fee URL: http://www.msm.edu/research/research_centersandinstitutes/RCMI/coreFacilities/celltissueimaging/coreMolecular.aspx
workflow state: Published
has_contact: Pitts, Sidney
service_provided_by: Molecular Histology Core Laboratory
related_technique: tissue sectioning
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2011-04-21T15:12:52.314-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-04-27T16:39:37.366-05:00
type: material analysis service

Frozen sectioning
Fee for service: true
resource_description: "The investigator is responsible for the fixation and blocking of the tissue. For routine fixation it is recommended that the tissue is fixed with a fresh solution of 10% neutral buffered formalin or paraformaldehyde. For best results, it is recommended that the fixatives be purchased in small quantities. (Contact the laboratory for details) For frozen tissue preparations contact the laboratory."
Service fee URL: http://www.msm.edu/research/research_centersandinstitutes/RCMI/coreFacilities/celltissueimaging/coreMolecular.aspx
Comments: Service fee for paraffin sections and embedding may have been put into "relevant" website when it should have gone into "service fee URL"
workflow state: Published
has_contact: Pitts, Sidney
service_provided_by: Molecular Histology Core Laboratory
related_technique: cryosectioning
contributor: http://msm.eagle-i.net/i/00000142-c445-189b-c468-451580000000
created: 2011-04-21T15:17:27.737-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2014-04-23T13:24:32.308-05:00
type: material analysis service

Immunohistochemical and H&E staining
Fee for service: true
resource_description: "The investigator is responsible for the fixation and blocking of the tissue. For routine fixation it is recommended that the tissue is fixed with a fresh solution of 10% neutral buffered formalin or paraformaldehyde. For best results, it is recommended that the fixatives be purchased in small quantities. (Contact the laboratory for details) For frozen tissue preparations contact the laboratory."
Service fee URL: http://www.msm.edu/research/research_centersandinstitutes/RCMI/coreFacilities/celltissueimaging/coreMolecular.aspx
workflow state: Published
service_provided_by: Molecular Histology Core Laboratory
related_technique: immunohistochemistry assay
related_technique: hematoxylin and eosin stain
related_technique: frozen block embedding
curator note: NV: Updated technique.
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-04-21T15:25:44.828-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2012-08-13T17:13:32.811-05:00
type: material analysis service

In situ hybridization
resource_description: "The investigator is responsible for the fixation and blocking of the tissue. For routine fixation it is recommended that the tissue is fixed with a fresh solution of 10% neutral buffered formalin or paraformaldehyde. For best results, it is recommended that the fixatives be purchased in small quantities. (Contact the laboratory for details) For frozen tissue preparations contact the laboratory."
Service fee URL: http://www.msm.edu/research/research_centersandinstitutes/RCMI/coreFacilities/celltissueimaging/coreMolecular.aspx
workflow state: Published
service_provided_by: Molecular Histology Core Laboratory
related_technique: in situ hybridization
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2011-04-21T15:27:48.717-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-04-27T16:39:29.545-05:00
type: material analysis service

Functional Genomics Core Laboratory
resource_description: The Morehouse School of Medicine Functional Genomics Core is an RCMI funded core that provides fee-based microarray ‘-OMICS’ services for research investigators using glass slide technology platforms. We are an Agilent Certified Core facility and a member of the Association of Biomolecular Research Core Facilities (ABRF) worldwide. Specifically we provide assistance, or full services, from RNA isolation to scanning hybridized microarrays and raw data extraction. In conjunction with the RCMI Bioinformatics Core, we provide full services in the analyses of ‘-omics’ datasets. We support all microarray products from Agilent as well as any other array company that utilizes uncoated glass slide technologies. We also provide consultative services for custom microarray design.
Lab concerns: Using LIMS webbased system
ETL data source file name: FunctionalGenomicCorePRP_MSM_v4(1).xlsx
Documentation (temp): Laboratory Notebook, CDs and hard drive for long term storage
Comments: LAB INVENTORY SYSTEM is for the user only. Data Investigator driven, would require investigator permission for use
has add access: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
has remove access: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
workflow state: Published
has_contact: Leander-Griffith, Michelle V.
mailing_address: 720 Westview Dr. Atlanta, GA 30310
contact_email: mleander@msm.edu
phone_number: 404-752-8940
lab_data_format: MAG-ML files
lab_data_format: Written and image files
lab_delivery_address: MEB 241 720 Westview Dr. Atlanta, GA 30310
has_affiliation: Gene Profiling Core
has_url: http://www.msm.edu/research/research_centersandinstitutes/RCMI/coreFacilities/geneprofiling/functionalGenomics.aspx
has_director: Emmett, Neremiah
contributor: http://msm.eagle-i.net/i/00000142-c445-189b-c468-451580000000
created: 2011-04-25T18:12:07.775-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2014-04-25T13:24:20.625-05:00
type: Core Laboratory

Human Exon G3 microarrays, 2x400K
resource_description: The Agilent SurePrint G3 Exon Microarrays make it easy to transition from standard expression analysis to exon analysis. Probes are designed to target all exons within genes based on well-annotated and up-to-date databases, ensuring both comprehensive and relevant coverage across the genome. Our high-quality 60-mer probes ensure high sensitivity and accuracy for all Agilent gene expression microarrays, including the new exon arrays. The Low Input Quick Amp WT Labeling Kit (LIQAWT) makes amplification and labeling from a low amount of RNA quick and easy. Having been co-developed with these arrays, LIQA WT is optimized to maintain an accurate representation of RNA species, now across whole transcripts. In addition, GeneSpring 11.5 provides new features for the analysis of splicing events along with gene-level expression, lending confidence in the detection of subtle changes now possible with the exon microarrays system.
eagle-i_synonym: Human Exon G3 Microarray, 2x400K
workflow state: Published
has_contact: Leander-Griffith, Michelle V.
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc67-5972-ecc6-81a580000000
related_technique: bioinformatics analysis
related_technique: Nucleic acid microarray assay
curator note: MH curated with Paula- need term request for microarray type.
located_in: Functional Genomics Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-04-25T18:13:06.403-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-09-14T18:26:46.797-05:00
type: microarray

Mouse Exon G3 microarrays, 2x400k
resource_description: "The Agilent SurePrint G3 Mouse Exon Microarrays come in two options, offering a choice in coverage and throughput. Offering probes targeting individual exons, these arrays make it possible to look beyond the gene to more subtle but relevant expression changes. Agilent Gene Expression Microarrays remain the fast, simple, and affordable choice in gene expression analysis, with new capabilities to drill down into important RNA changes including those at the exon level. Importantly, the gold standard sensitivity provided by Agilent Gene Expression Microarrays has been retained in these new Exon versions, so that even the smallest fold changes are detected."
Comments: yep! Reagent type microarray, right!
workflow state: Published
has_contact: Leander-Griffith, Michelle V.
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc67-5972-ecc6-81a580000000
has_url: http://www.genomics.agilent.com/CollectionSubpage.aspx?PageType=Product&SubPageType=ProductDetail&PageID=2436
related_technique: Nucleic acid microarray assay
curator note: Paula- can you add a description, a URL, and a manufacturer? I changed the type.
located_in: Functional Genomics Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-04-25T18:14:19.608-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-09-01T13:58:04.541-05:00
type: microarray

Agilent DNA Microarray Scanner with SureScan High Resolution Technology
resource_description: "Agilent’s high-resolution microarray scanner is part of an improved microarray platform that provides greater transcript definition and chromosomal definition, as well as expression measurements that more accurately reflect the range of gene activity in biological systems. Agilent’s system produces accurate relative quantitation of signal levels over a range of more than six orders of magnitude, far exceeding the capabilities of other systems. This enhances data quality across a broad range of applications such as gene expression, miRNA profiling, array CGH, ChIP, and methylation assays."
workflow state: Published
has_contact: Leander-Griffith, Michelle V.
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc67-5972-ecc6-81a580000000
has_url: http://www.chem.agilent.com/Library/brochures/5989-8555en_lo.pdf
related_technique: Nucleic acid microarray assay
located_in: Functional Genomics Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d106-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-04-26T06:06:40.365-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-09-14T18:25:54.264-05:00
type: array scanner

ChIP chromatin labeling
Fee for service: true
Service fee URL: http://www.msm.edu/research/research_centersandinstitutes/RCMI/coreFacilities/geneprofiling/functionalGenomics.aspx
Comments: make this website the same for all of this cores services may have omitted on a couple :-( Chromatin immunoprecipitation (ChIP) is a method used to determine the location of DNA binding sites on the genome for a particular protein of interest. This technique gives a picture of the protein–DNA interactions that occur inside the nucleus of living cells or tissues. The in vivo nature of this method is in contrast to other approaches traditionally employed to answer the same questions.
workflow state: Published
has_contact: Leander-Griffith, Michelle V.
service_provided_by: Functional Genomics Core Laboratory
related_technique: chromatin immunoprecipitation
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-04-26T15:21:22.949-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-09-14T18:36:29.847-05:00
type: material analysis service

Genomic DNA library labeling
Fee for service: true
Service fee URL: http://www.msm.edu/research/research_centersandinstitutes/RCMI/coreFacilities/geneprofiling/functionalGenomics.aspx
Comments: not sure this technique is valid The genomic library is a collection of clones containing the genomic DNA sequences of an organism. Typically, these molecules are propagated in bacteria or phage. The library is an important tool used in the process of isolating genes.
workflow state: Published
has_contact: Emmett, Neremiah
service_provided_by: Functional Genomics Core Laboratory
related_technique: nucleic acid labeling
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-04-26T15:21:34.673-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-09-14T18:35:57.311-05:00
type: material analysis service

Applied Biosystems 3130xl Gene Analyzer
resource_description: "Applied Biosystems 3130xl Genetic Analyzer is the latest generation of 16-capillary electrophoresis instruments for the medium throughput laboratories. The system offers industry-leading performance, plus sophisticated automation capabilities allowing researchers to save time, reduce costs and increase productivity."
eagle-i_synonym: Genetic Analyzer
workflow state: Published
has_contact: Yang, Qi
model_number: 3130xl
has_url: https://products.appliedbiosystems.com/ab/en/US/adirect/ab?cmd=catNavigate2&catID=601645
related_technique: DNA sequencing
located_in: DNA Sequencing Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2011-04-27T10:48:19.159-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-09-23T15:38:17.672-05:00
type: DNA sequencer

DNA sequencing
Fee for service: true
resource_description: Includes reaction and capillary electrophoresis.
Service fee URL: http://www.msm.edu/research/research_centersandinstitutes/RCMI/coreFacilities/geneprofiling/dnasequencing.aspx
Comments: Capillary electrophoresis (CE), also known as capillary zone electrophoresis (CZE), can be used to separate ionic species by their charge and frictional forces and hydrodynamic radius. In traditional electrophoresis, electrically charged analytes move in a conductive liquid medium under the influence of an electric field. Introduced in the 1960s, the technique of capillary electrophoresis (CE) was designed to separate species based on their size to charge ratio in the interior of a small capillary filled with an electrolyte.
workflow state: Published
has_contact: Yang, Qi
service_provided_by: DNA Sequencing Laboratory
related_technique: DNA sequencing
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2011-04-27T10:57:09.178-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-05-02T10:34:11.484-05:00
type: material analysis service

LTQ ion trap mass spectrometer
resource_description: "Thermo Scientific LTQ XL high performance linear ion trap delivers more structural information than any other ion trap mass spectrometer. LTQ XL is the only mass spectrometer that offers multiple dissociation techniques, PQD, ETD and CID. Pulsed Q Collision Induced Dissociation (PQD) is a proprietary technique that eliminates the low mass cut-off concern inherent with all ion traps. This results in extensive coverage for predicted and unpredicted metabolites, and the ability to perform peptide quantification using iTRAQ* labels. In addition, fast polarity switching for high-sensitivity analysis of unknowns, high resolution isolation (HRI), intelligent Data Dependent* acquisition, and optional high resolution accurate mass functionality are all tools to help the researcher gain confident structural identification routinely."
workflow state: Published
has_contact: Powell, Michael D., Ph.D.
has_contact: Chu, Jane
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc86-3932-ecc6-81a580000000
model_number: LTQ XL
has_url: http://www.thermoscientific.com/ecomm/servlet/productsdetail?productId=11960637&groupType=PRODUCT&searchType=0&storeId=11152
has_url: http://www.thermoscientific.com/ecomm/servlet/techresource?resourceId=92114&storeId=11152#
located_in: Proteomics Laboratory
contributor: http://msm.eagle-i.net/i/00000142-c445-189b-c468-451580000000
created: 2011-04-27T13:42:55.701-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2014-04-23T13:45:50.294-05:00
type: ion trap mass spectrometer

Chu, Jane
workflow state: Published
contact_email: jchu@msm.edu
first_name: Jane
last_name: Chu
phone_number: (404) 752-8469
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2011-04-27T13:42:54.095-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-06-15T13:30:02.836-05:00
type: person

EXQuest automatted spot cutter
resource_description: "Gel excision instrument, includes enclosure, imaging system, fluidics system, robotics, sensors, cutting head, gel tray, microplate track, wash station."
workflow state: Published
has_contact: Chu, Jane
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc6a-a024-ecc6-81a580000000
model_number: 165-7200
has_url: http://www.bio-rad.com/prd/en/US/adirect/biorad?cmd=BRCatgProductDetail&isFromSearch=true&entryPoint=adirect&catID=d3f27dd1-a47f-4fb7-9ffd-a3bdf436ea02&vertical=LSR&messageType=BRCatgProductDetail&par[cell cut: 252 characters, first 200 kept]
related_technique: protein expression profiling
located_in: Proteomics Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2011-04-27T13:59:55.638-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-09-13T10:19:00.325-05:00
type: spot cutter

Bio-Plex 200 system
resource_description: "The Bio-Plex® 200 system is a suspension array system which offers protein and nucleic acid researchers a reliable multiplex assay solution that permits analysis of up to 100 biomolecules in a single sample."
workflow owner: http://msm.eagle-i.net/i/00000142-c445-189b-c468-451580000000
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc6a-a024-ecc6-81a580000000
model_number: Bio-PLX 200
has_url: http://www.bio-rad.com/prd/en/US/adirect/biorad?cmd=BRCatgProductDetail&productID=205701&WT.mc_id=aw-pfd-na-systems&WT.srch=1&gclid=CKSY0c-3vagCFUxo5QodMipJDQ
located_in: Proteomics Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2011-04-27T14:33:03.803-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-09-13T11:15:05.358-05:00
type: bead array reader

Anopheles Quadrimaculatus microarray
resource_description: Available as mRNA expression microarrarys.
eagle-i_synonym: Mosquito microarray
workflow state: Published
has_contact: Leander-Griffith, Michelle V.
related_technique: bioinformatics analysis
related_technique: Nucleic acid microarray assay
located_in: Functional Genomics Core Laboratory
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-04-28T14:23:53.798-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-09-14T18:28:22.624-05:00
type: microarray

Arabidopsis microarray
resource_description: Available are mRNA expression microarrarys
eagle-i_synonym: Water Cress microarray
workflow state: Published
has_contact: Leander-Griffith, Michelle V.
related_technique: bioinformatics analysis
related_technique: Nucleic acid microarray assay
located_in: Functional Genomics Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-04-28T14:26:08.964-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-09-01T13:38:15.595-05:00
type: microarray

Homo Sapiens microarray
resource_description: Available are mRNA expression, Exon, miRNA, Encode chip-on-chip, promotor, CpG Island, DNA Methylation, CNV, CGH, and CGH+SNP microarrarys.
eagle-i_synonym: Human microarray
workflow state: Published
has_contact: Emmett, Neremiah
related_technique: bioinformatics analysis
related_technique: Nucleic acid microarray assay
located_in: Functional Genomics Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-04-28T14:31:19.055-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-09-01T13:57:03.413-05:00
type: microarray

Mus Musculus microarray
resource_description: Available are mRNA expression, Exon, miRNA, promotor, CpG Island, DNA Methylation, CNV, CGH, and CGH microarrarys.
eagle-i_synonym: Mouse microarray
workflow state: Published
has_contact: Leander-Griffith, Michelle V.
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc67-5972-ecc6-81a580000000
has_url: http://www.genomics.agilent.com/GenericB.aspx?PageType=Search&SubPageType=Search&PageID=34&q=mouse+microarray
related_technique: bioinformatics analysis
related_technique: Nucleic acid microarray assay
located_in: Functional Genomics Core Laboratory
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-04-28T14:31:50.364-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-09-14T18:29:10.789-05:00
type: microarray

Oncorhynchus tshawytscha microarray
resource_description: Available are mRNA expression microarrarys.
eagle-i_synonym: Salmon microarray
workflow state: Published
has_contact: Leander-Griffith, Michelle V.
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc67-2045-ecc6-81a580000000
has_url: http://seqwright.com/researchservices/microarray.html?gclid=CLShm8OEzKgCFUiK4AodFjJipA
related_technique: bioinformatics analysis
related_technique: Nucleic acid microarray assay
curator note: NV: Filled term request
located_in: Functional Genomics Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-04-28T14:32:26.060-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-09-14T18:29:36.325-05:00
type: microarray

Ovis aries microarray
resource_description: GenUs BioSystems standard gene expression service includes all materials, processing, quality control, and reporting - including follow-up analysis for a single price. Specialists in small, difficult sample handling we regularly handle sample sizes down to 10 cells (Total RNA yield ~ 100 picograms) utilizing state of the art single and double amplification protocols.
eagle-i_synonym: Sheep microarray
workflow state: Published
has_contact: Leander-Griffith, Michelle V.
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc73-c2cd-ecc6-81a580000000
has_url: http://www.genusbiosystems.com/species-sheep-gene-expression-service.shtml
related_technique: bioinformatics analysis
related_technique: Nucleic acid microarray assay
located_in: Functional Genomics Core Laboratory
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-04-28T14:32:58.942-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-09-14T18:29:57.618-05:00
type: microarray

Porcine microarray
resource_description: Available are mRNA expression microarrarys.
eagle-i_synonym: Pig microarray
workflow state: Published
has_contact: Leander-Griffith, Michelle V.
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc73-c2cd-ecc6-81a580000000
has_url: http://genusbiosystems.com/species-porcine-gene-expression-service.shtml?gclid=CJrKmu2KzKgCFQl_5Qodcibkpw
related_technique: bioinformatics analysis
related_technique: Nucleic acid microarray assay
located_in: Functional Genomics Core Laboratory
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-04-28T14:33:32.013-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-09-14T18:30:24.249-05:00
type: microarray

Rattus norvegicus microarray
resource_description: Available are mRNA expression, Exon, miRNA, promotor, and CGH microarrarys.
eagle-i_synonym: Rat microarray
Comments: I spelled seqwright wrong on the previous, this is correct
workflow state: Published
has_contact: Leander-Griffith, Michelle V.
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc67-2045-ecc6-81a580000000
related_technique: bioinformatics analysis
related_technique: Nucleic acid microarray assay
located_in: Functional Genomics Core Laboratory
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-04-28T14:34:12.067-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-09-14T18:33:21.757-05:00
type: microarray

Rhesus Macaque microarray
resource_description: Available are mRNA expression microarrarys.
eagle-i_synonym: Rhesus monkey microarray
workflow state: Published
has_contact: Leander-Griffith, Michelle V.
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc73-c2cd-ecc6-81a580000000
has_url: http://genusbiosystems.com/species-rhesus-macaque-gene-expression-service.shtml?gclid=CIDHlpOOzKgCFQNx5QodQxSLoA
related_technique: bioinformatics analysis
related_technique: Nucleic acid microarray assay
located_in: Functional Genomics Core Laboratory
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-04-28T14:35:34.052-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-09-14T18:33:41.267-05:00
type: microarray

Xenopus microarray
resource_description: "The Xenopus Microarray project is supported by the Rockefeller University; it is part of the Laboratory of Molecular Vertebrate Embryology headed by Professor Ali Brivanlou. Software tools and database development are provided by the Laboratory of Computational Genomics headed by Assistant Professor Terry Gaasterland."
eagle-i_synonym: Frog microarray
Comments: Please test if you are able to go to the xenopus website..
workflow state: Published
has_contact: Leander-Griffith, Michelle V.
has_manufacturer: http://msm.eagle-i.net/i/00000130-2cfc-2219-92f1-503b80000000
has_url: http://www.biochipnet.com/node/324
has_url: http://xenopus.rockefeller.edu/xenopusresearch.html
related_technique: bioinformatics analysis
related_technique: Nucleic acid microarray assay
curator note: NV: Website is not working, so I removed it: http://arrays.rockefeller.edu/xenopus/
located_in: Functional Genomics Core Laboratory
located_in: http://msm.eagle-i.net/i/00000130-2cfc-2219-92f1-503b80000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-04-28T14:37:00.572-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-09-14T18:30:50.153-05:00
type: microarray

BD FACS Aria II
resource_description: "The new BD FACSAria™ II cell sorter improves ease of use, flexibility, and aseptic capability to make it the best choice for consistent results in sorting across a broad range of applications. The heart of this cell sorting revolution is the true fixed-alignment flow cell, gel-coupled to the collection optics. Fixed alignment minimizes startup time and improves reproducibility. Gel coupling to the objective lens improves collection efficiency and increases the sensitivity and resolution needed for multicolor applications. The BD FACSAria II cell sorter advances cell sorting with multiple improvements. A new fluidics design improves aseptic setup and cleaning. New nozzle sizes enable a wide range of particles to be sorted. Software improvements dramatically cut the time spent on cytometer setup, adjustment, and maintenance. The BD FACSAria II cell sorter also sets a new standard for ease of use to improve both workflow and productivity. A new nozzle design allows for reproducible insertions. A new universal sort tube collection mount makes it easier to insert and remove tube holders. Software wizards and automation simplify aseptic sort setup, drop-delay determination, and clog detection. Compatibility with BD digital analyzers makes it easier to move from analysis to cell sorting."
workflow state: Published
has_contact: Singh, Rajesh, Ph.D.
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc6a-1489-ecc6-81a580000000
model_number: Aria II
has_url: http://www.bdbiosciences.com/instruments/facsaria/index.jsp
located_in: Flow Cytometry & Cell Sorting Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2011-04-29T10:42:24.380-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-04-29T14:50:45.266-05:00
type: flow cytometer sorter

Human CGH microarray, 1x1M
resource_description: The Agilent Human Genome CGH Microarray is a high-resolution tool for genome-wide DNA copy number variation profiling without amplification or complexity reduction. Comprehensive probe coverage is enhanced with emphasis on known genes, promoters, miRNAs, pseudoautosomal, and telomeric regions.
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc67-5972-ecc6-81a580000000
has_url: http://www.genomics.agilent.com/CollectionSubpage.aspx?PageType=Product&SubPageType=ProductDetail&PageID=1463
related_technique: Nucleic acid microarray assay
located_in: Functional Genomics Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-05-01T04:02:38.533-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-09-14T18:31:05.977-05:00
type: microarray

Human High Resolution CNV microarray, 1x1M
resource_description: Agilent SurePrint G3 and High-definition CNV microarrays enable multiple loci to be assessed simultaneously, allowing for their identification and characterization. The microarrays provide high-resolution and optimized probe design for maximal sensitivity and specificity as required by the researcher.
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc67-5972-ecc6-81a580000000
has_url: http://www.genomics.agilent.com/CollectionSubpage.aspx?PageType=Product&SubPageType=ProductDetail&PageID=1495
related_technique: Nucleic acid microarray assay
located_in: Functional Genomics Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d106-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-05-01T04:05:55.045-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-09-14T18:31:20.969-05:00
type: microarray

Human Genome CGH+SNP microarray
resource_description: The Agilent SurePrint G3 Human Comparative Genomic Hybridization (CGH) platform has been extended to include a set of Single Nucleotide Polymorphism (SNP) probes on the same microarray. This allows for the simultaneous, high-resolution detection of copy number and copy-neutral variations, without running two separate microarray experiments. The same straight-forward Agilent CGH workflow is used to prepare the samples for hybridization to the SurePrint G3 Human CGH+SNP microarrays. Restriction digestion of genomic DNA allows genotyping of SNPs located in the enzymes’ recognition sites. After labeling and hybridization, CGH+SNP microarray data are analyzed using novel algorithms contained within Agilent’s Genomic Workbench software.
Comments: Please put correct technique for these. Not sure what that should be.
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc67-5972-ecc6-81a580000000
has_url: http://www.genomics.agilent.com/CollectionOverview.aspx?PageType=Application&SubPageType=ApplicationOverview&PageID=2394
related_technique: Nucleic acid microarray assay
related_technique: copy number variation profiling
located_in: Functional Genomics Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-05-01T04:11:29.285-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-09-14T18:31:37.281-05:00
type: microarray

Human DNA Methylation microarray, 1x244k
resource_description: The Agilent Human CpG Island Microarray provides researchers with comprehensive, genome-wide insight into how DNA methylation changes may be correlated to critical biological development processes including cancer, genomic imprinting, gene silencing and chromatin stability. Probes optimized for maximum sensitivity and specificity.
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc67-5972-ecc6-81a580000000
has_url: http://www.genomics.agilent.com/CollectionSubpage.aspx?PageType=Product&SubPageType=ProductDetail&PageID=1499
related_technique: Nucleic acid microarray assay
located_in: Functional Genomics Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-05-01T04:14:28.676-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-09-14T18:31:51.980-05:00
type: microarray

Human CpG Island microarray, 1x244K
resource_description: The Agilent Human DNA Methylation Microarray is designed to interrogate known CpG islands and two additional groups of methylated DNA. The array is specifically designed for analysis of methylated DNA derived from affinity-based isolation methods such as methylated DNA immunoprecipitation (MDIP).
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc67-5972-ecc6-81a580000000
has_url: http://www.genomics.agilent.com/CollectionSubpage.aspx?PageType=Product&SubPageType=ProductDetail&PageID=2157
related_technique: Nucleic acid microarray assay
located_in: Functional Genomics Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d106-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-05-01T04:28:11.155-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-09-14T18:32:06.875-05:00
type: microarray

Human miRNA microarray Release 16.0, 8x60K
resource_description: Agilent Human microRNA Microarrays generate complete microRNA profiles in order to provide broad insight into human expression and regulation. Probe design, coupled with a unique labeling method, works in concert to provide the optimal sensitivity and specificity that your work demands.
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc67-5972-ecc6-81a580000000
has_url: http://www.genomics.agilent.com/CollectionSubpage.aspx?PageType=Product&SubPageType=ProductDetail&PageID=1531
related_technique: Nucleic acid microarray assay
located_in: Functional Genomics Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d106-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-05-01T04:31:30.849-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-09-14T18:32:24.225-05:00
type: microarray

Human ENCODE ChIP-on-chip microarray
resource_description: The Human ENCODE ChIP-on-chip Microarray is optimized using probes specifically validated for ChIP-on-chip technology. It is designed to specifically identify human DNA binding proteins within the ENCODE regions through traditional chromatin immunoprecipitation (ChIP) pull-down coupled with powerful DNA microarray location analysis.
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc67-5972-ecc6-81a580000000
has_url: http://www.genomics.agilent.com/CollectionSubpage.aspx?PageType=Product&SubPageType=ProductDetail&PageID=1483
related_technique: Nucleic acid microarray assay
curator note: changed name from unreadable URL. MH. Paula- is there a manufacturer for this item?
located_in: Functional Genomics Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d106-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-05-01T04:35:34.638-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-09-14T18:32:47.919-05:00
type: microarray

RNA analysis
Fee for service: true
resource_description: RNA services offered by the Functional Genomics Core include: * RNA amplification * RNA isolation * RNA labeling –Cyanine dye * RNA purification * RNA quality control assessment * RNA quantitation
Service fee URL: http://www.msm.edu/research/research_centersandinstitutes/RCMI/coreFacilities/geneprofiling/functionalGenomics.aspx
workflow state: Published
service_provided_by: Functional Genomics Core Laboratory
related_technique: purification
related_technique: RNA quantitation assay
related_technique: RNA quality analysis
curator note: TJ: removed * RNA QC service because looks like a duplicate of quality control assessment
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2011-05-01T15:04:09.732-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-05-01T18:03:22.992-05:00
type: material analysis service

miRNA analysis
Fee for service: true
resource_description: Service includes: * miRNA amplification * miRNA isolation * miRNA labeling-cyanine dye * miRNA purification * miRNA quality assessment * miRNA quantitation
Service fee URL: http://www.msm.edu/research/research_centersandinstitutes/RCMI/coreFacilities/geneprofiling/functionalGenomics.aspx
Comments: Please make Michelle the contact for all of this cores services
workflow state: Published
has_contact: Leander-Griffith, Michelle V.
service_provided_by: Functional Genomics Core Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2011-05-01T15:51:50.220-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-05-01T18:07:11.281-05:00
type: material analysis service

Microarray services
Fee for service: true
resource_description: Includes mouse whole genome microarrays, human whole genome microarrays, and rat whole genome microarrays. Available microarray services: * Hybridization * Image Quality Control * Scanning
Service fee URL: http://www.msm.edu/research/research_centersandinstitutes/RCMI/coreFacilities/geneprofiling/functionalGenomics.aspx
Comments: not sure about techniques on these
workflow state: Published
has_contact: Leander-Griffith, Michelle V.
provides_access_to: Agilent scanner
has_restriction: RNA must be already extracted from human tissue or blood.
service_provided_by: Functional Genomics Core Laboratory
related_technique: array scanning
related_technique: Nucleic acid microarray assay
related_technique: quality control
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-05-01T16:08:25.929-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-09-14T18:35:11.617-05:00
type: material analysis service

In-gel digestion protocol
resource_description: In-gel digestion protocol for protein gels for mass spectrometry.
Comments: In Gel Digestion Procedure (3-20-2011 by Powell) 1. Excise the band as closely as possible with a clean scalpel blade. Be sure to use gloves and a clean surface for excision. 2. Place the gel piece into a clean eppendorf tube and immerse it in 25mM AmBic in 50% acetonitrile. 3. Repeat step 2 until the gel piece is destained (typically twice). 4. After removing the destain buffer place the tube in the speedvac to dry. 5. Add 100µl 50 mM AmBic and ensure that the pieces are completely covered 6. Remove a DTT one shot from the freezer and add 90µl of mass spec water (500mM stock) 7. Add 2ul of the DTT stock to the re-hydrated gel piece arid incubate at 56°C for at least 30 min. 8. Reconstitute a one shot IAA tube from the freezer and add 150µl of mass spec water (1M stock, protect from light exposure). 9. Add 2µl of the stock to the gel piece and incubate at room temp for at least 30 min. 10. Dilute a fresh vial of trypsin (vials should be removed from -80°C and any unused portion can be re-used within a week at -20°C) 8µl to 312µl 50 mM AmBic kept on ice. 11. Add 10µl diluted trypsin for visible Coomasie bands or 5µl for clearer areas. 12. Incubate at 37°C with shaking for 4 hours. 13. Add 50µl of 0.5% formic acid and incubate 10 min 14. Remove the fluid and store at 4°C 15. Add 100µl of 100% Acetonitrile to gel slice and incubate 10 min with shaking, remove fluid to new tube 16. Add 100µl of 100% Acetonitrile to gel slice and incubate 10 min with shaking, combine with previous extraction 17. Dry down the extractions then add the fluid from step 14 to reconstitute. 18. The supernatant can be stored at -20°C or directly analyzed. =============================================================================================== Notes: AmBIC = Ammonium Bicarbonate, solvents are all mass spec grade, never go into reagent bottles with a pipette (especially acids) pour out a portion into a separate container and then pipette from the container.
workflow state: Published
has_contact: Chu, Jane
used_by: Proteomics Laboratory
has_author: Powell, Michael D., Ph.D.
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-05-10T14:37:47.700-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-05-16T11:18:05.531-05:00
type: protocol

Alpha globin knockout
workflow state: Published
has_entrez_gene_id: 15122
has_gene_symbol: Hba-a1
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-05-16T11:53:52.334-05:00
creator: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
modified: 2011-05-16T11:55:36.416-05:00
type: deletion

Beta globin knockout
workflow state: Published
has_entrez_gene_id: 15129
has_gene_symbol: Hbb-b1
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-05-16T11:53:53.128-05:00
creator: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
modified: 2011-05-16T11:54:48.179-05:00
type: deletion

Department of Pharmacology & Toxicology, Morehouse School of Medicine
resource_description: "The Department of Pharmacology and Toxicology provides educational programs for medical students and graduate students in the biomedical sciences. Our department offers study and research in a variety of pharmacology and toxicology sub-discipline areas, including: cardiovascular, ocular, biochemical, neural, molecular, immunological and environmental."
workflow owner: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
workflow state: Published
has_contact: Tosini, Gianluca, Ph.D.
mailing_address: Morehouse School of Medicine Department of Pharmacology and Toxicology 720 Westview Drive Atlanta, GA 30310
contact_email: gtosini@msm.edu
phone_number: (404) 756-5214
has_url: http://www.msm.edu/academic/pharmacology.aspx
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2011-05-17T08:52:54.984-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-09-07T10:35:15.195-05:00
type: Academic Department

Gianluca Tosini Laboratory
resource_description: Research in Dr Tosini’s laboratory focuses on the roles that melatonin and the circadian clock play in the regulation of retinal physiology and pathophysiology. We have a series of Transgenic mice in which the melatonin receptors have been removed (melatonin receptors KO).
workflow state: Published
has_contact: Tosini, Gianluca, Ph.D.
mailing_address: Morehouse School of Medicine Department of Pharmacology and Toxicology 720 Westview Drive Atlanta, GA 30310
contact_email: gtosini@msm.edu
phone_number: (404) 756-5214
has_affiliation: Department of Pharmacology & Toxicology, Morehouse School of Medicine
has_url: http://www.msm.edu/academic/pharmacology/faculty/Gianluca_Tosini.aspx
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-05-17T14:48:11.019-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-05-20T14:42:04.112-05:00
type: Laboratory

Tosini, Gianluca, Ph.D.
profiles_url: http://www.msm.edu/academic/pharmacology/faculty/Gianluca_Tosini.aspx
resource_description: "One key issue in understanding the function of the retinal clock is to localize which cells types are capable of circadian oscillation. Until very recently the vast majority of the experimental evidence suggested that, as observed in non-mammalian vertebrates, circadian clock functions in the retina were localized to the classical photoreceptors cells, rods ands cones). Such a view has been recently challenged by a series of studies suggesting that the inner layer neurons may also contain circadian clocks and by the demonstration that retina lacking photoreceptors still expresses circadian rhythms in several retinal function. Studies in my laboratory are now underway to develop new culture methods to isolate and culture different type of retinal neurons (photoreceptor, amacrine and ganglion cells) to address this important question, and to identify the mechanisms (neural and humoral) that are responsible for the communication of the information among the different cells. In contrast to the SCN (the master circadian pacemaker in the brain) the retina is a complete circadian system where photoreception and pacemaker functions and physiological output are present in the same tissue and most likely in the same cells (photoreceptors), and therefore such an organ represents an ideal experimental model to understand the mechanisms of circadian rhythms generation, entrainment outputs control and biological significance."
workflow state: Published
mailing_address: Morehouse School of Medicine Department of Pharmacology & Toxicology 720 Westview Drive Atlanta, GA 30310
contact_email: gtosini@msm.edu
first_name: Gianluca
last_name: Tosini
phone_number: (404) 756-5214
title: Chairman, Department of Pharmacology & Toxicology
title: Director, Circadian Rhythms and Sleep Disorders Program
title: Professor
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-05-18T10:21:45.522-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-09-07T10:38:24.054-05:00
type: person

Bio-Plex Manager
resource_description: "Bio-Plex Manager software empowers even the most inexperienced user to simply and quickly achieve proficiency and deliver results."
Comments: http://www.bio-rad.com/webroot/web/pdf/lsr/literature/Bulletin_3076.pdf
workflow state: Published
has_contact: Chu, Jane
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc6a-a024-ecc6-81a580000000
used_by: Proteomics Laboratory
has_url: http://www.bio-rad.com/prd/en/US/adirect/biorad?ts=1&cmd=BRCatgProductDetail&vertical=LSR&catID=5846e84e-03a7-4599-a8ae-7ba5dd2c7684&country=US&lang=en&javascriptDisabled=true
related_technique: multiplexed cytokine assay
related_technique: data analysis
has_software_license: Proprietary commercial software license
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
created: 2011-05-18T16:05:15.408-05:00
creator: http://msm.eagle-i.net/i/00000129-f7a5-d0ff-12d7-b32980000000
modified: 2011-05-20T14:43:36.719-05:00
type: software

Melatonin receptor KO mouse
resource_description: C3H MT1−/− knock-out mice homozygous for the rd1 mutation, generously donated by Drs. Reppert and Weaver (University of Massachusetts Medical School), were back-crossed with C3H/f+/+ mice in which the rd1 mutation has been removed to produce C3H/f+/+MT1−/−.
eagle-i_synonym: Melatonin receptor knockout mouse
Comments: OTTO KURATOR: converted value of property: http://purl.obolibrary.org/obo/ERO_0000578 to embedded instance. The literal value was: 25-30% ganglion cells die out by 18months of age
workflow state: Published
has_documentation: Removal of melatonin receptor type 1 increases intraocular pressure and retinal ganglion cells death in the mouse.
has_documentation: Melatonin modulates visual function and cell viability in the mouse retina via the MT1 melatonin receptor.
has_parental_strain_name: C3H
has_sequence_alteration: Melatonin receptor knockout
has_phenotype_annotation: 25-30% ganglion cells die out by 18months of age
located_in: Gianluca Tosini Laboratory
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-05-20T14:39:20.816-05:00
creator: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
modified: 2011-05-20T15:22:04.886-05:00
type: Mus musculus

Melatonin receptor knockout
workflow state: Published
has_entrez_gene_id: 17773
has_entrez_gene_id: 244701
has_gene_symbol: Mtnr1a
has_gene_symbol: Mtnr1b
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-05-20T14:39:19.743-05:00
creator: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
modified: 2011-05-20T15:21:41.081-05:00
type: deletion

Removal of melatonin receptor type 1 increases intraocular pressure and retinal ganglion cells death in the mouse.
workflow state: Published
has_PubMed_ID: 21362461
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-05-20T15:15:45.861-05:00
creator: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
modified: 2011-05-20T15:16:12.047-05:00
type: journal article

Melatonin modulates visual function and cell viability in the mouse retina via the MT1 melatonin receptor.
workflow state: Published
has_PubMed_ID: 19706469
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-05-20T15:20:10.035-05:00
creator: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
modified: 2011-05-20T15:20:35.266-05:00
type: journal article

Homo sapiens G gamma globin
workflow state: Published
has_entrez_gene_id: 3048
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-05-25T19:52:06.847-05:00
creator: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
modified: 2011-05-25T19:53:28.571-05:00
type: transgenic_insertion

Homo sapiens alpha globin
workflow state: Published
has_entrez_gene_id: 3040
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-05-25T19:52:07.628-05:00
creator: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
modified: 2011-05-25T19:54:45.822-05:00
type: transgenic_insertion

Homo sapiens A gamma globin
workflow state: Published
has_entrez_gene_id: 3047
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-05-25T19:52:08.408-05:00
creator: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
modified: 2011-05-25T19:52:56.124-05:00
type: transgenic_insertion

Homo sapiens beta globin
workflow state: Published
has_entrez_gene_id: 3043
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-05-25T19:52:10.122-05:00
creator: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
modified: 2011-05-25T19:55:18.947-05:00
type: transgenic_insertion

Homo sapien beta globin
workflow state: Published
has_entrez_gene_id: 3043
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-05-25T19:56:34.163-05:00
creator: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
modified: 2011-05-25T19:58:43.056-05:00
type: transgenic_insertion

Homo sapien alpha globin
workflow state: Published
has_entrez_gene_id: 3040
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-05-25T19:56:34.851-05:00
creator: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
modified: 2011-05-25T19:58:57.562-05:00
type: transgenic_insertion

anti-cdc2
eagle-i_synonym: Rabbit anti-human cdc2
Comments: Recognizes_species Homo sapiens Mus musculus
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc6d-65d0-ecc6-81a580000000
has_url: http://www.cellsignal.com/pdf/9112.pdf
related_technique: western blot analysis
recognizes_species: http://msm.eagle-i.net/i/0000012f-2848-3c9d-38fa-ed3d80000000
recognizes_species: http://msm.eagle-i.net/i/0000012f-2849-3aec-38fa-ed3d80000000
has_immunogenic_material: Synthetic peptide (KLH-coupled) corresponding to residues surrounding Tyr15 of human cdc2
has_isotype: IgG
derives_from_organism: Oryctolagus cuniculus
has_antibody_registry_ID: AB_2074654
has_catalog_number: 9112
has_antibody_target: cdc2
related_immunotechnique: western blot analysis
located_in: Liu Laboratory
located_in: Leonard Anderson Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-06-01T21:35:29.227-05:00
creator: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
modified: 2013-07-11T16:23:01.235-05:00
type: polyclonal antibody reagent

Synthetic peptide (KLH-coupled) corresponding to residues surrounding Tyr15 of human cdc2
type: immunogenic material

anti-dimethyl-Histone H3 (Lys79)
eagle-i_synonym: Rabbit anti-human dimethyl-Histone H3 (Lys79)
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc7b-5919-ecc6-81a580000000
related_technique: western blot analysis
recognizes_species: http://msm.eagle-i.net/i/0000012f-2849-3aec-38fa-ed3d80000000
has_immunogenic_material: KLH-conjugated synthetic peptide containing the sequence (...DFme2KTD...) where me2K corresponds to dimethyl-lysine at position 79 of histone H3
has_isotype: IgG
derives_from_organism: Oryctolagus cuniculus
has_antibody_registry_ID: AB_1587126
has_clone_ID: NL59
has_catalog_number: 05-835
has_antibody_target: Histone H3
related_immunotechnique: western blot analysis
curator note: Recognizes_species Homo sapiens
located_in: Leonard Anderson Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-06-01T21:38:16.662-05:00
creator: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
modified: 2013-07-11T16:42:10.143-05:00
type: monoclonal antibody reagent

KLH-conjugated synthetic peptide containing the sequence (...DFme2KTD...) where me2K corresponds to dimethyl-lysine at position 79 of histone H3
type: immunogenic material

anti-GATA-4
eagle-i_synonym: Mouse anti-human GATA-4
Comments: Recognizes_species Homo sapiens Mus musculus
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc82-0c5e-ecc6-81a580000000
has_inventory_number: Santa Cruz Biotechnology catalog #: sc-25310
has_url: http://datasheets.scbt.com/sc-25310.pdf
related_technique: western blot analysis
recognizes_species: http://msm.eagle-i.net/i/0000012f-2848-3c9d-38fa-ed3d80000000
recognizes_species: http://msm.eagle-i.net/i/0000012f-2849-3aec-38fa-ed3d80000000
has_immunogenic_material: GATA-4 amino acids 328-429
has_isotype: IgG2a
derives_from_organism: Mus musculus
has_antibody_registry_ID: AB_627667
has_catalog_number: sc-25310
has_antibody_target: GATA-4
related_immunotechnique: western blot analysis
located_in: Leonard Anderson Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-06-01T21:47:25.526-05:00
creator: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
modified: 2013-07-11T16:43:15.765-05:00
type: monoclonal antibody reagent

GATA-4 amino acids 328-429
has_entrez_gene_id: 2626
has_gene_symbol: GATA4
type: immunogenic material

anti-Cardiac Troponin 1
eagle-i_synonym: Mouse anti-human Cardiac Troponin 1
eagle-i_synonym: Mouse anti-human cTn1
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc7b-5919-ecc6-81a580000000
has_url: http://www.millipore.com/catalogue/item/mab3150
recognizes_species: http://msm.eagle-i.net/i/0000012f-2849-3aec-38fa-ed3d80000000
has_immunogenic_material: Human native tropinin complex
has_isotype: IgG2b
derives_from_organism: Mus musculus
has_antibody_registry_ID: AB_94708
has_clone_ID: 284 (19C7)
has_catalog_number: MAB3150
has_antibody_target: Cardiac Troponin 1
curator note: Recognizes_species Homo sapiens
located_in: Leonard Anderson Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-06-01T21:49:58.519-05:00
creator: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
modified: 2013-07-11T16:27:19.734-05:00
type: monoclonal antibody reagent

Human native tropinin complex
has_entrez_gene_id: 7137
has_gene_symbol: TNNI3
type: immunogenic material

anti-PSR-45 to Phosphoserine
eagle-i_synonym: Mouse anti-PSR-45 to Phosphoserine
Comments: Recognizes_species Homo sapiens
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc66-7fce-ecc6-81a580000000
has_url: http://www.abcam.com/Phosphoserine-antibody-PSR-45-ab6639.html
recognizes_species: http://msm.eagle-i.net/i/0000012f-2849-3aec-38fa-ed3d80000000
has_immunogenic_material: Recombinant fragment: (pS) conjugated to KLH
has_isotype: IgG1
derives_from_organism: Mus musculus
has_antibody_registry_ID: AB_305611
has_clone_ID: PSR-45
has_catalog_number: ab6639
has_antibody_target: PSR-45 to Phosphoserine
located_in: Leonard Anderson Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-06-01T21:51:52.820-05:00
creator: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
modified: 2013-07-11T16:45:52.853-05:00
type: monoclonal antibody reagent

Recombinant fragment: (pS) conjugated to KLH
type: immunogenic material

anti-Smooth Muscle Myosin IgG
resource_description: No detectable cross-reactivity with skeletal or non-muscle myosin.
eagle-i_synonym: Rabbit anti-Smooth Muscle Myosin IgG
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc6b-14a0-ecc6-81a580000000
has_inventory_number: Biomedical Technologies, Inc catalog #: BT-562
has_url: http://btiinc.com/page/cata5.html#smooth-muscle
related_technique: immunohistochemistry assay
has_immunogenic_material: Bovine tracheal smooth muscle myosin
has_isotype: IgG
derives_from_organism: Oryctolagus cuniculus
has_antibody_registry_ID: AB_10013421
has_catalog_number: BT-562
has_antibody_target: Smooth Muscle Myosin IgG
related_immunotechnique: immunohistochemistry assay
located_in: Leonard Anderson Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-06-01T21:59:16.528-05:00
creator: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
modified: 2013-07-11T16:51:55.693-05:00
type: polyclonal antibody reagent

Bovine tracheal smooth muscle myosin
type: immunogenic material

anti-PPARγ (H-100)
eagle-i_synonym: Rabbit anti-human PPARγ (H-100)
Comments: Recognizes_species Homo sapiens Mus musculus
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc82-0c5e-ecc6-81a580000000
has_url: http://datasheets.scbt.com/sc-7196.pdf
related_technique: western blot analysis
recognizes_species: http://msm.eagle-i.net/i/0000012f-2848-3c9d-38fa-ed3d80000000
recognizes_species: http://msm.eagle-i.net/i/0000012f-2849-3aec-38fa-ed3d80000000
has_immunogenic_material: PPARγ amino acids 8-106
has_isotype: IgG
derives_from_organism: Oryctolagus cuniculus
has_antibody_registry_ID: AB_654710
has_catalog_number: sc-7196
has_antibody_target: PPARγ
related_immunotechnique: western blot analysis
located_in: Liu Laboratory
recognizes product of gene: 5468
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-06-03T11:18:24.546-05:00
creator: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
modified: 2013-07-11T16:44:46.325-05:00
type: polyclonal antibody reagent

PPARγ amino acids 8-106
has_entrez_gene_id: 5468
has_gene_symbol: PPARG
type: immunogenic material

anti-BAP37
Comments: Recognizes_species Homo sapiens Mus musculus
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc6a-f986-ecc6-81a580000000
has_url: http://www.biolegend.com/purified-anti-bap37-antibody-2120.html#
related_technique: western blot analysis
recognizes_species: http://msm.eagle-i.net/i/0000012f-2848-3c9d-38fa-ed3d80000000
recognizes_species: http://msm.eagle-i.net/i/0000012f-2849-3aec-38fa-ed3d80000000
has_immunogenic_material: Recombinant (partial) BAP37, C-terminal
has_isotype: IgG
derives_from_organism: Oryctolagus cuniculus
has_antibody_registry_ID: AB_315766
has_catalog_number: 611801
has_antibody_target: BAP37
related_immunotechnique: western blot analysis
curator note: NV: There is an issue with the display for immunogenic material: http://jira.eagle-i.net:8080/browse/ONT-1653.
located_in: Liu Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
contributor: http://msm.eagle-i.net/i/0000012d-6123-ab8b-392d-ee1480000000
created: 2011-06-03T11:22:39.913-05:00
creator: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
modified: 2013-07-11T16:28:39.259-05:00
type: polyclonal antibody reagent

anti-REA
eagle-i_synonym: Rabbit anti-human B-Cell Associated Protein 37 kDa
eagle-i_synonym: Rabbit anti-human BAP
eagle-i_synonym: Rabbit anti-human BAP37
eagle-i_synonym: Rabbit anti-human PHB-2
eagle-i_synonym: Rabbit anti-human PHB2
eagle-i_synonym: Rabbit anti-human PNAS-141
eagle-i_synonym: Rabbit anti-human PNAS141
eagle-i_synonym: Rabbit anti-human Prohibitin 2
eagle-i_synonym: Rabbit anti-human REA
eagle-i_synonym: Rabbit anti-human Repressor of Estrogen Activity
eagle-i_synonym: Rabbit anti-human p22
Comments: Recognizes_species Homo sapiens
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc6a-6776-ecc6-81a580000000
has_url: http://www.bethyl.com/product/pdf/A300-658A.pdf
recognizes_species: http://msm.eagle-i.net/i/0000012f-2849-3aec-38fa-ed3d80000000
has_immunogenic_material: Epitope specific to REA immobilizd on solid support
has_isotype: IgG
derives_from_organism: Oryctolagus cuniculus
has_antibody_registry_ID: AB_519333
has_catalog_number: A300-658A
has_antibody_target: Prohibitin 2
located_in: Liu Laboratory
recognizes product of gene: 11331
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-06-03T11:29:35.074-05:00
creator: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
modified: 2013-07-11T16:47:02.201-05:00
type: polyclonal antibody reagent

Epitope specific to REA immobilizd on solid support
has_entrez_gene_id: http://www.ncbi.nlm.nih.gov/gene/11331
has_gene_symbol: PHB2
has_gene_symbol: REA
derives_from_organism_or_virus: Homo sapiens
type: immunogenic material

anti-REA
eagle-i_synonym: Rabbit anti-REA
Comments: Recognizes_species Homo sapiens Mus musculus
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc7b-5919-ecc6-81a580000000
has_url: http://www.millipore.com/catalogue/item/07-234
related_technique: western blot analysis
recognizes_species: http://msm.eagle-i.net/i/0000012f-2848-3c9d-38fa-ed3d80000000
recognizes_species: http://msm.eagle-i.net/i/0000012f-2849-3aec-38fa-ed3d80000000
has_immunogenic_material: His-tagged fusion protein corresponding to amino acid residues 88-299 of REA-1/BAP-37/prohibitin-related protein
has_isotype: IgG
derives_from_organism: Oryctolagus cuniculus
has_antibody_registry_ID: AB_310454
has_catalog_number: 07-234
has_antibody_target: REA
related_immunotechnique: western blot analysis
located_in: Liu Laboratory
recognizes product of gene: 11331
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-06-03T11:32:39.441-05:00
creator: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
modified: 2013-07-11T16:47:35.946-05:00
type: polyclonal antibody reagent

His-tagged fusion protein corresponding to amino acid residues 88-299 of REA-1/BAP-37/prohibitin-related protein
has_entrez_gene_id: 12034
has_gene_symbol: Phb2
type: immunogenic material

anti-Prohibitin
resource_description: Mitochondrial marker.
eagle-i_synonym: Mouse anti-rat Prohibitin
Comments: Recognizes_species Homo sapiens Mus musculus
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc86-3932-ecc6-81a580000000
has_inventory_number: Thermo Scientific catalog #: MS-261-P0
has_url: http://www.thermoscientific.com/ecomm/servlet/productsdetail?productId=11954112&groupType=PRODUCT&searchType=0&storeId=11152
recognizes_species: http://msm.eagle-i.net/i/0000012f-2848-3c9d-38fa-ed3d80000000
recognizes_species: http://msm.eagle-i.net/i/0000012f-2849-3aec-38fa-ed3d80000000
has_immunogenic_material: Purified recombinant rat prohibitin protein
has_isotype: IgG1
derives_from_organism: Mus musculus
has_antibody_registry_ID: AB_10013420
has_clone_ID: II-14-10
has_catalog_number: MS-261-P0
has_antibody_target: Prohibitin
located_in: Liu Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-06-03T11:34:57.028-05:00
creator: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
modified: 2013-07-11T16:45:23.620-05:00
type: monoclonal antibody reagent

Purified recombinant rat prohibitin protein
has_entrez_gene_id: 25344
has_gene_symbol: Phb
type: immunogenic material

anti-C/EBPβ
eagle-i_synonym: Rabbit anti-human LAP
Comments: Recognizes_species Homo sapiens Mus musculus
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc6d-65d0-ecc6-81a580000000
has_url: http://www.cellsignal.com/pdf/3087.pdf
related_technique: western blot analysis
recognizes_species: http://msm.eagle-i.net/i/0000012f-2848-3c9d-38fa-ed3d80000000
recognizes_species: http://msm.eagle-i.net/i/0000012f-2849-3aec-38fa-ed3d80000000
has_immunogenic_material: Synthetic peptide (KLH-coupled) corresponding to amino-terminal sequence of human C/EBPβ
derives_from_organism: Oryctolagus cuniculus
has_antibody_registry_ID: AB_330689
has_catalog_number: 3087
has_antibody_target: C/EBPβ
related_immunotechnique: western blot analysis
located_in: Liu Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-06-03T11:38:49.548-05:00
creator: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
modified: 2013-07-11T16:28:03.629-05:00
type: polyclonal antibody reagent

Synthetic peptide (KLH-coupled) corresponding to amino-terminal sequence of human C/EBPβ
type: immunogenic material

anti-von Willebrand Factor
eagle-i_synonym: Mouse anti-human vWF
eagle-i_synonym: Mouse anti-human von Willebrand Factor
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc66-7fce-ecc6-81a580000000
has_inventory_number: Abcam catalog #: ab20435
has_url: http://www.abcam.com/Von-Willebrand-Factor-antibody-4F9-ab20435.html
related_technique: flow cytometry assay
recognizes_species: http://msm.eagle-i.net/i/0000012f-2849-3aec-38fa-ed3d80000000
has_immunogenic_material: FVII: C/vWF complex (denatured)
has_isotype: IgG1
derives_from_organism: Mus musculus
has_antibody_registry_ID: AB_445577
has_clone_ID: 4F9
has_catalog_number: ab20435
has_antibody_target: von Willebrand Factor
related_immunotechnique: flow cytometry assay
curator note: Recognizes_species Homo sapiens
located_in: Liu Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-06-03T11:49:31.976-05:00
creator: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
modified: 2013-07-11T16:50:05.327-05:00
type: monoclonal antibody reagent

FVII: C/vWF complex (denatured)
has_entrez_gene_id: 7450
type: immunogenic material

anti-CD31
eagle-i_synonym: Mouse anti-human CD31
Comments: Recognizes_species Homo sapiens
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc66-7fce-ecc6-81a580000000
has_inventory_number: Abcam catalog #: ab79014
has_url: http://www.abcam.com/CD31-antibody-HC1-6-ab79014.html
related_technique: flow cytometry assay
recognizes_species: http://msm.eagle-i.net/i/0000012f-2849-3aec-38fa-ed3d80000000
has_immunogenic_material: PMA treated U937 cells
has_isotype: IgG1
derives_from_organism: Mus musculus
has_antibody_registry_ID: AB_1603155
has_catalog_number: ab79014
has_antibody_target: CD31
related_immunotechnique: flow cytometry assay
located_in: Liu Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-06-03T11:50:53.014-05:00
creator: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
modified: 2013-07-11T16:23:42.302-05:00
type: monoclonal antibody reagent

PMA treated U937 cells
type: immunogenic material

anti-TATA binding protein
eagle-i_synonym: Mouse anti-human TATA binding protein
eagle-i_synonym: Mouse anti-human TBP
Comments: Recognizes_species Homo sapiens Mus musculus Rattus norvegicus
workflow state: Published
has_url: http://www.abcam.com/TATA-binding-protein-TBP-antibody-1TBP18-Nuclear-Loading-Control-and-ChIP-Grade-ab818.html
related_technique: western blot analysis
recognizes_species: http://msm.eagle-i.net/i/0000012f-2848-3c9d-38fa-ed3d80000000
recognizes_species: http://msm.eagle-i.net/i/0000012f-2849-3aec-38fa-ed3d80000000
recognizes_species: http://msm.eagle-i.net/i/00000130-565b-b8e0-92f1-503b80000000
has_immunogenic_material: Synthetic peptide (human)
has_isotype: IgG1
derives_from_organism: Mus musculus
has_antibody_registry_ID: AB_306337
has_clone_ID: 1TBP18
has_catalog_number: ab818
has_antibody_target: TATA binding protein
related_immunotechnique: western blot analysis
located_in: Liu Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-06-03T11:52:43.053-05:00
creator: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
modified: 2013-07-11T16:19:34.346-05:00
type: monoclonal antibody reagent

Synthetic peptide (human)
type: immunogenic material

anti-VDAC/Porin
resource_description: Mitochondrial marker.
eagle-i_synonym: Mouse anti-human VDAC/Porin
Comments: Recognizes_species Homo sapiens
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc66-7fce-ecc6-81a580000000
related_technique: western blot analysis
recognizes_species: http://msm.eagle-i.net/i/0000012f-2849-3aec-38fa-ed3d80000000
has_immunogenic_material: Recombinant fragment (human) (N-terminal). Porin 31HL from EBV-transformed human B-lymphocytes was used as the immunogen.
has_isotype: IgG2b
derives_from_organism: Mus musculus
has_antibody_registry_ID: AB_ 2214783
has_catalog_number: ab16816
has_antibody_target: VDAC/Porin
related_immunotechnique: western blot analysis
located_in: Liu Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-06-03T11:55:17.790-05:00
creator: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
modified: 2013-07-11T16:49:40.432-05:00
type: monoclonal antibody reagent

Recombinant fragment (human) (N-terminal). Porin 31HL from EBV-transformed human B-lymphocytes was used as the immunogen.
has_entrez_gene_id: 7416
has_gene_symbol: VDAC1
type: immunogenic material

anti-REA
eagle-i_synonym: Rabbit anti-REA
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc66-7fce-ecc6-81a580000000
has_inventory_number: Abcam catalog #: ab18305
related_technique: western blot analysis
recognizes_species: http://msm.eagle-i.net/i/0000012f-2848-3c9d-38fa-ed3d80000000
recognizes_species: http://msm.eagle-i.net/i/0000012f-2849-3aec-38fa-ed3d80000000
has_immunogenic_material: Recombinant fragment (C terminal)
derives_from_organism: Oryctolagus cuniculus
has_antibody_registry_ID: AB_444401
has_catalog_number: ab18305
has_antibody_target: REA
related_immunotechnique: western blot analysis
curator note: Recognizes_species Homo sapiens Mus musculus
located_in: Liu Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-06-03T11:56:46.013-05:00
creator: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
modified: 2013-07-11T16:48:09.336-05:00
type: polyclonal antibody reagent

Recombinant fragment (C terminal)
type: immunogenic material

anti-HIF1 alpha
eagle-i_synonym: Mouse anti-human HAalpha67
eagle-i_synonym: Mouse anti-human HIF1 alpha
Comments: Recognizes_species Homo sapiens Mus musculus
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc66-7fce-ecc6-81a580000000
has_url: http://www.abcam.com/HIF1-alpha-antibody-H1alpha67-ab1.html
related_technique: western blot analysis
recognizes_species: http://msm.eagle-i.net/i/0000012f-2848-3c9d-38fa-ed3d80000000
recognizes_species: http://msm.eagle-i.net/i/0000012f-2849-3aec-38fa-ed3d80000000
has_immunogenic_material: Fusion protein corresponding to amino acids 432-528 of HIF1 alpha
has_isotype: IgG2b
derives_from_organism: Mus musculus
has_antibody_registry_ID: AB_296474
has_catalog_number: ab1
has_antibody_target: HIF1 alpha
related_immunotechnique: western blot analysis
located_in: Liu Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-06-03T11:59:21.581-05:00
creator: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
modified: 2013-07-11T16:39:56.510-05:00
type: monoclonal antibody reagent

Fusion protein corresponding to amino acids 432-528 of HIF1 alpha
has_entrez_gene_id: 3091
has_gene_symbol: HIF1A
type: immunogenic material

anti-Cytochrome C
eagle-i_synonym: Mouse anti-human Cytochrome C
Comments: Recognizes_species Bovine Homo sapiens Mus musculus Rattus norvegicus
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc76-b0b4-ecc6-81a580000000
has_inventory_number: Invitrogen catalog #: 456100
has_url: http://tools.invitrogen.com/content/sfs/manuals/PI456100_Anti-Cytochrome%20C%20Monoclonal%20Antibody%20Rev%201008.pdf
related_technique: immunocytochemistry
related_technique: western blot analysis
recognizes_species: http://msm.eagle-i.net/i/0000012f-2848-3c9d-38fa-ed3d80000000
recognizes_species: http://msm.eagle-i.net/i/0000012f-2849-3aec-38fa-ed3d80000000
recognizes_species: http://msm.eagle-i.net/i/00000130-4e4b-09e4-92f1-503b80000000
recognizes_species: http://msm.eagle-i.net/i/00000130-565b-b8e0-92f1-503b80000000
has_isotype: IgG2a
derives_from_organism: Mus musculus
has_antibody_registry_ID: AB_1500538
has_catalog_number: 456100
has_antibody_target: Cytochrome C
related_immunotechnique: immunocytochemistry
related_immunotechnique: western blot analysis
located_in: Liu Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-06-03T12:08:27.222-05:00
creator: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
modified: 2013-07-11T16:14:22.911-05:00
type: monoclonal antibody reagent

anti-HSP90α/β (H-114)
eagle-i_synonym: Rabbit anti-human HSP90α/β (H-114)
Comments: Recognizes_species Homo sapiens Mus musculus Rattus norvegicus
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc82-0c5e-ecc6-81a580000000
has_inventory_number: Santa Cruz Biotechnology catalog #: sc-7947
has_url: http://datasheets.scbt.com/sc-7947.pdf
related_technique: western blot analysis
recognizes_species: http://msm.eagle-i.net/i/0000012f-2848-3c9d-38fa-ed3d80000000
recognizes_species: http://msm.eagle-i.net/i/0000012f-2849-3aec-38fa-ed3d80000000
recognizes_species: http://msm.eagle-i.net/i/00000130-565b-b8e0-92f1-503b80000000
has_immunogenic_material: HSP 90β amino acids 610-723 at the C-terminus
has_immunogenic_material: raised against amino acids 610-723 mapping at the C-terminus of HSP 90β of human origin
has_isotype: IgG
derives_from_organism: Oryctolagus cuniculus
has_antibody_registry_ID: AB_2121233
has_catalog_number: sc-7947
has_antibody_target: HSP90α/β
related_immunotechnique: western blot analysis
located_in: Liu Laboratory
contributor: http://msm.eagle-i.net/i/00000129-f7a5-d105-12d7-b32980000000
contributor: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
created: 2011-06-03T12:17:38.309-05:00
creator: http://msm.eagle-i.net/i/0000012b-2187-209b-353c-df7f80000000
modified: 2013-07-11T16:18:53.215-05:00
type: polyclonal antibody reagent

HSP 90β amino acids 610-723 at the C-terminus
has_entrez_gene_id: 3326
has_gene_symbol: HSP90AB1
type: immunogenic material

BAP37
recognizes_species: Homo sapiens
recognizes_species: Mus musculus
target_subregion: C-terminus
type: protein target

Recombinant (partial) BAP37, C-terminal
type: immunogenic material

HSP90α/β
has_entrez_gene_id: 3326
recognizes_species: Homo sapiens
recognizes_species: Mus musculus
recognizes_species: Rattus norvegicus
has_gene_symbol: HSP90AB1
target_subregion: C-terminus
type: protein target

raised against amino acids 610-723 mapping at the C-terminus of HSP 90β of human origin
has_entrez_gene_id: 3326
has_gene_symbol: HSP90AB1
type: immunogenic material

Cytochrome C
recognizes_species: Bos taurus
recognizes_species: Caenorhabditis elegans
recognizes_species: Dictyostelium discoideum
recognizes_species: Homo sapiens
recognizes_species: Mus musculus
recognizes_species: Rattus norvegicus
type: protein target

HIF1 alpha
has_entrez_gene_id: 3091
recognizes_species: Homo sapiens
type: protein target

REA
recognizes_species: Homo sapiens
recognizes_species: Mus musculus
type: protein target

VDAC/Porin
recognizes_species: http://msm.eagle-i.net/i/0000012f-2849-3aec-38fa-ed3d80000000
type: protein target

TATA binding protein
has_entrez_gene_id: 6908
recognizes_species: Homo sapiens
recognizes_species: Mus musculus
recognizes_species: Rattus norvegicus
has_gene_symbol: TBP
target_subregion: Epitope within amino acid residues 1-20 of human, mouse and rat TBP. The specific epitope for this antibody is accessible when the C-terminal domain of TBP is removed or when TBP is complexed with DNA.
species_non_reactivity: Caenorhabditis elegans
species_non_reactivity: Drosophila melanogaster
species_non_reactivity: Saccharomyces cerevisiae
species_non_reactivity: Xenopus laevis
type: protein target

CD31
has_entrez_gene_id: 5175
recognizes_species: Homo sapiens
target_subregion: Domains 3-6 of human CD31.
type: protein target

von Willebrand Factor
has_entrez_gene_id: 7450
recognizes_species: Homo sapiens
has_gene_symbol: vWF
type: protein target

C/EBPβ
has_entrez_gene_id: http://www.ncbi.nlm.nih.gov/gene/1051
recognizes_species: Homo sapiens
recognizes_species: Mus musculus
has_gene_symbol: CEBPB
type: protein target

Prohibitin
has_entrez_gene_id: 25344
recognizes_species: Homo sapiens
recognizes_species: Mus musculus
has_gene_symbol: Phb
type: protein target

REA
has_entrez_gene_id: 11331
has_entrez_gene_id: 12034
recognizes_species: Homo sapiens
recognizes_species: Mus musculus
type: protein target

Prohibitin 2
has_entrez_gene_id: http://www.ncbi.nlm.nih.gov/gene/11331
recognizes_species: Homo sapiens
has_gene_symbol: PHB2
has_gene_symbol: REA
type: protein target

PPARγ
has_entrez_gene_id: 5468
recognizes_species: Homo sapiens
recognizes_species: Mus musculus
type: protein target

Smooth Muscle Myosin IgG
type: protein target

PSR-45 to Phosphoserine
type: chemical target

Cardiac Troponin 1
has_entrez_gene_id: 7134
recognizes_species: Homo sapiens
type: protein target

GATA-4
has_entrez_gene_id: 2626
recognizes_species: Homo sapiens
recognizes_species: Mus musculus
type: protein target

Histone H3
recognizes_species: Homo sapiens
target_modification: Dimethyl histone
target_subregion: Lys79
type: protein target

cdc2
has_entrez_gene_id: 983
recognizes_species: Homo sapiens
recognizes_species: Mus musculus
has_gene_symbol: CDK1
type: protein target

β-Actin
has_entrez_gene_id: 11461
recognizes_species: Homo sapiens
recognizes_species: Mus musculus
has_gene_symbol: Actb
type: protein target

Caspase 3, active (cleaved) form
has_entrez_gene_id: http://www.ncbi.nlm.nih.gov/gene/100008840
recognizes_species: Homo sapiens
recognizes_species: Mus musculus
recognizes_species: Oryctolagus cuniculus
has_gene_symbol: CASP3
type: protein target

Cyclin D1
has_entrez_gene_id: http://www.ncbi.nlm.nih.gov/gene/595
recognizes_species: Homo sapiens
has_gene_symbol: CCND1
type: protein target

Histone H3
has_entrez_gene_id: http://www.ncbi.nlm.nih.gov/gene/8290
recognizes_species: Homo sapiens
has_gene_symbol: HIST3H3
target_modification: dimethyl
target_subregion: Lys 79
type: protein target

Histone H3
has_entrez_gene_id: http://www.ncbi.nlm.nih.gov/gene/8290
has_gene_symbol: HIST3H3
target_modification: Dimethyl
target_subregion: Lys79
type: protein target

E2F transcription factor 1
has_entrez_gene_id: http://www.ncbi.nlm.nih.gov/gene/1869
recognizes_species: Homo sapiens
has_gene_symbol: E2F1
target_subregion: N-terminal region of human E2F1 (aa 1-89).
type: protein target

FLAG
has_sequence: DYKDDDDK
type: protein target

V5
has_sequence: GKPIPNPLLGLDST
type: protein target

Iroquois homeobox protein 1
has_entrez_gene_id: http://www.ncbi.nlm.nih.gov/gene/79192
recognizes_species: Homo sapiens
has_gene_symbol: IRX1
target_subregion: N-terminus
type: protein target

Iroquois homeobox 4
recognizes_species: Homo sapiens
recognizes_species: Mus musculus
has_gene_symbol: Irx4
type: protein target

Iroquois homeobox protein 5
has_entrez_gene_id: http://www.ncbi.nlm.nih.gov/gene/10265
recognizes_species: Homo sapiens
has_gene_symbol: IRX5
type: protein target

Retinoblastoma Associated Protein
has_entrez_gene_id: http://www.ncbi.nlm.nih.gov/gene/5925
recognizes_species: Homo sapiens
recognizes_species: Mus musculus
has_gene_symbol: RB1
target_modification: Phosphorylation
target_subregion: Ser807/822
type: protein target

Phosphorylated serine
type: chemical target

Phospho-serine conjugated to KLH
type: immunogenic material

Retinoblastoma 1
has_entrez_gene_id: http://www.ncbi.nlm.nih.gov/gene/19645
has_entrez_gene_id: http://www.ncbi.nlm.nih.gov/gene/5925
recognizes_species: Homo sapiens
recognizes_species: Mus musculus
has_gene_symbol: RB1
type: protein target

T-box 5
has_entrez_gene_id: http://www.ncbi.nlm.nih.gov/gene/6910
recognizes_species: Homo sapiens
recognizes_species: Mus musculus
has_gene_symbol: TBX5
type: protein target

PDCD6IP programmed cell death 6 interacting protein
has_entrez_gene_id: http://www.ncbi.nlm.nih.gov/gene/10015
recognizes_species: Homo sapiens
has_gene_symbol: PDC6I
type: protein target

Hypoxia inducible factor 1, alpha subunit
has_entrez_gene_id: http://www.ncbi.nlm.nih.gov/gene/3091
recognizes_species: Gallus gallus
recognizes_species: Homo sapiens
has_gene_symbol: HIF1A
type: protein target

Expresses firefly luciferace in all regions of endogenous period 2 expression
type: phenotypic annotation

C57Bl/6
type: phenotypic annotation

25-30% ganglion cells die out by 18months of age
type: phenotypic annotation

Gene Profiling Core
resource_description: The RCMI Gene Profiling Core provides a variety of services related to analysis of gene expression, which includes genome and transcriptome analysis. Laboratories in the Gene Profiling Core include Functional Genomics, Gene Variation and DNA Sequencing labs. The DNA Sequencing Lab provides both DNA sequence and fragment analysis of a variety of DNA templates, including genomic DNA, PCR amplicons and plasmid or cosmid constructs. The lab uses capillary electrophoresis sequencing technology and is built around the ABI 3130xl Gene Analyzer (16-capillary) and associated software for DNA sequence analysis. The Functional Genomics Lab provides microarray services for research investigators using glass slide technology platforms. We are an Agilent Certified Core facility and a member of the Association of Biomolecular Research Core Facilities (ABRF). Specifically we provide assistance, or full services, from RNA isolation to scanning hybridized microarrays and raw data extraction. In conjunction with the Biomedical Informatics Unit (BIU) at MSM, we provide full services in the analyses of ‘-omics’ datasets. We support all microarray products from Agilent as well as any other array company that utilizes uncoated glass slide technologies. We also provide consultative services for custom microarray design. The Gene Variation Core Lab assists investigators in application of genomic technologies to population-based research. The strategic plan is to create a link between basic science, clinical investigation and population-based research. The central hypothesis is that health disparities are related in part to ethnicity-specific DNA variants in critical genes that influence the susceptibility to common diseases. Accordingly, the major objective of the lab is to enhance health disparities research capacity at the molecular genetic level based on cutting-edge genomic technologies. For more information about Gene Profiling Core services contact the individuals listed here or click[cell cut: 2542 characters, first 2000 kept]
workflow state: Published
has_affiliation: DNA Sequencing Laboratory
has_affiliation: Gene Variation Core Laboratory
has_affiliation: Functional Genomics Core Laboratory
contributor: http://msm.eagle-i.net/i/00000142-c445-189b-c468-451580000000
created: 2013-12-04T08:54:04.395-06:00
creator: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
modified: 2014-04-25T13:24:15.019-05:00
type: Core Laboratory

DNA Quantification
Fee for service: true
has add access: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
has remove access: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
workflow state: Published
has_contact: Roth, William
has_contact: Yang, Qi
service_provided_by: DNA Sequencing Laboratory
contributor: http://msm.eagle-i.net/i/0000012e-c4aa-10b4-aeaf-df9880000000
created: 2013-12-04T09:17:37.338-06:00
creator: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
modified: 2014-04-29T11:38:53.863-05:00
type: service offering

Tongge Zhu, Ph.D.
eagle-i_synonym: http://t1t2.rtrn.net/profileswebroot/ProfileDetails.aspx?From=SE&Person=63369&PersonSource=Morehouse%20School%20of%20Medicine
has add access: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
has remove access: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
workflow state: Published
contact_email: tzhu@msm.edu
first_name: Tongge
last_name: Zhu
phone_number: 404-752-1968
performs: image acquisition and analysis
contributor: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
created: 2013-12-04T12:35:04.069-06:00
creator: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
modified: 2013-12-04T12:57:37.965-06:00
type: person

Luminex Laboratory
resource_description: The Luminex Laboratory has Bio-Plex 200 and MagPix multiplex plate readers. These instruments allow simultaneous analytical measurement of multiple protein biomarkers using bead-linked assays. This provides for exquisite sensitivity, specificity, and precise measurements of analytes in small sample volumes. The lab also offers 2D Gel services. The lab houses a BioRad automated spot picker (Proteome Works) and a BioRad gel imager (Molecular imagerFX). Bundled with this package is the latest version of PDQuest 8.0 for analysis of expression data from gels. Together this equipment allows us to offer services such as protein identification and analysis of protein modifications. This service complements LC/MS/MS analysis offered in the roteomics Lab. Services include: 1. Multiplex Immunoassays 2. QuantiGene Multiplex Assays 3. 2D Gel analysis Equipment/Technology 1. Luminex Bio-Plex 200, and MagPix readers 2. Bio-Plex Manager 6.0 3. BioRad 2D gel insruments 4. PD Quest 8.0 Service Fee $ 200.00 per assay plate (Bioplex) 2D Gel Service by consultation
eagle-i_synonym: Protein Profiling / 2D Gel Lab
workflow state: Published
has_contact: Jane Chu
mailing_address: Morehouse School of Medicine Luminex Service MEB C235 720 Westview Drive, SW Atlanta, GA 30310
contact_email: jchu@msm.edu
contact_email: mpowell@msm.edu
contact_email: wthompson@msm.edu
phone_number: 404-752-8469
lab_delivery_address: Research Core Facility, Room C-235, Medical Education Building 720 Westview Drive, SW Atlanta, GA 30310
has_affiliation: Analytical Chemistry & Protein Profiling Core
performs: multiplex bead assay
has_director: Powell, Michael D., Ph.D.
has_co-PI: http://msm.eagle-i.net/i/00000144-d06f-20cf-6f9f-8be680000000
contributor: http://msm.eagle-i.net/i/00000142-c445-189b-c468-451580000000
created: 2013-12-04T14:52:52.863-06:00
creator: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
modified: 2014-04-28T10:10:13.146-05:00
type: Core Laboratory

William Seffens, Ph.D.
resource_description: Computational Biology
has add access: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
has remove access: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
workflow state: Published
mailing_address: Physiology Dept. 720 Westview Dr. S.W. Atlanta, GA 30310
contact_email: wseffens@msm.edu
first_name: William
last_name: Seffens
phone_number: 404-752-1683
contributor: http://msm.eagle-i.net/i/00000142-c445-189b-c468-451580000000
created: 2013-12-04T15:13:48.624-06:00
creator: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
modified: 2014-04-25T13:25:29.561-05:00
type: person

Zebrafish Biology Core Facility
resource_description: The Zebrafish Lab offers the combination of low cost, rapid in vivo analysis and complex vertebrate biology. Zebrafish are closer to humans evolutionarily than yeast or insects or worms and experiments are faster and less costly than those using mice. This model system supports research in many research areas, including molecular genetics of cardiac development, heart disease, neurogenetics, cell signaling pathways, and genetics of cancer prevention, and is an excellent teaching tool to support research training programs. Service Charges: The Zebrafish Lab will provide consultative and fee for services to basic, translational and clinical investigators; for example, animal husbandry, embryo DNA microinjection, generation of transgenic models, morpholino knockdown, in vivo chemical screening strategies, and other custom services, as needed. All services are charged on an hour-by-hour consultation basis. For more information, please contact the core leader directly.
eagle-i_synonym: Zebrafish Lab
workflow state: Published
has_contact: Anderson, Leonard, Ph.D.
has_PI: Anderson, Leonard, Ph.D.
mailing_address: Room D-210, Research Wing 720 Westview Dr, SW Atlanta GA 30310-1495
contact_email: landerson@msm.edu
phone_number: (404) 756-8921
lab_delivery_address: Room C-223, Medical Education Building 720 Westview Dr, SW Atlanta GA 30310-1495
has_affiliation: Biological Manipulation Core
has_director: Anderson, Leonard, Ph.D.
contributor: http://msm.eagle-i.net/i/00000142-c445-189b-c468-451580000000
created: 2013-12-04T15:46:20.600-06:00
creator: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
modified: 2014-04-25T13:27:36.067-05:00
type: Core Laboratory

Biological Manipulation Core
resource_description: The Biological Manipulation Core offers model systems for manipulation and analysis of gene expression. Laboratories within this core include: A. Microvesicle Lab This Lab offers technical expertise in isolation and purification of Microvesicles, and in their analysis. This includes expertise in Microvesicle isolation and analysis. Further, this group has developed technology that allows targeted Loading of proteins into micro-vesicles. Microparticles are a very hot current topic, and this biotechnology has cross research focus area potential for both research and therapeutic uses in AIDS/ID, Cancer/Reproduction, Cardiovascular/Metabolic, and Neuroscience. This research area at MSM was originally funded through the HIV group, but quickly was turned into a collaborative, transdisciplinary funded research project through the RCMI T1 ARRA Project which brought together diverse researchers from AIDS/ID, Cancer, Cardiovascular/Metabolic focus areas together into a interacting group. This research area can be a collaborative, transdiciplinary research driver at MSM and across the RTRN. B. Stem Cell Lab The Stem Cell Lab offers consultative service to investigators interested in adult or embryonic stem cell research including induced pluripotent stem cells (iPSCs) from human and various animals. In addition, the lab offers technical expertise for investigators interested in generating preliminary data for grant application or who are funded to perform stem cell work and who can provide reagents. This includes deriving and growing stem cells from bone marrow, adipose tissue, and umbilical cord, growing commercially available adult embryonic stem cells and iPSCs, reprogramming adult tissue cells into pluripotent cells, and differentiating stem cells into various lineages. The lab is constantly developing new techniques that will benefit the research community. Currently, the focus is on establishing techniques for genome editing in iPSCs with the goal of generating human mod[cell cut: 3034 characters, first 2000 kept]
workflow state: Published
has_affiliation: Zebrafish Biology Core Facility
has_affiliation: Microvesicle Core Laboratory Facility
has_affiliation: Stem Cell Core Laboratory
contributor: http://msm.eagle-i.net/i/00000142-c445-189b-c468-451580000000
created: 2013-12-04T15:46:19.587-06:00
creator: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
modified: 2014-04-25T13:27:30.166-05:00
type: Core Laboratory

Microvesicle Core Laboratory Facility
resource_description: This Lab offers technical expertise in isolation and purification of Microvesicles, and in their analysis. Technical Expertise: Dr. Ming Bo Huang, M.D. has formulated expertise through ongoing research in the MSM HIV Nef Pathogenesis Group. Dr. Huang has developed expertise in Microvesicle isolation and analysis. Further, this group has developed technology that allows targeted Loading of proteins into micro-vesicles. Microparticles are a very hot current topic, and this biotechnology has cross research focus area potential for both research and therapeutic uses in AIDS/ID, Cancer/Reproduction, Cardiovascular/Metabolic, and Neuroscience. This research area at MSM was originally funded through the HIV group, but quickly was turned into a collaborative, transdisciplinary funded research project through the RCMI T1 ARRA Project which brought together diverse researchers from AIDS/ID, Cancer, Cardiovascular/Metabolic focus areas together into a interacting group. This research area can be a collaborative, transdiciplinary research driver at MSM and across the RTRN.
workflow state: Published
has_contact: Ming Bo Huang, M.D.
mailing_address: Morehouse School of Medicine Microbiology, Biochemistry and Immunology HG Building Room B-319/B-321 720 Westview Dr. SW Atlanta, GA 30310
contact_email: mhuang@msm.edu
phone_number: 404-752-1861
lab_delivery_address: Medical Education Building Room C-212 Morehouse School of Medicine 720 Westview Dr. SW Atlanta, GA 30310
has_affiliation: Biological Manipulation Core
has_director: Ming Bo Huang, M.D.
contributor: http://msm.eagle-i.net/i/00000142-c445-189b-c468-451580000000
created: 2013-12-04T15:50:38.075-06:00
creator: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
modified: 2014-04-25T13:27:33.843-05:00
type: Core Laboratory

Ming Bo Huang, M.D.
resource_description: Dr. Huang is Research Instructor in the Department of Microbiology, Biochemistry and Immunology, and is director of the Microvesicle Lab in the Biological Manipulation Core.
workflow state: Published
mailing_address: Room C-321, Gloster Building Microbiology, Biochemistry and Immunology Morehouse School of Medicine 720 Westview Dr SW Atlanta GA 30310-1495
contact_email: mhuang@msm.edu
contributor: http://msm.eagle-i.net/i/00000142-c445-189b-c468-451580000000
created: 2013-12-04T15:50:37.044-06:00
creator: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
modified: 2014-04-28T10:27:44.324-05:00
type: person

Stem Cell Core Laboratory
resource_description: The Stem Cell Lab offers consultative service to investigators interested in adult or embryonic stem cell research including induced pluripotent stem cells (iPSCs) from human and various animals. In addition, the lab offers technical expertise for investigators interested in generating preliminary data for grant application or who are funded to perform stem cell work and who can provide reagents. This includes deriving and growing stem cells from bone marrow, adipose tissue, and umbilical cord, growing commercially available adult embryonic stem cells and iPSCs, reprogramming adult tissue cells into pluripotent cells, and differentiating stem cells into various lineages. The lab is constantly developing new techniques that will benefit the research community. Currently, the focus is on establishing techniques for genome editing in iPSCs with the goal of generating human models of human genetic diseases for translation research.
workflow state: Published
has_contact: Bacanamwo, Methode, Ph.D.
has_contact: Saravanakumar Muthusamy
has_PI: Bacanamwo, Methode, Ph.D.
mailing_address: Room D-204, Research Wing Morehouse School of Medicine 720 Westview Dr, SW Atlanta GA 30310-1495
contact_email: mbacanamwo@msm.edu
contact_email: smuthusamy@msm.edu
phone_number: (404) 752-1159
phone_number: (404)752-1038
lab_delivery_address: Room C-205, Medical Education Building Morehouse School of Medicine 720 Westview Dr, SW Atlanta GA 30310-1495
has_affiliation: Biological Manipulation Core
has_director: Bacanamwo, Methode, Ph.D.
contributor: http://msm.eagle-i.net/i/00000142-c445-189b-c468-451580000000
created: 2013-12-04T15:52:51.709-06:00
creator: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
modified: 2014-04-25T13:27:35.025-05:00
type: Core Laboratory

Jane Chu
resource_description: Ms. Jane Chu is Research Assistant in the Luminex lab, Analytical Chemistry and Protein Profiling Core (ACPP).
workflow state: Published
mailing_address: Morehouse School of Medicine Luminex Service MEB C235 720 Westview Drive, SW Atlanta, GA 30310
contact_email: jchu@msm.edu
first_name: Jane
last_name: Chu
phone_number: (404)-752-8469
performs: multiplex bead assay
contributor: http://msm.eagle-i.net/i/00000142-c445-189b-c468-451580000000
created: 2013-12-05T12:42:17.717-06:00
creator: http://msm.eagle-i.net/i/00000142-b54f-cf50-c468-451580000000
modified: 2014-04-28T10:11:03.321-05:00
type: person

Bio-Plex 200
workflow state: Published
has_contact: Chu, Jane
has_restriction: Yes
related_technique: assay
located_in: Luminex Laboratory
contributor: http://msm.eagle-i.net/i/0000012e-c4aa-10b4-aeaf-df9880000000
created: 2013-12-05T12:58:03.223-06:00
creator: http://msm.eagle-i.net/i/00000142-b54f-cf50-c468-451580000000
modified: 2014-04-29T11:38:47.392-05:00
type: instrument

Bio-Plex assay manual
workflow state: Published
used_by: Luminex Laboratory
contributor: http://msm.eagle-i.net/i/0000012e-c4aa-10b4-aeaf-df9880000000
created: 2013-12-05T12:59:58.871-06:00
creator: http://msm.eagle-i.net/i/00000142-b54f-cf50-c468-451580000000
modified: 2014-04-29T11:57:21.954-05:00
type: protocol

Study Design, Biostatistics, and Data Management Core (SDBDMC)
resource_description: The specific objectives of the Study Design, Biostatistics, and Data Management Core are: 1: To provide consultation in study conceptualization and design, sampling, and sample size planning, statistical analyses planning, statistical analyses methodologies, and epidemiologic principles and methods. 2: To provide biostatistical analysis and data analytical support 3: To provide technical support and consultation in data collection methods, data entry, processing, and management. 4: To provide database administration support in creating and managing databases as shared resources Services provided by the SDBDMC include: Power and sample size calculations, Statistical analysis, Proposal development, Program evaluation, Evaluation plan development, Manuscript preparation, Study design, Survey development, Methodology development, Focus group moderation, Qualitative analysis, Data collection form development, and Database development and management. We have streamlined the assistance request process by developing a web-based research assistance request form. The automated process captures more specifically the type of requests by faculty, staff, and students and allows these "customers" throughout MSM's campus and off site locations easier access the SDBDMC. Click the website link below for assistance.
workflow state: Published
has_contact: Pamela Daniels, MPH, MBA, PhD.
mailing_address: Clinical Research Center Morehouse School of Medicine, 720 Westview Dr., SW, Atlanta GA 30310-1495
phone_number: (404) 756-5714
has_affiliation: Research Center for Clinical and Translational Sciences (R-CENTER)
has_url: http://fs23.formsite.com/pdaniels1/biostatrequestform/index.html
has_url: https://rcenterportal.msm.edu/node/153
has_director: Robert M. Mayberry, MS, MPH, Ph.D.
has_secondary_affiliation: Research Centers in Minority Institutions (RCMI), Morehouse School Of Medicine
has_organization_member: Wonsuk Yoo, PhD.
has_organization_member: Fengxia Yan, MD, MS.
contributor: http://msm.eagle-i.net/i/00000142-c445-189b-c468-451580000000
created: 2013-12-05T12:59:32.739-06:00
creator: http://msm.eagle-i.net/i/00000142-b552-dd3e-c468-451580000000
modified: 2014-04-28T10:33:40.153-05:00
type: Core Laboratory

Bio-Plex manager 6.0
workflow state: Published
has_contact: Jane Chu
used_by: Luminex Laboratory
contributor: http://msm.eagle-i.net/i/0000012e-c4aa-10b4-aeaf-df9880000000
created: 2013-12-05T13:00:48.756-06:00
creator: http://msm.eagle-i.net/i/00000142-b54f-cf50-c468-451580000000
modified: 2014-04-29T11:38:48.554-05:00
type: software

Multiplex assay kit
workflow state: Published
has_contact: Chu, Jane
located_in: Luminex Laboratory
contributor: http://msm.eagle-i.net/i/0000012e-c4aa-10b4-aeaf-df9880000000
created: 2013-12-05T13:02:41.430-06:00
creator: http://msm.eagle-i.net/i/00000142-b54f-cf50-c468-451580000000
modified: 2014-04-29T11:38:50.419-05:00
type: reagent

Beckman Coulter Avanti J-26XPI Centrifuge
workflow state: Published
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc6a-37eb-ecc6-81a580000000
has_restriction: None
model_number: Avanti J-26XPI
related_technique: centrifugation
located_in: Biomedical Technology Service Core Laboratory
contributor: http://msm.eagle-i.net/i/0000012e-c4aa-10b4-aeaf-df9880000000
created: 2013-12-05T13:19:17.208-06:00
creator: http://msm.eagle-i.net/i/00000142-b550-ec0b-c468-451580000000
modified: 2014-04-29T11:38:55.129-05:00
type: centrifuge

Hummer Sputtering System
resource_description: Specimen Coater for Scanning Electron Imaging
eagle-i_synonym: Sputter Coater
workflow state: Published
has_contact: Brako, Lawrence
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc68-2bd9-ecc6-81a580000000
located_in: Electron Microscopy Laboratory
contributor: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
created: 2013-12-05T13:08:45.236-06:00
creator: http://msm.eagle-i.net/i/00000142-b551-f4ae-c468-451580000000
modified: 2013-12-13T08:53:39.402-06:00
type: instrument

Bio-Plex, Milliplex and Procarta
workflow state: Published
has_contact: Chu, Jane
used_by: Luminex Laboratory
has_author: Chu, Jane
contributor: http://msm.eagle-i.net/i/0000012e-c4aa-10b4-aeaf-df9880000000
created: 2013-12-05T13:09:19.962-06:00
creator: http://msm.eagle-i.net/i/00000142-b54f-cf50-c468-451580000000
modified: 2014-04-29T11:38:56.439-05:00
type: protocol

Ultramicrotome RMC MT-7
resource_description: Equipment for cutting and trimming sections from cured resin blocks
has add access: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
has remove access: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
workflow state: Published
has_contact: Brako, Lawrence
model_number: RMC MT-7
located_in: Electron Microscopy Laboratory
contributor: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
created: 2013-12-05T13:13:47.610-06:00
creator: http://msm.eagle-i.net/i/00000142-b551-f4ae-c468-451580000000
modified: 2013-12-13T08:55:18.306-06:00
type: microtome

Tousimis Critical Point Dryer
resource_description: Equipment for drying biological specimens for Scanning Electron Imaging
eagle-i_synonym: Samdri-795
workflow state: Published
has_contact: Brako, Lawrence
has_manufacturer: http://global.eagle-i.net/i/0000013d-bc86-d8b7-ecc6-81a580000000
model_number: Samdri-795
located_in: Electron Microscopy Laboratory
contributor: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
created: 2013-12-05T13:17:56.020-06:00
creator: http://msm.eagle-i.net/i/00000142-b551-f4ae-c468-451580000000
modified: 2013-12-13T08:54:05.869-06:00
type: critical point dryer

Cell Culture Supernatant, Plasma, Urine; Microparticles and Exosomeses.
workflow state: Published
located_in: Microvesicle Core Laboratory Facility
contributor: http://msm.eagle-i.net/i/0000012e-c4aa-10b4-aeaf-df9880000000
created: 2013-12-05T13:25:50.392-06:00
creator: http://msm.eagle-i.net/i/00000142-b551-62e3-c468-451580000000
modified: 2014-04-29T11:38:58.273-05:00
type: biological specimen

Nanosight LM10-HSBF Nanoparticle Characterization System
resource_description: Major Equipment 1. Beckman Allegra X-15R Tabletop Centrifuge (Rotor: FX6100) 2. Beckman Optima TLX Ultracentrifuge (Rotors: TLA-100.4, TLA-120.2) 3. Beckman Optima Max-XP Ultracentrifuge (Rotors: TLA-100.4, TLA-120.2) 4. Beckman L8M-80 Ultracentrifuge (Rotors: 50.2Ti, 42.1 Ti) Special Equipment: Nanosight LM10-HSBF Nanoparticle Characterization System. Introduction I. Basic Principles Within a specially designed and constructed laser illumination device mounted under a microscope objective, particles in the liquid sample which pass through a beam path are seen by the instrument as small points of light moving rapidly under Brownian motion. The Microvesicle core Nanosight has the visual laser and measures (i) particle/vesicle size, and (ii) particle/vesicle number. II. Nanoparticle Tracking Analysis (NTA) applied to the study of microvesicles Microvesicles (100nm-1µm diameter) and exosomes (30 to 100 nm diameter) are small membrane vesicles secreted by most cell types, e.g. normal, diseased, and neoplastic cells and are present in blood and other bodily fluids. They contain a variety of molecules including signal peptides, mRNA, microRNA. It is significance in the development of vaccines, in targeting tumors, and in diagnosis and/or early detection. These microvesicles are a very hot current topic, and this biotechnology has cross research focus area potential for both research and therapeutic uses in AIDS/ID, Cancer/Reproduction, Cardiovascular/Metabolic, and Neuroscience.
workflow state: Published
located_in: Microvesicle Core Laboratory Facility
contributor: http://msm.eagle-i.net/i/0000012e-c4aa-10b4-aeaf-df9880000000
created: 2013-12-05T13:35:37.797-06:00
creator: http://msm.eagle-i.net/i/00000142-b551-62e3-c468-451580000000
modified: 2014-04-29T11:38:52.805-05:00
type: instrument

Services Offered and Data Analysis
resource_description: Services Offered: 1. Isolation and Purification Microparticle or Exosome from Cell Cultures. 2. Isolation and Purification Microparticle or Exosome from Plasma. 3. Isolation and Purification Micropartical or Exosome from Urine. 4. Microparticle or Exosome samples Data Analysis: 1. Microparticle or exosomes pictures (including 3D intensity image) 2. Microparticle or exosomes video (10-90 seconds/sample) 3. Microparticle or exosomes numbers (particle/ml) 4. Microparticle or exosomes size (10nM-1µM)
workflow state: Published
service_provided_by: Microvesicle Core Laboratory Facility
contributor: http://msm.eagle-i.net/i/0000012e-c4aa-10b4-aeaf-df9880000000
created: 2013-12-05T13:38:41.140-06:00
creator: http://msm.eagle-i.net/i/00000142-b551-62e3-c468-451580000000
modified: 2014-04-29T11:38:51.544-05:00
type: service offering

Alexander Quarshie, MD MS
workflow state: Published
mailing_address: 720 Westview Dr. SW Atlanta, GA 30310
contact_email: aquarshie@msm.edu
first_name: Alexander
last_name: Quarshie
phone_number: 404-752-8681
title: Associate Professor, Department of Community Health & Preventive Medicine Director of Biomedical Informatics Unit Associate Director, Master of Science in Clinical Research Program Director, T32 Interdisciplinary Research Training Program in Sleep and Cardiovascular Disorders
contributor: http://msm.eagle-i.net/i/00000142-c445-189b-c468-451580000000
created: 2013-12-05T13:54:07.369-06:00
creator: http://msm.eagle-i.net/i/00000142-b551-f4ae-c468-451580000000
modified: 2014-04-25T13:25:23.947-05:00
type: person

Ernest Alema-Mensah, PhD, D.Min, MS, M.Div.
resource_description: Research Assistant Professor/ Database Administrator
workflow state: Published
mailing_address: 720 Westview Drive S.W. Atlanta, GA 30310
contact_email: eamensah@msm.edu
first_name: Ernest
last_name: Alema-Mensah
phone_number: 404-752-1623
title: Research Assistant Professor/ Database Administrator
contributor: http://msm.eagle-i.net/i/00000142-c445-189b-c468-451580000000
created: 2013-12-05T13:59:19.042-06:00
creator: http://msm.eagle-i.net/i/00000142-b551-f4ae-c468-451580000000
modified: 2014-04-25T13:25:26.417-05:00
type: person

Cell and Tissue Imaging Core
resource_description: "The Cell and Tissue Imaging Facility provides a broad range of services covering many of the major structural methods used to study cells and tissues. The Core consists of four labs: Electron Microscopy, Flow Cytometry and Cell Sorting, Image Analysis, and Molecular Histology." The Electron Microscopy Lab provides complete scanning and transmission services from specimen fixation and dehydration, to examination and documentation via darkroom photography. The Flow CytometryFACS, and Magnetic-bead Cell-sorting Lab houses a BD FACS Aria II and Miltenyi Biotec autoMACS Pro Seperator. Certfied BD- and Miltenyi-trained staff are available for consultation, acquiring data, or sorting cells. The Image Analysis Lab provides a wide variety of options for the analysis and quantification of fluorescent probes, markers and antibodies within fixed and living cells. This lab houses a Leica TCS SP5 Confocal microscope, A DeltaVision Core Deconvolution microscope, a Tecan plate reader and a Zeiss Axioplan upright fluorescent microscope. The Molecular Histology Lab is equipped to provide the following services: paraffin embedding, paraffin sections, frozen sections, immunohisto-chemical and H&E staining, and in situ hybridization." For more information and service charges, contact: Dr. James Lillard Flow Cytometry and Cell Sorting Core Leader Email: jlillard@msm.edu Phone: (404) 752-1863 Dr. Woo-Kuen Lo Electron Microscopy Core Leader Email: wlo@msm.edu Phone: (404) 752-1558 Dr. John Patrickson Molecular Histology Core Leader Email: jpatrickson@msm.edu Phone: (404) 752-5717 Dr. Xuebiao Yao Confocal & Fluorescent Imaging Core Leader Email: xyao@msm.edu Phone: (404) 752-1894
eagle-i_synonym: Cell and Tissue Imaging Facility
workflow state: Published
has_contact: Lo, Woo-Kuen, Ph.D.
has_contact: Patrickson, John
has_contact: Lillard, Jr., James, Ph.D.
has_contact: Xuebiao Yao, Ph.D.
has_affiliation: Image Analysis Core Laboratory
has_affiliation: Research Centers in Minority Institutions (RCMI), Morehouse School Of Medicine
has_affiliation: Electron Microscopy Laboratory
has_affiliation: Molecular Histology Core Laboratory
has_affiliation: Flow Cytometry & Cell Sorting Laboratory
has_url: http://msm.edu/research/research_centersandinstitutes/RCMI/coreFacilities/celltissueimaging.aspx
has_url: http://msm.edu/research/research_centersandinstitutes/RCMI/coreFacilities/celltissueimaging/coreElectron.aspx
has_url: http://msm.edu/research/research_centersandinstitutes/RCMI/coreFacilities/celltissueimaging/coreMolecular.aspx
has_url: http://msm.edu/research/research_centersandinstitutes/RCMI/coreFacilities/celltissueimaging/flowcytometry.aspx
has_url: http://msm.edu/research/research_centersandinstitutes/RCMI/coreFacilities/celltissueimaging/imageanalysislab.aspx
contributor: http://msm.eagle-i.net/i/00000142-c445-189b-c468-451580000000
created: 2013-12-05T13:59:29.627-06:00
creator: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
modified: 2014-04-25T13:20:52.851-05:00
type: Core Laboratory

BIU Computing Infrastructure
resource_description: Currently consists of several rack/blade servers, each equipped with increased memory (96 GB) and hard drive space (18Tb) to house various biomedical/clinical applications capable of 40Gbps data transferring speeds. The servers are running Linux in conjunction with Kernel Based Virtual Machines (KVM) housing several virtual instances of biomedical/clinical databases and applications. A storage solution configuration guaranteeing high availability (HA) of data using a pair of NFS gateway servers in an active-passive configuration to provide resilient data access. The goal is to improve service availability and data integrity in the presence of possible failures or faults, and to maximize performance in the failure-free case. The NFS gateway servers connect multiple storage arrays (231TBs) to provide data access to the virtual machine instances created for clinical databases that are connected to application servers at 40Gbps speed to reduce latency. A high-performance computing (HPC) cluster was built with specialized components providing a fast, reliable, and scalable HPC solution to support processor intensive research. The HPC cluster is equipped with 180 cores and 1.4Tb of Random Access Memory (RAM).
workflow state: Published
located_in: Biomedical Informatics Unit (BIU)
contributor: http://msm.eagle-i.net/i/0000012e-c4aa-10b4-aeaf-df9880000000
created: 2013-12-05T14:34:07.015-06:00
creator: http://msm.eagle-i.net/i/00000142-b551-f4ae-c468-451580000000
modified: 2014-04-29T11:38:46.322-05:00
type: instrument

RNA Isolation
Fee for service: true
resource_description: We offer RNA isolation from cultured cells and tissues.
eagle-i_synonym: Isolation
workflow state: Published
has_contact: Leander-Griffith, Michelle V.
service_provided_by: Functional Genomics Core Laboratory
contributor: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
created: 2013-12-05T15:12:56.511-06:00
creator: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
modified: 2013-12-05T15:13:07.406-06:00
type: service offering

RNA QC
Fee for service: true
resource_description: We measure the integrity of total RNA samples using the Agilent Bioanalyzer. The Agilent Bioanalyzer uses a micro channel based electrophoretic cell that allows rapid and sensitive investigation of nucleic acids.
eagle-i_synonym: Bioanalyzer
workflow state: Published
has_restriction: Trained Personnel
service_provided_by: Functional Genomics Core Laboratory
contributor: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
created: 2013-12-05T15:20:14.354-06:00
creator: http://msm.eagle-i.net/i/00000142-0064-290c-c468-451580000000
modified: 2013-12-05T15:20:33.285-06:00
type: service offering

Helen D. Tyree, BS
workflow state: Published
mailing_address: 720 Westview Drive S.W. Atlanta, GA 30310
contact_email: htyree@msm.edu
phone_number: 404-756-8820
title: Web Portal Informaticist
contributor: http://msm.eagle-i.net/i/00000142-c445-189b-c468-451580000000
created: 2013-12-06T09:15:31.691-06:00
creator: http://msm.eagle-i.net/i/00000142-b551-f4ae-c468-451580000000
modified: 2014-04-25T13:25:27.638-05:00
type: person

Chad Evans
resource_description: Network Administrator
workflow state: Published
mailing_address: Dept of Physiology 720 Westview Drive SW Atlanta, Ga 30310
contact_email: crevans@msm.edu
phone_number: 4047521014
contributor: http://msm.eagle-i.net/i/00000142-c445-189b-c468-451580000000
created: 2013-12-06T09:16:16.388-06:00
creator: http://msm.eagle-i.net/i/00000142-b551-f4ae-c468-451580000000
modified: 2014-04-25T13:25:25.187-05:00
type: person

Afebuameh Ogbesor
workflow state: Published
mailing_address: 720 Westview Dr. SW Atlanta, GA 30310
contact_email: aogbesor
first_name: Afebuameh
last_name: Ogbesor
phone_number: 404-752-1552
title: Database Administrator III
contributor: http://msm.eagle-i.net/i/00000142-c445-189b-c468-451580000000
created: 2013-12-06T09:17:24.154-06:00
creator: http://msm.eagle-i.net/i/00000142-b551-f4ae-c468-451580000000
modified: 2014-04-25T13:25:22.860-05:00
type: person

Bunmi Akinsami
workflow state: Published
mailing_address: 720 Westview Dr. SW Atlanta, GA 30310
contact_email: abunmi@msm.edu
first_name: Akinsami
last_name: Bunmi
phone_number: 404-756-8803
title: Database Administrator III
performs: bioinformatics analysis
contributor: http://msm.eagle-i.net/i/00000142-c445-189b-c468-451580000000
created: 2013-12-06T09:17:52.812-06:00
creator: http://msm.eagle-i.net/i/00000142-b551-f4ae-c468-451580000000
modified: 2014-04-28T09:41:27.208-05:00
type: person

Natasha C. Browner, PhD
workflow state: Published
mailing_address: 720 Westview Dr. SW Atlanta, GA 30310-1495
contact_email: nbrowner@msm.edu
first_name: Natasha
last_name: Browner
phone_number: (404)756-6707
title: Director, Laboratory Services and Research Resources
performs: gene delivery
performs: immunoassay
performs: small molecule screening
contributor: http://msm.eagle-i.net/i/00000142-c445-189b-c468-451580000000
created: 2013-12-06T09:26:23.450-06:00
creator: http://msm.eagle-i.net/i/00000142-be82-baf7-c468-451580000000
modified: 2014-04-25T13:28:34.308-05:00
type: person

Xuebiao Yao, Ph.D.
profiles_url: http://t1t2.rtrn.net/profileswebroot/ProfileDetails.aspx?From=SE&Person=2908&PersonSource=Morehouse%20School%20of%20Medicine
resource_description: Our primary research goal is to study the role of cytochrome P450 (CYP) metabolites in the regulation of vascular and renal function. Obesity and type 2 diabetes not only cause metabolic abnormalities but also markedly affect vascular function, in particular endothelium-dependent agonist-induced vasorelaxation. Prostacyclin, nitric oxide (NO) and endothelium-derived hyperpolarizing factor (EDHF) are the main contributors to the endothelium-dependent vasodilation. Arachidonic acid CYP epoxygenase metabolites, epoxyeicosatrienoic acids (EETs), are potent vasodilators and they are EDHFs in the renal and mesenteric microcirculations. We have recently demonstrated that obesity and type 2 diabetes are associated with a decrease in CYP enzymes in the renal and mesenteric arteries. We are currently examining the regulatory mechanism and functional consequence of CYP metabolites in the development and progression of vascular and renal dysfunction in obesity and diabetes. Aging is another important cardiovascular risk factor. Both morbidity and mortality are dramatically increased when aging process is associated with hypertension and obesity, a frequent pathology in the elderly population. Vascular aging is also mainly characterized by an impaired endothelium-dependent relaxation. A recent study has suggested that not only a defect in the NO pathway, but also a loss of EDHF-mediated responses may be responsible for impaired vasodilation in the aging kidney. We are also interested in studying the specific contribution of CYP metabolites to the regulation of endothelial function in aged kidneys.
workflow state: Published
contact_email: xyao@msm.edu
first_name: Xuebiao
last_name: Yao
phone_number: (404) 752-1894
contributor: http://msm.eagle-i.net/i/00000142-c445-189b-c468-451580000000
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NanoSight NTA 2.3
workflow state: Published
has_contact: Ming Bo Huang, M.D.
used_by: Microvesicle Core Laboratory Facility
contributor: http://msm.eagle-i.net/i/0000012e-c4aa-10b4-aeaf-df9880000000
created: 2013-12-16T13:53:38.939-06:00
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modified: 2014-04-29T11:38:59.449-05:00
type: software

Saravanakumar Muthusamy
resource_description: Laboratory technician in the Stem Cell Laboratory, Biological Manipulation Core
workflow state: Published
mailing_address: Research Wing Room D-217 Cardiovascular Research Institute Morehouse School of Medicine 720 Westview Dr, SW Atlanta GA 30310-1495
contact_email: smuthusamy@msm.edu
first_name: Saravanakumar
last_name: Muthusamy
phone_number: 404.752.1038
title: Lab Technician
performs: maintaining cell culture
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Pamela Daniels, MPH, MBA, PhD.
resource_description: Dr. Daniels is an epidemiologist/sociologist with expertise in study design and methodology, statistical analysis (both qualitative and quantitative), survey development, focus group facilitation, GIS, community engagement, program evaluation, and community intervention planning and implementation. Her primary research interests are in how preexisting social vectors (i.e., race, class, and gender) intersect to increase health disparities in minority populations and the effectiveness of motivational interviewing to reduce the incidence and prevalence of chronic disease; improve health outcomes; promote health behavioral change, and increase health literacy.
workflow state: Published
mailing_address: Clinical Research Center Morehouse School of Medicine, 720 Westview Dr., SW, Atlanta GA 30310-1495
contact_email: pdaniels@msm.edu
first_name: Pamela
last_name: Daniels
phone_number: (404) 752-1878
title: Epidemiologist, CRC
has_url: https://rcenterportal.msm.edu/node/153
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created: 2014-04-25T12:41:38.139-05:00
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modified: 2014-04-28T10:28:09.907-05:00
type: person

Robert M. Mayberry, MS, MPH, Ph.D.
resource_description: Dr. Mayberry is Director of the Biostatistics, Study Design, and Data Management Core, Research Center for Clinical and Translational Sciences (R-CENTER), Morehouse School of Medicine. He is also Professor of Epidemiology), Department of Community Health and Preventive Medicine; Associate Director, Clinical Research Center; and Associate Director, ACTSI (Atlanta Clinical and Translational Sciences) Community Engagement and Research Program. He is the former Director of Health Equity Research, Institute for Health Care Research and Improvement, at Baylor Health Care System (BHCS), Dallas, Texas, and led efforts to better understand variations in care quality by race and ethnicity, socioeconomic status, and other patient characteristics; to improve healthcare quality by implementing evidence-based interventions to eliminate inequities in healthcare; and to integrate scientific findings into clinical decisions and healthcare policy to achieve equitable best care practices. Dr. Mayberry is the former Director of the Program for Healthcare Effectiveness Research, at Morehouse School of Medicine (MSM), where he provided leadership in establishing an infrastructure of researchers, advisors, consultants, and technical research staff to support healthcare effectiveness, outcomes, health services, prevention, and disparities research. These efforts enhanced the infrastructure and current capacity of the MSM Clinical Research Center and the new R-CENTER. Receiving his doctoral training in Epidemiology from the University of California at Berkeley, Dr. Mayberry has significant experience in research, teaching, program planning and evaluation, and policy analysis. He has served in several academic and governmental positions including the Assistant Dean of the Graduate School at the University of South Carolina and Senior Epidemiologist for Minority Health at the Centers for Disease Control and Prevention. He is active in local, state, and national health services and public heal[cell cut: 3320 characters, first 2000 kept]
workflow state: Published
mailing_address: Dept. Community Health and Preventive Medicine Morehouse School of Medicine, 720 Westview Dr., SW, Atlanta GA 30310-1495
contact_email: mayberry@msm.edu
first_name: Robert
last_name: Mayberry
phone_number: (404) 752-1878
title: Associate Director for Research, CHPM
has_url: https://rcenterportal.msm.edu/node/153
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created: 2014-04-25T12:41:40.137-05:00
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modified: 2014-04-28T10:29:20.510-05:00
type: person

Wonsuk Yoo, PhD.
resource_description: Dr. Yoo has extensive range of both collaborative and methodological research experience in health science and medical research. His research is mainly focused on developing biostatistical tools and methodologies that utilize complex and large amount of data to predict the risk of complex human diseases such as Cancer, Cardiovascular Diseases, Diabetes, and Mental disorders. Dr. Yoo is a noted scientist and scholar with many publications in epigenomics, clinical research in cardiovascular disease and cancer, statistical modeling on prediction and early detection, meta-analysis and prediction modeling using scoring system. His research interests include EpiGenomics approach to assess the effects of multiple polymorphisms, Nonparametric data-mining methods for detecting SNPs interactions, Statistical modeling for longitudinal biomarkers on early detection, Genetic risk scores based on patterns of polymorphisms and Meta-analysis.
workflow state: Published
mailing_address: MRC 509 Dept Community Health and Preventive Medicine Morehouse School of Medicine, 720 Westview Dr., SW, Atlanta GA 30310-1495
contact_email: wyoo@msm.edu
first_name: wonsuk
last_name: Yoo
phone_number: 404-756-5215
title: Associate Professor, Biostatistics, Dept. CHPM
has_url: https://rcenterportal.msm.edu/node/153
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created: 2014-04-25T12:41:41.205-05:00
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modified: 2014-04-28T10:30:07.123-05:00
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Fengxia Yan, MD, MS.
resource_description: Dr. Yan is an assistant professor in Biostatistics with strong knowledge of medical science and excellent statistical analysis skill, with expertise in statistical analysis for both survey data and clinical laboratory-based data. Areas of interest include experimental study design, the application of multivariate and hierarchical statistical modeling and database management.
workflow owner: http://msm.eagle-i.net/i/00000142-c445-189b-c468-451580000000
workflow state: Published
mailing_address: Clinical Research Center Morehouse School of Medicine, 720 Westview Dr., SW, Atlanta GA 30310-1495
contact_email: fyan@msm.edu
first_name: Fengxia
last_name: Yan
phone_number: 404-752-1153
title: Assistant Professor, Biostatistician
has_url: https://rcenterportal.msm.edu/node/153
contributor: http://msm.eagle-i.net/i/00000142-c445-189b-c468-451580000000
created: 2014-04-25T12:41:42.467-05:00
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modified: 2014-04-28T10:32:04.523-05:00
type: person

Research Center for Clinical and Translational Sciences (R-CENTER)
resource_description: The overall goal of the Morehouse School of Medicine R-CENTER clinical/translational research web portal is to integrate clinical and translational research information, data and knowledge resources, and provide a single point of entry for researchers across MSM and outside collaborations. The R-CENTER web portal also securely links to both internal and external Clinical and Translational Data Repositories such as i2b2 for collaborative and larger scale research projects and communicates internally and across collaborative research sites. The web-portal provides a secured interface for participants involved in the eHealthyStrides (Microsoft HealthVault project) to interact with the health vault data repository 1. An intuitive user interface where investigators can quickly and easily browse for information 2. A search engine for accurate and precise searches across MSM’s resources 3. Portlet technology that follows national standards (such as JSR 286) that will allow integration into applications and databases 4. Role-based authentication and authorization system to ensure only appropriate individuals have access to the appropriate resources 5. Federation-based authorization (pending) to facilitate collaboration across multiple institutions and work within a multi-institutional consortium
workflow state: Published
has_url: https://rcenterportal.msm.edu/
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created: 2014-04-25T13:01:32.315-05:00
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modified: 2014-04-28T10:30:51.796-05:00
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